RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 EIF2AK4Q9P2K8 1649 aaKnown RBP21.87■■□□□ 1.09
ACTB-204ENST00000425660 TEX14Q8IWB6 1497 aa21.86■■□□□ 1.09
ACTB-204ENST00000425660 HECW2Q9P2P5 1572 aa21.85■■□□□ 1.09
ACTB-204ENST00000425660 L3MBTL2Q969R5 705 aa21.8■■□□□ 1.08
ACTB-204ENST00000425660 RICTORQ6R327 1708 aa21.8■■□□□ 1.08
ACTB-204ENST00000425660 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.8■■□□□ 1.082e-37■□□□□ 8.4
ACTB-204ENST00000425660 VWDEQ8N2E2 1590 aa21.8■■□□□ 1.08
ACTB-204ENST00000425660 A2MP01023 1474 aa21.79■■□□□ 1.08
ACTB-204ENST00000425660 PPRC1Q5VV67 1664 aaKnown RBP21.79■■□□□ 1.08
ACTB-204ENST00000425660 ATP10AO60312 1499 aa21.79■■□□□ 1.08
ACTB-204ENST00000425660 PRDM15P57071 1507 aaPredicted RBP21.79■■□□□ 1.08
ACTB-204ENST00000425660 KIF13AQ9H1H9 1805 aa21.78■■□□□ 1.08
ACTB-204ENST00000425660 MYT1LQ9UL68 1186 aa21.78■■□□□ 1.08
ACTB-204ENST00000425660 RAPGEF3O95398 923 aa21.77■■□□□ 1.08
ACTB-204ENST00000425660 DIEXFQ68CQ4 756 aaKnown RBP21.77■■□□□ 1.08
ACTB-204ENST00000425660 FRMPD1Q5SYB0 1578 aa21.76■■□□□ 1.07
ACTB-204ENST00000425660 MROH1Q8NDA8 1641 aa21.76■■□□□ 1.07
ACTB-204ENST00000425660 PLA2R1Q13018 1463 aa21.76■■□□□ 1.07
ACTB-204ENST00000425660 TSPOAP1O95153 1857 aa21.75■■□□□ 1.07
ACTB-204ENST00000425660 ABCA6Q8N139 1617 aa21.75■■□□□ 1.07
ACTB-204ENST00000425660 KIF3BO15066 747 aa21.74■■□□□ 1.07
ACTB-204ENST00000425660 BCORL1Q5H9F3 1711 aa21.74■■□□□ 1.07
ACTB-204ENST00000425660 RNF17Q9BXT8 1623 aaKnown RBP21.73■■□□□ 1.07
ACTB-204ENST00000425660 ZMYM4Q5VZL5 1548 aa21.73■■□□□ 1.07
ACTB-204ENST00000425660 KANK1Q14678 1352 aa21.72■■□□□ 1.07
ACTB-204ENST00000425660 DIP2CQ9Y2E4 1556 aa21.71■■□□□ 1.07
ACTB-204ENST00000425660 TET3O43151 1660 aa21.71■■□□□ 1.07
ACTB-204ENST00000425660 CCDC144AA2RUR9 1427 aa21.7■■□□□ 1.06
ACTB-204ENST00000425660 LMTK2Q8IWU2 1503 aa21.69■■□□□ 1.06
ACTB-204ENST00000425660 E9PCH4 1651 aa21.68■■□□□ 1.06
ACTB-204ENST00000425660 PTPRTO14522 1441 aa21.67■■□□□ 1.06
ACTB-204ENST00000425660 YEATS2Q9ULM3 1422 aa21.65■■□□□ 1.06
ACTB-204ENST00000425660 TRPM2O94759 1503 aa21.64■■□□□ 1.05
ACTB-204ENST00000425660 UHRF1BP1Q6BDS2 1440 aa21.64■■□□□ 1.05
ACTB-204ENST00000425660 NBPF8Q3BBV2 869 aa21.64■■□□□ 1.05
ACTB-204ENST00000425660 EFCAB6Q5THR3 1501 aa21.63■■□□□ 1.05
ACTB-204ENST00000425660 SPHKAPQ2M3C7 1700 aa21.59■■□□□ 1.05
ACTB-204ENST00000425660 REREQ9P2R6 1566 aa21.59■■□□□ 1.05
ACTB-204ENST00000425660 COL17A1Q9UMD9 1497 aaPredicted RBP21.57■■□□□ 1.04
ACTB-204ENST00000425660 SPATA31E1Q6ZUB1 1445 aa21.56■■□□□ 1.04
ACTB-204ENST00000425660 ABCC3O15438 1527 aa21.55■■□□□ 1.04
ACTB-204ENST00000425660 GGT6Q6P531 493 aa21.54■■□□□ 1.04
ACTB-204ENST00000425660 CEP152O94986 1710 aa21.54■■□□□ 1.04
ACTB-204ENST00000425660 NEURL4Q96JN8 1562 aa21.54■■□□□ 1.04
ACTB-204ENST00000425660 RALGAPBQ86X10 1494 aa21.53■■□□□ 1.04
ACTB-204ENST00000425660 EIF4G2P78344 907 aaKnown RBP eCLIP21.52■■□□□ 1.04
ACTB-204ENST00000425660 AGLP35573 1532 aa21.52■■□□□ 1.04
ACTB-204ENST00000425660 DCAF11Q8TEB1 546 aa21.52■■□□□ 1.04
ACTB-204ENST00000425660 NPATQ14207 1427 aa21.52■■□□□ 1.03
ACTB-204ENST00000425660 CLTCL1P53675 1640 aa21.52■■□□□ 1.03
ACTB-204ENST00000425660 ZC3H13Q5T200 1668 aaKnown RBP21.51■■□□□ 1.03
ACTB-204ENST00000425660 WASHC2CQ9Y4E1 1318 aa21.5■■□□□ 1.03
ACTB-204ENST00000425660 HSPA5P11021 654 aaKnown RBP21.5■■□□□ 1.03
ACTB-204ENST00000425660 PRAG1Q86YV5 1406 aa21.49■■□□□ 1.03
ACTB-204ENST00000425660 HIRIP3Q9BW71 556 aaPredicted RBP21.49■■□□□ 1.03
ACTB-204ENST00000425660 ARHGAP31Q2M1Z3 1444 aa21.48■■□□□ 1.03
ACTB-204ENST00000425660 ARHGEF40Q8TER5 1519 aa21.48■■□□□ 1.03
ACTB-204ENST00000425660 CAMSAP1Q5T5Y3 1602 aa21.47■■□□□ 1.03
ACTB-204ENST00000425660 RGL3Q3MIN7 710 aa21.46■■□□□ 1.03
ACTB-204ENST00000425660 CNTLNQ9NXG0 1405 aa21.46■■□□□ 1.03
ACTB-204ENST00000425660 STAC3Q96MF2 364 aa21.45■■□□□ 1.03
ACTB-204ENST00000425660 KDM2AQ9Y2K7 1162 aa21.45■■□□□ 1.02
ACTB-204ENST00000425660 ZNF326Q5BKZ1 582 aaKnown RBP21.44■■□□□ 1.02
ACTB-204ENST00000425660 NOS1P29475 1434 aa21.43■■□□□ 1.02
ACTB-204ENST00000425660 PPP6R1Q9UPN7 881 aa21.43■■□□□ 1.02
ACTB-204ENST00000425660 TRPM1Q7Z4N2 1603 aa21.42■■□□□ 1.02
ACTB-204ENST00000425660 MIER1Q8N108 512 aa21.41■■□□□ 1.02
ACTB-204ENST00000425660 UGGT1Q9NYU2 1555 aa21.41■■□□□ 1.02
ACTB-204ENST00000425660 GPRASP1Q5JY77 1395 aa21.4■■□□□ 1.02
ACTB-204ENST00000425660 USP47Q96K76 1375 aa21.4■■□□□ 1.02
ACTB-204ENST00000425660 SIGLEC1Q9BZZ2 1709 aa21.39■■□□□ 1.01
ACTB-204ENST00000425660 ADGRB3O60242 1522 aa21.37■■□□□ 1.01
ACTB-204ENST00000425660 ROCK2O75116 1388 aaKnown RBP21.37■■□□□ 1.01
ACTB-204ENST00000425660 WASHC2AQ641Q2 1341 aa21.36■■□□□ 1.01
ACTB-204ENST00000425660 DDX10Q13206 875 aaKnown RBP21.36■■□□□ 1.01
ACTB-204ENST00000425660 CARD11Q9BXL7 1154 aa21.36■■□□□ 1.01
ACTB-204ENST00000425660 LAMC1P11047 1609 aa21.36■■□□□ 1.01
ACTB-204ENST00000425660 KIF1BO60333 1816 aa21.36■■□□□ 1.01
ACTB-204ENST00000425660 PIK3C2BO00750 1634 aa21.36■■□□□ 1.01
ACTB-204ENST00000425660 MADDQ8WXG6 1647 aa21.36■■□□□ 1.01
ACTB-204ENST00000425660 SYNMO15061 1565 aa21.34■■□□□ 1.01
ACTB-204ENST00000425660 MYOM2P54296 1465 aa21.34■■□□□ 1.01
ACTB-204ENST00000425660 MROH2AA6NES4 1674 aa21.31■■□□□ 1
ACTB-204ENST00000425660 CCDC7Q96M83 1385 aa21.31■■□□□ 1
ACTB-204ENST00000425660 C11orf95C9JLR9 678 aaPredicted RBP21.3■■□□□ 1
ACTB-204ENST00000425660 POLR1AO95602 1720 aaPredicted RBP21.3■■□□□ 1
ACTB-204ENST00000425660 IFT172Q9UG01 1749 aa21.3■■□□□ 1
ACTB-204ENST00000425660 NBPF1Q3BBV0 1214 aa21.29■■□□□ 1
ACTB-204ENST00000425660 PREX1Q8TCU6 1659 aa21.29■■□□□ 1
ACTB-204ENST00000425660 NRXN1Q9ULB1 1477 aa21.29■■□□□ 1
ACTB-204ENST00000425660 SLC52A1Q9NWF4 448 aa21.28■■□□□ 1
ACTB-204ENST00000425660 ARID4BQ4LE39 1312 aaPredicted RBP21.27■■□□□ 1
ACTB-204ENST00000425660 CFAP65Q6ZU64 1925 aaKnown RBP21.26■□□□□ 0.99
ACTB-204ENST00000425660 ERVK-7P63135 1459 aa21.26■□□□□ 0.99
ACTB-204ENST00000425660 KIF7Q2M1P5 1343 aa21.26■□□□□ 0.99
ACTB-204ENST00000425660 KIAA1210Q9ULL0 1709 aa21.25■□□□□ 0.99
ACTB-204ENST00000425660 RPGRIP1LQ68CZ1 1315 aa21.25■□□□□ 0.99
ACTB-204ENST00000425660 CLTCQ00610 1675 aaKnown RBP21.25■□□□□ 0.99
ACTB-204ENST00000425660 ST20-MTHFSA0A0A6YYL1 179 aa21.23■□□□□ 0.99
ACTB-204ENST00000425660 IDI1Q13907 227 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms