RNA–Protein interactions for RNA: ENST00000425375.5

TOM1-206, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1, Length 2,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-206ENST00000425375 KIDINS220Q9ULH0 1771 aa22.83■■□□□ 1.25
TOM1-206ENST00000425375 PPP1R15AO75807 674 aaPredicted RBP22.83■■□□□ 1.25
TOM1-206ENST00000425375 RPRD2Q5VT52 1461 aaKnown RBP22.83■■□□□ 1.24
TOM1-206ENST00000425375 MAGI2Q86UL8 1455 aa22.83■■□□□ 1.24
TOM1-206ENST00000425375 MLH3Q9UHC1 1453 aa22.82■■□□□ 1.24
TOM1-206ENST00000425375 IQGAP3Q86VI3 1631 aa22.81■■□□□ 1.24
TOM1-206ENST00000425375 DHX29Q7Z478 1369 aaKnown RBP22.8■■□□□ 1.24
TOM1-206ENST00000425375 HECW2Q9P2P5 1572 aa22.8■■□□□ 1.24
TOM1-206ENST00000425375 RAPGEF3O95398 923 aa22.78■■□□□ 1.24
TOM1-206ENST00000425375 TEX14Q8IWB6 1497 aa22.77■■□□□ 1.24
TOM1-206ENST00000425375 EIF2AK4Q9P2K8 1649 aaKnown RBP22.76■■□□□ 1.23
TOM1-206ENST00000425375 TSPOAP1O95153 1857 aa22.76■■□□□ 1.23
TOM1-206ENST00000425375 DEPDC5O75140 1603 aa22.75■■□□□ 1.23
TOM1-206ENST00000425375 RICTORQ6R327 1708 aa22.75■■□□□ 1.23
TOM1-206ENST00000425375 PPRC1Q5VV67 1664 aaKnown RBP22.74■■□□□ 1.23
TOM1-206ENST00000425375 A2MP01023 1474 aa22.74■■□□□ 1.23
TOM1-206ENST00000425375 KIF3BO15066 747 aa22.73■■□□□ 1.23
TOM1-206ENST00000425375 KIF13AQ9H1H9 1805 aa22.73■■□□□ 1.23
TOM1-206ENST00000425375 L3MBTL2Q969R5 705 aa22.71■■□□□ 1.23
TOM1-206ENST00000425375 ABCA6Q8N139 1617 aa22.7■■□□□ 1.22
TOM1-206ENST00000425375 KANK1Q14678 1352 aa22.7■■□□□ 1.22
TOM1-206ENST00000425375 FRMPD1Q5SYB0 1578 aa22.68■■□□□ 1.22
TOM1-206ENST00000425375 PRDM15P57071 1507 aaPredicted RBP22.67■■□□□ 1.22
TOM1-206ENST00000425375 VWDEQ8N2E2 1590 aa22.65■■□□□ 1.22
TOM1-206ENST00000425375 DIP2CQ9Y2E4 1556 aa22.65■■□□□ 1.22
TOM1-206ENST00000425375 MROH1Q8NDA8 1641 aa22.65■■□□□ 1.22
TOM1-206ENST00000425375 ZMYM4Q5VZL5 1548 aa22.64■■□□□ 1.21
TOM1-206ENST00000425375 CCDC144AA2RUR9 1427 aa22.64■■□□□ 1.21
TOM1-206ENST00000425375 RNF17Q9BXT8 1623 aaKnown RBP22.62■■□□□ 1.21
TOM1-206ENST00000425375 PLA2R1Q13018 1463 aa22.62■■□□□ 1.21
TOM1-206ENST00000425375 TET3O43151 1660 aa22.62■■□□□ 1.21
TOM1-206ENST00000425375 ATP10AO60312 1499 aa22.61■■□□□ 1.21
TOM1-206ENST00000425375 YEATS2Q9ULM3 1422 aa22.61■■□□□ 1.21
TOM1-206ENST00000425375 BCORL1Q5H9F3 1711 aa22.61■■□□□ 1.21
TOM1-206ENST00000425375 E9PCH4 1651 aa22.6■■□□□ 1.21
TOM1-206ENST00000425375 GGT6Q6P531 493 aa22.56■■□□□ 1.2
TOM1-206ENST00000425375 LMTK2Q8IWU2 1503 aa22.55■■□□□ 1.2
TOM1-206ENST00000425375 EFCAB6Q5THR3 1501 aa22.53■■□□□ 1.2
TOM1-206ENST00000425375 NBPF8Q3BBV2 869 aa22.52■■□□□ 1.2
TOM1-206ENST00000425375 TRPM2O94759 1503 aa22.52■■□□□ 1.2
TOM1-206ENST00000425375 PTPRTO14522 1441 aa22.51■■□□□ 1.19
TOM1-206ENST00000425375 SPHKAPQ2M3C7 1700 aa22.51■■□□□ 1.19
TOM1-206ENST00000425375 COL17A1Q9UMD9 1497 aaPredicted RBP22.51■■□□□ 1.19
TOM1-206ENST00000425375 CEP152O94986 1710 aa22.51■■□□□ 1.19
TOM1-206ENST00000425375 WASHC2CQ9Y4E1 1318 aa22.48■■□□□ 1.19
TOM1-206ENST00000425375 DCAF11Q8TEB1 546 aa22.48■■□□□ 1.19
TOM1-206ENST00000425375 ZNF326Q5BKZ1 582 aaKnown RBP22.47■■□□□ 1.19
TOM1-206ENST00000425375 DNAJC5Q9H3Z4 198 aa22.47■■□□□ 1.19
TOM1-206ENST00000425375 ABCC3O15438 1527 aa22.47■■□□□ 1.19
TOM1-206ENST00000425375 UHRF1BP1Q6BDS2 1440 aa22.46■■□□□ 1.19
TOM1-206ENST00000425375 REREQ9P2R6 1566 aa22.46■■□□□ 1.19
TOM1-206ENST00000425375 RGL3Q3MIN7 710 aa22.46■■□□□ 1.19
TOM1-206ENST00000425375 HIRIP3Q9BW71 556 aaPredicted RBP22.46■■□□□ 1.19
TOM1-206ENST00000425375 KDM2AQ9Y2K7 1162 aa22.45■■□□□ 1.18
TOM1-206ENST00000425375 EIF4G2P78344 907 aaKnown RBP eCLIP22.43■■□□□ 1.18
TOM1-206ENST00000425375 DDX10Q13206 875 aaKnown RBP22.43■■□□□ 1.18
TOM1-206ENST00000425375 CLTCL1P53675 1640 aa22.43■■□□□ 1.18
TOM1-206ENST00000425375 TRHP20396 242 aaPredicted RBP22.42■■□□□ 1.18
TOM1-206ENST00000425375 ARHGEF40Q8TER5 1519 aa22.42■■□□□ 1.18
TOM1-206ENST00000425375 NPATQ14207 1427 aa22.42■■□□□ 1.18
TOM1-206ENST00000425375 ZC3H13Q5T200 1668 aaKnown RBP22.41■■□□□ 1.18
TOM1-206ENST00000425375 SPATA31E1Q6ZUB1 1445 aa22.41■■□□□ 1.18
TOM1-206ENST00000425375 AGLP35573 1532 aa22.41■■□□□ 1.18
TOM1-206ENST00000425375 CAMSAP1Q5T5Y3 1602 aa22.4■■□□□ 1.18
TOM1-206ENST00000425375 HSPA5P11021 654 aaKnown RBP22.4■■□□□ 1.18
TOM1-206ENST00000425375 RALGAPBQ86X10 1494 aa22.38■■□□□ 1.17
TOM1-206ENST00000425375 PRAG1Q86YV5 1406 aa22.35■■□□□ 1.17
TOM1-206ENST00000425375 UGGT1Q9NYU2 1555 aa22.35■■□□□ 1.17
TOM1-206ENST00000425375 ARHGAP31Q2M1Z3 1444 aa22.35■■□□□ 1.17
TOM1-206ENST00000425375 CNTLNQ9NXG0 1405 aa22.35■■□□□ 1.17
TOM1-206ENST00000425375 NEURL4Q96JN8 1562 aa22.34■■□□□ 1.17
TOM1-206ENST00000425375 PPP6R1Q9UPN7 881 aa22.32■■□□□ 1.16
TOM1-206ENST00000425375 SIGLEC1Q9BZZ2 1709 aa22.32■■□□□ 1.16
TOM1-206ENST00000425375 NOS1P29475 1434 aa22.3■■□□□ 1.16
TOM1-206ENST00000425375 KIF1BO60333 1816 aa22.3■■□□□ 1.16
TOM1-206ENST00000425375 STAC3Q96MF2 364 aa22.3■■□□□ 1.16
TOM1-206ENST00000425375 CARD11Q9BXL7 1154 aa22.29■■□□□ 1.16
TOM1-206ENST00000425375 CFAP65Q6ZU64 1925 aaKnown RBP22.29■■□□□ 1.16
TOM1-206ENST00000425375 TRPM1Q7Z4N2 1603 aa22.29■■□□□ 1.16
TOM1-206ENST00000425375 ROCK2O75116 1388 aaKnown RBP22.28■■□□□ 1.16
TOM1-206ENST00000425375 USP47Q96K76 1375 aa22.28■■□□□ 1.16
TOM1-206ENST00000425375 MLECQ14165 292 aa22.25■■□□□ 1.15
TOM1-206ENST00000425375 SYNMO15061 1565 aa22.24■■□□□ 1.15
TOM1-206ENST00000425375 ADGRB3O60242 1522 aa22.24■■□□□ 1.15
TOM1-206ENST00000425375 MROH2AA6NES4 1674 aa22.23■■□□□ 1.15
TOM1-206ENST00000425375 MADDQ8WXG6 1647 aa22.23■■□□□ 1.15
TOM1-206ENST00000425375 CHGAP10645 457 aaKnown RBP22.23■■□□□ 1.15
TOM1-206ENST00000425375 PIK3C2BO00750 1634 aa22.22■■□□□ 1.15
TOM1-206ENST00000425375 CLTCQ00610 1675 aaKnown RBP22.22■■□□□ 1.15
TOM1-206ENST00000425375 PREX1Q8TCU6 1659 aa22.22■■□□□ 1.15
TOM1-206ENST00000425375 WASHC2AQ641Q2 1341 aa22.21■■□□□ 1.15
TOM1-206ENST00000425375 GPRASP1Q5JY77 1395 aa22.21■■□□□ 1.15
TOM1-206ENST00000425375 CCER2I3L3R5 266 aa22.21■■□□□ 1.15
TOM1-206ENST00000425375 ARID4BQ4LE39 1312 aaPredicted RBP22.21■■□□□ 1.15
TOM1-206ENST00000425375 NBPF1Q3BBV0 1214 aa22.2■■□□□ 1.15
TOM1-206ENST00000425375 ANP32CO43423 234 aa22.2■■□□□ 1.14
TOM1-206ENST00000425375 SLC52A1Q9NWF4 448 aa22.19■■□□□ 1.14
TOM1-206ENST00000425375 MYOM2P54296 1465 aa22.19■■□□□ 1.14
TOM1-206ENST00000425375 ESF1Q9H501 851 aaKnown RBP22.19■■□□□ 1.14
TOM1-206ENST00000425375 LAMC1P11047 1609 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms