RNA–Protein interactions for RNA: ENST00000428774.1

CRIM1-204, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-204ENST00000428774 NISCHQ9Y2I1 1504 aa25.45■■□□□ 1.66
CRIM1-204ENST00000428774 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
CRIM1-204ENST00000428774 ABCC9O60706 1549 aa21.66■■□□□ 1.06
CRIM1-204ENST00000428774 ZCCHC6Q5VYS8 1495 aaKnown RBP21.38■■□□□ 1.01
CRIM1-204ENST00000428774 DCAF1Q9Y4B6 1507 aa21.08■□□□□ 0.96
CRIM1-204ENST00000428774 DCAF8L2P0C7V8 631 aa20.96■□□□□ 0.95
CRIM1-204ENST00000428774 MYO15BQ96JP2 1530 aa20.93■□□□□ 0.94
CRIM1-204ENST00000428774 NACADO15069 1562 aa20.9■□□□□ 0.94
CRIM1-204ENST00000428774 RB1CC1Q8TDY2 1594 aa20.89■□□□□ 0.93
CRIM1-204ENST00000428774 UNC13AQ9UPW8 1703 aa20.62■□□□□ 0.89
CRIM1-204ENST00000428774 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
CRIM1-204ENST00000428774 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
CRIM1-204ENST00000428774 BICRAQ9NZM4 1560 aa20.35■□□□□ 0.85
CRIM1-204ENST00000428774 PABPN1Q86U42 306 aaKnown RBP eCLIP20.26■□□□□ 0.83
CRIM1-204ENST00000428774 CECR2Q9BXF3 1484 aa19.78■□□□□ 0.76
CRIM1-204ENST00000428774 EIF4G1Q04637 1599 aaKnown RBP19.74■□□□□ 0.75
CRIM1-204ENST00000428774 BAZ1AQ9NRL2 1556 aaPredicted RBP19.7■□□□□ 0.74
CRIM1-204ENST00000428774 SMARCA4P51532 1647 aa19.69■□□□□ 0.74
CRIM1-204ENST00000428774 MROH2BQ7Z745 1585 aa19.66■□□□□ 0.74
CRIM1-204ENST00000428774 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
CRIM1-204ENST00000428774 CC2D2AQ9P2K1 1620 aa19.62■□□□□ 0.73
CRIM1-204ENST00000428774 RSF1Q96T23 1441 aaPredicted RBP19.59■□□□□ 0.73
CRIM1-204ENST00000428774 WIZO95785 1651 aa19.53■□□□□ 0.72
CRIM1-204ENST00000428774 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
CRIM1-204ENST00000428774 SUPT5HO00267 1087 aaKnown RBP19.46■□□□□ 0.71
CRIM1-204ENST00000428774 SMARCA2P51531 1590 aa19.36■□□□□ 0.69
CRIM1-204ENST00000428774 ATAD2BQ9ULI0 1458 aa19.36■□□□□ 0.69
CRIM1-204ENST00000428774 TOP2AP11388 1531 aaKnown RBP19.32■□□□□ 0.68
CRIM1-204ENST00000428774 HMGXB3Q12766 1538 aa19.26■□□□□ 0.67
CRIM1-204ENST00000428774 NCAPD3P42695 1498 aa19.26■□□□□ 0.67
CRIM1-204ENST00000428774 BAZ1BQ9UIG0 1483 aaKnown RBP19.23■□□□□ 0.67
CRIM1-204ENST00000428774 CCDC88BA6NC98 1476 aa19.03■□□□□ 0.64
CRIM1-204ENST00000428774 NESP48681 1621 aa18.86■□□□□ 0.61
CRIM1-204ENST00000428774 PRDM2Q13029 1718 aa18.83■□□□□ 0.6
CRIM1-204ENST00000428774 LAMC3Q9Y6N6 1575 aa18.76■□□□□ 0.59
CRIM1-204ENST00000428774 CFTRP13569 1480 aa18.71■□□□□ 0.59
CRIM1-204ENST00000428774 CADPSQ9ULU8 1353 aa18.71■□□□□ 0.59
CRIM1-204ENST00000428774 KIF21AQ7Z4S6 1674 aa18.7■□□□□ 0.58
CRIM1-204ENST00000428774 ABCC8Q09428 1581 aa18.61■□□□□ 0.57
CRIM1-204ENST00000428774 ERCC6Q03468 1493 aa18.58■□□□□ 0.56
CRIM1-204ENST00000428774 FANCD2Q9BXW9 1451 aa18.55■□□□□ 0.56
CRIM1-204ENST00000428774 PDS5BQ9NTI5 1447 aa18.54■□□□□ 0.56
CRIM1-204ENST00000428774 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
CRIM1-204ENST00000428774 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.56
CRIM1-204ENST00000428774 CEP164Q9UPV0 1460 aa18.5■□□□□ 0.55
CRIM1-204ENST00000428774 SYNJ1O43426 1573 aa18.49■□□□□ 0.55
CRIM1-204ENST00000428774 BIVM-ERCC5R4GMW8 1640 aa18.47■□□□□ 0.55
CRIM1-204ENST00000428774 WRNQ14191 1432 aaPredicted RBP eCLIP18.45■□□□□ 0.54
CRIM1-204ENST00000428774 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
CRIM1-204ENST00000428774 MRC2Q9UBG0 1479 aa18.42■□□□□ 0.54
CRIM1-204ENST00000428774 CUX1P39880 1505 aa18.42■□□□□ 0.54
CRIM1-204ENST00000428774 URB2Q14146 1524 aaKnown RBP18.4■□□□□ 0.54
CRIM1-204ENST00000428774 WDR62O43379 1518 aa18.38■□□□□ 0.53
CRIM1-204ENST00000428774 DNMBPQ6XZF7 1577 aa18.36■□□□□ 0.53
CRIM1-204ENST00000428774 TRIM41Q8WV44 630 aa18.31■□□□□ 0.52
CRIM1-204ENST00000428774 TOPBP1Q92547 1522 aa18.31■□□□□ 0.52
CRIM1-204ENST00000428774 CUX2O14529 1486 aa18.26■□□□□ 0.51
CRIM1-204ENST00000428774 FGD5Q6ZNL6 1462 aa18.24■□□□□ 0.51
CRIM1-204ENST00000428774 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
CRIM1-204ENST00000428774 POLA1P09884 1462 aaPredicted RBP18.18■□□□□ 0.5
CRIM1-204ENST00000428774 TARBP1Q13395 1621 aaKnown RBP18.13■□□□□ 0.49
CRIM1-204ENST00000428774 RAD54L2Q9Y4B4 1467 aa18.13■□□□□ 0.49
CRIM1-204ENST00000428774 SOGA1O94964 1423 aa18.12■□□□□ 0.49
CRIM1-204ENST00000428774 RUSC2Q8N2Y8 1516 aa18.09■□□□□ 0.49
CRIM1-204ENST00000428774 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
CRIM1-204ENST00000428774 ZNF608Q9ULD9 1512 aaPredicted RBP18.07■□□□□ 0.48
CRIM1-204ENST00000428774 IFT140Q96RY7 1462 aa18.07■□□□□ 0.48
CRIM1-204ENST00000428774 ABCA5Q8WWZ7 1642 aa18.04■□□□□ 0.48
CRIM1-204ENST00000428774 EEA1Q15075 1411 aa18.04■□□□□ 0.48
CRIM1-204ENST00000428774 EIF4G3O43432 1585 aaKnown RBP18.02■□□□□ 0.48
CRIM1-204ENST00000428774 KIF27Q86VH2 1401 aa17.98■□□□□ 0.47
CRIM1-204ENST00000428774 PBRM1Q86U86 1689 aa17.97■□□□□ 0.47
CRIM1-204ENST00000428774 FAM9AQ8IZU1 332 aaPredicted RBP17.97■□□□□ 0.47
CRIM1-204ENST00000428774 AQRO60306 1485 aaKnown RBP eCLIP17.96■□□□□ 0.471e-9■■■■■ 30.5
CRIM1-204ENST00000428774 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
CRIM1-204ENST00000428774 KIF21BO75037 1637 aa17.94■□□□□ 0.46
CRIM1-204ENST00000428774 CUL7Q14999 1698 aa17.88■□□□□ 0.45
CRIM1-204ENST00000428774 GAPVD1Q14C86 1478 aa17.88■□□□□ 0.45
CRIM1-204ENST00000428774 ERICH3Q5RHP9 1530 aa17.87■□□□□ 0.45
CRIM1-204ENST00000428774 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
CRIM1-204ENST00000428774 PRXQ9BXM0 1461 aa17.83■□□□□ 0.45
CRIM1-204ENST00000428774 ADAMTS12P58397 1594 aa17.83■□□□□ 0.44
CRIM1-204ENST00000428774 SNAPC4Q5SXM2 1469 aa17.82■□□□□ 0.44
CRIM1-204ENST00000428774 GOLGA3Q08378 1498 aa17.81■□□□□ 0.44
CRIM1-204ENST00000428774 GRIN2BQ13224 1484 aa17.81■□□□□ 0.44
CRIM1-204ENST00000428774 IGF1RP08069 1367 aa17.8■□□□□ 0.44
CRIM1-204ENST00000428774 CHD1O14646 1710 aa17.8■□□□□ 0.44
CRIM1-204ENST00000428774 RAPGEF2Q9Y4G8 1499 aa17.79■□□□□ 0.44
CRIM1-204ENST00000428774 LOC105371045A0A1W2PR82 267 aa17.75■□□□□ 0.43
CRIM1-204ENST00000428774 CARMIL1Q5VZK9 1371 aa17.73■□□□□ 0.43
CRIM1-204ENST00000428774 MAGI1Q96QZ7 1491 aaPredicted RBP17.72■□□□□ 0.43
CRIM1-204ENST00000428774 EHMT2Q96KQ7 1210 aa17.72■□□□□ 0.43
CRIM1-204ENST00000428774 CTTNBP2Q8WZ74 1663 aa17.71■□□□□ 0.42
CRIM1-204ENST00000428774 FHAD1B1AJZ9 1412 aa17.68■□□□□ 0.42
CRIM1-204ENST00000428774 SYNJ2O15056 1496 aa17.66■□□□□ 0.42
CRIM1-204ENST00000428774 TNIKQ9UKE5 1360 aa17.64■□□□□ 0.41
CRIM1-204ENST00000428774 FBLN2P98095 1184 aa17.63■□□□□ 0.41
CRIM1-204ENST00000428774 GRIN2AQ12879 1464 aa17.61■□□□□ 0.41
CRIM1-204ENST00000428774 CEP170Q5SW79 1584 aa17.58■□□□□ 0.41
CRIM1-204ENST00000428774 CHMP7Q8WUX9 453 aaPredicted RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms