RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 A2MP01023 1474 aa21.91■■□□□ 1.1
GINS3-203ENST00000426538 TIMELESSQ9UNS1 1208 aa21.91■■□□□ 1.1
GINS3-203ENST00000426538 FAM135AQ9P2D6 1515 aa21.89■■□□□ 1.09
GINS3-203ENST00000426538 FRMPD1Q5SYB0 1578 aa21.88■■□□□ 1.09
GINS3-203ENST00000426538 EIF2AK4Q9P2K8 1649 aaKnown RBP21.88■■□□□ 1.09
GINS3-203ENST00000426538 ANKRD30BQ9BXX2 1392 aa21.87■■□□□ 1.09
GINS3-203ENST00000426538 KANK1Q14678 1352 aa21.86■■□□□ 1.09
GINS3-203ENST00000426538 MAGI2Q86UL8 1455 aa21.86■■□□□ 1.09
GINS3-203ENST00000426538 ABCA6Q8N139 1617 aa21.86■■□□□ 1.09
GINS3-203ENST00000426538 ZMYM4Q5VZL5 1548 aa21.86■■□□□ 1.09
GINS3-203ENST00000426538 IQGAP3Q86VI3 1631 aa21.84■■□□□ 1.09
GINS3-203ENST00000426538 TONSLQ96HA7 1378 aa21.84■■□□□ 1.09
GINS3-203ENST00000426538 YEATS2Q9ULM3 1422 aa21.83■■□□□ 1.09
GINS3-203ENST00000426538 DIP2CQ9Y2E4 1556 aa21.83■■□□□ 1.08
GINS3-203ENST00000426538 COL17A1Q9UMD9 1497 aaPredicted RBP21.81■■□□□ 1.08
GINS3-203ENST00000426538 DEPDC5O75140 1603 aa21.81■■□□□ 1.08
GINS3-203ENST00000426538 GGT6Q6P531 493 aa21.79■■□□□ 1.08
GINS3-203ENST00000426538 ATP10AO60312 1499 aa21.77■■□□□ 1.08
GINS3-203ENST00000426538 PRDM15P57071 1507 aaPredicted RBP21.76■■□□□ 1.07
GINS3-203ENST00000426538 RPRD2Q5VT52 1461 aaKnown RBP21.75■■□□□ 1.07
GINS3-203ENST00000426538 RNF17Q9BXT8 1623 aaKnown RBP21.74■■□□□ 1.07
GINS3-203ENST00000426538 BCORL1Q5H9F3 1711 aa21.74■■□□□ 1.07
GINS3-203ENST00000426538 VWDEQ8N2E2 1590 aa21.73■■□□□ 1.07
GINS3-203ENST00000426538 PPP1R15AO75807 674 aaPredicted RBP21.73■■□□□ 1.07
GINS3-203ENST00000426538 MROH1Q8NDA8 1641 aa21.72■■□□□ 1.07
GINS3-203ENST00000426538 WASHC2CQ9Y4E1 1318 aa21.71■■□□□ 1.07
GINS3-203ENST00000426538 TET3O43151 1660 aa21.69■■□□□ 1.06
GINS3-203ENST00000426538 REREQ9P2R6 1566 aa21.68■■□□□ 1.06
GINS3-203ENST00000426538 CCDC144AA2RUR9 1427 aa21.68■■□□□ 1.06
GINS3-203ENST00000426538 L3MBTL2Q969R5 705 aa21.67■■□□□ 1.06
GINS3-203ENST00000426538 ARHGEF40Q8TER5 1519 aa21.67■■□□□ 1.06
GINS3-203ENST00000426538 E9PCH4 1651 aa21.66■■□□□ 1.06
GINS3-203ENST00000426538 LMTK2Q8IWU2 1503 aa21.66■■□□□ 1.06
GINS3-203ENST00000426538 AGLP35573 1532 aa21.64■■□□□ 1.05
GINS3-203ENST00000426538 PLA2R1Q13018 1463 aa21.64■■□□□ 1.05
GINS3-203ENST00000426538 CEP152O94986 1710 aa21.63■■□□□ 1.05
GINS3-203ENST00000426538 PPP6R1Q9UPN7 881 aa21.62■■□□□ 1.05
GINS3-203ENST00000426538 EFCAB6Q5THR3 1501 aa21.62■■□□□ 1.05
GINS3-203ENST00000426538 ABCC3O15438 1527 aa21.6■■□□□ 1.05
GINS3-203ENST00000426538 PTPRTO14522 1441 aa21.59■■□□□ 1.05
GINS3-203ENST00000426538 ARID4BQ4LE39 1312 aaPredicted RBP21.59■■□□□ 1.05
GINS3-203ENST00000426538 SPHKAPQ2M3C7 1700 aa21.58■■□□□ 1.05
GINS3-203ENST00000426538 ZNF316A6NFI3 1004 aaPredicted RBP21.58■■□□□ 1.04
GINS3-203ENST00000426538 MLECQ14165 292 aa21.58■■□□□ 1.04
GINS3-203ENST00000426538 ZC3H13Q5T200 1668 aaKnown RBP21.57■■□□□ 1.04
GINS3-203ENST00000426538 TRPM2O94759 1503 aa21.57■■□□□ 1.04
GINS3-203ENST00000426538 NPATQ14207 1427 aa21.55■■□□□ 1.04
GINS3-203ENST00000426538 RGL3Q3MIN7 710 aa21.55■■□□□ 1.04
GINS3-203ENST00000426538 ESF1Q9H501 851 aaKnown RBP21.55■■□□□ 1.04
GINS3-203ENST00000426538 CAMSAP1Q5T5Y3 1602 aa21.54■■□□□ 1.04
GINS3-203ENST00000426538 DCAF11Q8TEB1 546 aa21.52■■□□□ 1.04
GINS3-203ENST00000426538 ARHGAP31Q2M1Z3 1444 aa21.52■■□□□ 1.04
GINS3-203ENST00000426538 SIGLEC1Q9BZZ2 1709 aa21.52■■□□□ 1.04
GINS3-203ENST00000426538 KDM2AQ9Y2K7 1162 aa21.5■■□□□ 1.03
GINS3-203ENST00000426538 CFAP65Q6ZU64 1925 aaKnown RBP21.5■■□□□ 1.03
GINS3-203ENST00000426538 ZNF326Q5BKZ1 582 aaKnown RBP21.49■■□□□ 1.03
GINS3-203ENST00000426538 CNTLNQ9NXG0 1405 aa21.49■■□□□ 1.03
GINS3-203ENST00000426538 CLTCL1P53675 1640 aa21.47■■□□□ 1.03
GINS3-203ENST00000426538 NBPF8Q3BBV2 869 aa21.47■■□□□ 1.03
GINS3-203ENST00000426538 NOS1P29475 1434 aa21.45■■□□□ 1.02
GINS3-203ENST00000426538 SPATA31E1Q6ZUB1 1445 aa21.45■■□□□ 1.02
GINS3-203ENST00000426538 CLTCQ00610 1675 aaKnown RBP21.44■■□□□ 1.02
GINS3-203ENST00000426538 UGGT1Q9NYU2 1555 aa21.42■■□□□ 1.02
GINS3-203ENST00000426538 UHRF1BP1Q6BDS2 1440 aa21.42■■□□□ 1.02
GINS3-203ENST00000426538 CHGAP10645 457 aaKnown RBP21.42■■□□□ 1.02
GINS3-203ENST00000426538 STAC3Q96MF2 364 aa21.42■■□□□ 1.02
GINS3-203ENST00000426538 KIF1BO60333 1816 aa21.41■■□□□ 1.02
GINS3-203ENST00000426538 SLC52A1Q9NWF4 448 aa21.41■■□□□ 1.02
GINS3-203ENST00000426538 NEURL4Q96JN8 1562 aa21.39■■□□□ 1.01
GINS3-203ENST00000426538 ZMYM3Q14202 1370 aa21.39■■□□□ 1.01
GINS3-203ENST00000426538 FBXO31Q5XUX0 539 aaPredicted RBP21.39■■□□□ 1.01
GINS3-203ENST00000426538 PREX1Q8TCU6 1659 aa21.38■■□□□ 1.01
GINS3-203ENST00000426538 SYNMO15061 1565 aa21.36■■□□□ 1.01
GINS3-203ENST00000426538 EIF4G2P78344 907 aaKnown RBP eCLIP21.36■■□□□ 1.01
GINS3-203ENST00000426538 IDI1Q13907 227 aa21.36■■□□□ 1.01
GINS3-203ENST00000426538 ERVK-7P63135 1459 aa21.35■■□□□ 1.01
GINS3-203ENST00000426538 PRAG1Q86YV5 1406 aa21.35■■□□□ 1.01
GINS3-203ENST00000426538 HIRIP3Q9BW71 556 aaPredicted RBP21.33■■□□□ 1.01
GINS3-203ENST00000426538 PIK3C2BO00750 1634 aa21.33■■□□□ 1.01
GINS3-203ENST00000426538 RALGAPBQ86X10 1494 aa21.31■■□□□ 1
GINS3-203ENST00000426538 ADGRB3O60242 1522 aa21.31■■□□□ 1
GINS3-203ENST00000426538 CARD11Q9BXL7 1154 aa21.31■■□□□ 1
GINS3-203ENST00000426538 RPGRIP1LQ68CZ1 1315 aa21.31■■□□□ 1
GINS3-203ENST00000426538 HSPA5P11021 654 aaKnown RBP21.3■■□□□ 1
GINS3-203ENST00000426538 STAG3Q9UJ98 1225 aa21.3■■□□□ 1
GINS3-203ENST00000426538 SPATA31D1Q6ZQQ2 1576 aa21.3■■□□□ 1
GINS3-203ENST00000426538 ROCK2O75116 1388 aaKnown RBP21.29■■□□□ 1
GINS3-203ENST00000426538 DIEXFQ68CQ4 756 aaKnown RBP21.29■■□□□ 1
GINS3-203ENST00000426538 MROH2AA6NES4 1674 aa21.28■■□□□ 1
GINS3-203ENST00000426538 TRPM1Q7Z4N2 1603 aa21.25■□□□□ 0.99
GINS3-203ENST00000426538 FER1L4A9Z1Z3 1794 aa21.25■□□□□ 0.99
GINS3-203ENST00000426538 MYOM2P54296 1465 aa21.24■□□□□ 0.99
GINS3-203ENST00000426538 VGFO15240 615 aaPredicted RBP21.24■□□□□ 0.99
GINS3-203ENST00000426538 NBPF1Q3BBV0 1214 aa21.24■□□□□ 0.99
GINS3-203ENST00000426538 TNRQ92752 1358 aa21.23■□□□□ 0.99
GINS3-203ENST00000426538 USP47Q96K76 1375 aa21.23■□□□□ 0.99
GINS3-203ENST00000426538 CEBPAP49715 358 aaPredicted RBP21.23■□□□□ 0.99
GINS3-203ENST00000426538 MADDQ8WXG6 1647 aa21.23■□□□□ 0.99
GINS3-203ENST00000426538 ADGRF5Q8IZF2 1346 aa21.22■□□□□ 0.99
GINS3-203ENST00000426538 IFT172Q9UG01 1749 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms