RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 RTL5Q5HYW3 569 aaPredicted RBP10.02□□□□□ -0.8
SMARCC1-202ENST00000425518 PLIN1O60240 522 aa10.02□□□□□ -0.81
SMARCC1-202ENST00000425518 KIF14Q15058 1648 aa10.02□□□□□ -0.81
SMARCC1-202ENST00000425518 ADGRL2O95490 1459 aa10.01□□□□□ -0.81
SMARCC1-202ENST00000425518 RALGAPBQ86X10 1494 aa10.01□□□□□ -0.81
SMARCC1-202ENST00000425518 UHRF1BP1Q6BDS2 1440 aa10.01□□□□□ -0.81
SMARCC1-202ENST00000425518 KTN1Q86UP2 1357 aaKnown RBP10.01□□□□□ -0.81
SMARCC1-202ENST00000425518 LRPPRCP42704 1394 aaKnown RBP10.01□□□□□ -0.81
SMARCC1-202ENST00000425518 KDM5CP41229 1560 aa10.01□□□□□ -0.81
SMARCC1-202ENST00000425518 PANK3Q9H999 370 aa9.99□□□□□ -0.81
SMARCC1-202ENST00000425518 PDE4AP27815 886 aa9.99□□□□□ -0.81
SMARCC1-202ENST00000425518 TCERG1O14776 1098 aaKnown RBP9.98□□□□□ -0.81
SMARCC1-202ENST00000425518 SKAP1Q86WV1 359 aa9.98□□□□□ -0.81
SMARCC1-202ENST00000425518 PER1O15534 1290 aaPredicted RBP9.98□□□□□ -0.81
SMARCC1-202ENST00000425518 PDE3BQ13370 1112 aa9.98□□□□□ -0.81
SMARCC1-202ENST00000425518 LAS1LQ9Y4W2 734 aaKnown RBP9.98□□□□□ -0.81
SMARCC1-202ENST00000425518 ATP10BO94823 1461 aa9.97□□□□□ -0.81
SMARCC1-202ENST00000425518 MAGI1Q96QZ7 1491 aaPredicted RBP9.97□□□□□ -0.81
SMARCC1-202ENST00000425518 CCDC144AA2RUR9 1427 aa9.97□□□□□ -0.81
SMARCC1-202ENST00000425518 POLR1AO95602 1720 aaPredicted RBP9.96□□□□□ -0.81
SMARCC1-202ENST00000425518 ITSN2Q9NZM3 1697 aa9.96□□□□□ -0.82
SMARCC1-202ENST00000425518 CRBNQ96SW2 442 aa9.96□□□□□ -0.82
SMARCC1-202ENST00000425518 SYNJ2O15056 1496 aa9.95□□□□□ -0.82
SMARCC1-202ENST00000425518 PARD3Q8TEW0 1356 aa9.95□□□□□ -0.82
SMARCC1-202ENST00000425518 ADGBQ8N7X0 1667 aa9.95□□□□□ -0.82
SMARCC1-202ENST00000425518 EIF4G3O43432 1585 aaKnown RBP9.94□□□□□ -0.82
SMARCC1-202ENST00000425518 CEP170Q5SW79 1584 aa9.94□□□□□ -0.82
SMARCC1-202ENST00000425518 TMF1P82094 1093 aa9.94□□□□□ -0.82
SMARCC1-202ENST00000425518 ARHGEF12Q9NZN5 1544 aa9.94□□□□□ -0.82
SMARCC1-202ENST00000425518 BACH2Q9BYV9 841 aa9.94□□□□□ -0.82
SMARCC1-202ENST00000425518 ABCC10Q5T3U5 1492 aa9.93□□□□□ -0.82
SMARCC1-202ENST00000425518 DISP3Q9P2K9 1392 aa9.93□□□□□ -0.82
SMARCC1-202ENST00000425518 TESK2Q96S53 571 aa9.93□□□□□ -0.82
SMARCC1-202ENST00000425518 ADAMTS8Q9UP79 889 aa9.93□□□□□ -0.82
SMARCC1-202ENST00000425518 PTPRGP23470 1445 aa9.93□□□□□ -0.82
SMARCC1-202ENST00000425518 PRAG1Q86YV5 1406 aa9.93□□□□□ -0.82
SMARCC1-202ENST00000425518 RSPH4AQ5TD94 716 aa9.93□□□□□ -0.82
SMARCC1-202ENST00000425518 C20orf194Q5TEA3 1177 aa9.92□□□□□ -0.82
SMARCC1-202ENST00000425518 NEFMP07197 916 aa9.92□□□□□ -0.82
SMARCC1-202ENST00000425518 SHANK2Q9UPX8 1470 aa9.92□□□□□ -0.82
SMARCC1-202ENST00000425518 KNSTRNQ9Y448 316 aa9.91□□□□□ -0.82
SMARCC1-202ENST00000425518 MS4A1P11836 297 aa9.91□□□□□ -0.82
SMARCC1-202ENST00000425518 WDR43Q15061 677 aaKnown RBP eCLIP9.91□□□□□ -0.822e-6■□□□□ 11.2
SMARCC1-202ENST00000425518 FAM135AQ9P2D6 1515 aa9.9□□□□□ -0.82
SMARCC1-202ENST00000425518 NUP160Q12769 1436 aa9.9□□□□□ -0.83
SMARCC1-202ENST00000425518 WASHC2CQ9Y4E1 1318 aa9.9□□□□□ -0.83
SMARCC1-202ENST00000425518 CCDC141Q6ZP82 1450 aa9.89□□□□□ -0.83
SMARCC1-202ENST00000425518 CROCC2H7BZ55 1655 aa9.89□□□□□ -0.83
SMARCC1-202ENST00000425518 ERBINQ96RT1 1412 aa9.89□□□□□ -0.83
SMARCC1-202ENST00000425518 ADCY10Q96PN6 1610 aa9.89□□□□□ -0.83
SMARCC1-202ENST00000425518 SLC4A3P48751 1232 aa9.88□□□□□ -0.83
SMARCC1-202ENST00000425518 PLA2R1Q13018 1463 aa9.88□□□□□ -0.83
SMARCC1-202ENST00000425518 CDC42BPAQ5VT25 1732 aa9.88□□□□□ -0.83
SMARCC1-202ENST00000425518 A2MP01023 1474 aa9.87□□□□□ -0.83
SMARCC1-202ENST00000425518 PPP2R1AP30153 589 aa9.87□□□□□ -0.83
SMARCC1-202ENST00000425518 PLEKHH2Q8IVE3 1493 aa9.87□□□□□ -0.83
SMARCC1-202ENST00000425518 KDM5DQ9BY66 1539 aa9.87□□□□□ -0.83
SMARCC1-202ENST00000425518 CCDC146Q8IYE0 955 aa9.87□□□□□ -0.83
SMARCC1-202ENST00000425518 DAXXQ9UER7 740 aaPredicted RBP9.87□□□□□ -0.83
SMARCC1-202ENST00000425518 ABCA8O94911 1581 aa9.87□□□□□ -0.83
SMARCC1-202ENST00000425518 GPRASP1Q5JY77 1395 aa9.86□□□□□ -0.83
SMARCC1-202ENST00000425518 GOLGA2Q08379 1002 aa9.86□□□□□ -0.83
SMARCC1-202ENST00000425518 RGS3P49796 1198 aa9.85□□□□□ -0.83
SMARCC1-202ENST00000425518 COL17A1Q9UMD9 1497 aaPredicted RBP9.85□□□□□ -0.83
SMARCC1-202ENST00000425518 PPM1GO15355 546 aaPredicted RBP9.85□□□□□ -0.83
SMARCC1-202ENST00000425518 DUSP27Q5VZP5 1158 aa9.84□□□□□ -0.83
SMARCC1-202ENST00000425518 DDRGK1Q96HY6 314 aa9.84□□□□□ -0.83
SMARCC1-202ENST00000425518 RTN4Q9NQC3 1192 aaKnown RBP9.84□□□□□ -0.83
SMARCC1-202ENST00000425518 ARHGAP5Q13017 1502 aa9.84□□□□□ -0.83
SMARCC1-202ENST00000425518 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.84□□□□□ -0.83
SMARCC1-202ENST00000425518 PLEKHH1Q9ULM0 1364 aa9.84□□□□□ -0.83
SMARCC1-202ENST00000425518 BLMP54132 1417 aaPredicted RBP9.83□□□□□ -0.84
SMARCC1-202ENST00000425518 SYCP2Q9BX26 1530 aa9.83□□□□□ -0.84
SMARCC1-202ENST00000425518 ARHGEF5Q12774 1597 aa9.83□□□□□ -0.84
SMARCC1-202ENST00000425518 SAMD9LQ8IVG5 1584 aa9.83□□□□□ -0.84
SMARCC1-202ENST00000425518 APAF1O14727 1248 aa9.83□□□□□ -0.84
SMARCC1-202ENST00000425518 AMER1Q5JTC6 1135 aaPredicted RBP9.83□□□□□ -0.84
SMARCC1-202ENST00000425518 CENPQQ7L2Z9 268 aaPredicted RBP9.82□□□□□ -0.84
SMARCC1-202ENST00000425518 IL27Q8NEV9 243 aa9.82□□□□□ -0.84
SMARCC1-202ENST00000425518 CDCA8Q53HL2 280 aa9.82□□□□□ -0.84
SMARCC1-202ENST00000425518 EFCAB2Q5VUJ9 269 aa9.82□□□□□ -0.84
SMARCC1-202ENST00000425518 USP35Q9P2H5 1018 aa9.82□□□□□ -0.84
SMARCC1-202ENST00000425518 TRPM1Q7Z4N2 1603 aa9.82□□□□□ -0.84
SMARCC1-202ENST00000425518 AFAP1Q8N556 730 aa9.81□□□□□ -0.84
SMARCC1-202ENST00000425518 E9PCH4 1651 aa9.8□□□□□ -0.84
SMARCC1-202ENST00000425518 BCAR3O75815 825 aa9.8□□□□□ -0.84
SMARCC1-202ENST00000425518 SPINK5Q9NQ38 1064 aaPredicted RBP9.8□□□□□ -0.84
SMARCC1-202ENST00000425518 MAGI2Q86UL8 1455 aa9.8□□□□□ -0.84
SMARCC1-202ENST00000425518 SLFN5Q08AF3 891 aa9.8□□□□□ -0.84
SMARCC1-202ENST00000425518 KDM2BQ8NHM5 1336 aa9.8□□□□□ -0.84
SMARCC1-202ENST00000425518 FAM161AQ3B820 660 aa9.8□□□□□ -0.84
SMARCC1-202ENST00000425518 PRDM15P57071 1507 aaPredicted RBP9.78□□□□□ -0.84
SMARCC1-202ENST00000425518 NFKBIBQ15653 356 aa9.78□□□□□ -0.84
SMARCC1-202ENST00000425518 NEUROD2Q15784 382 aa9.78□□□□□ -0.84
SMARCC1-202ENST00000425518 SPAG9O60271 1321 aaKnown RBP9.78□□□□□ -0.84
SMARCC1-202ENST00000425518 INSRP06213 1382 aa9.78□□□□□ -0.84
SMARCC1-202ENST00000425518 ZMYM4Q5VZL5 1548 aa9.78□□□□□ -0.84
SMARCC1-202ENST00000425518 CANXP27824 592 aaKnown RBP9.78□□□□□ -0.84
SMARCC1-202ENST00000425518 TNNT2P45379 298 aaPredicted RBP9.78□□□□□ -0.84
SMARCC1-202ENST00000425518 CFAP70Q5T0N1 1121 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms