RNA–Protein interactions for RNA: ENST00000425375.5

TOM1-206, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1, Length 2,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-206ENST00000425375 NISCHQ9Y2I1 1504 aa35.88■■■■□ 3.33
TOM1-206ENST00000425375 CCDC180Q9P1Z9 1646 aa31.27■■■□□ 2.6
TOM1-206ENST00000425375 ZCCHC6Q5VYS8 1495 aaKnown RBP30.14■■■□□ 2.42
TOM1-206ENST00000425375 DCAF8L2P0C7V8 631 aa29.7■■■□□ 2.34
TOM1-206ENST00000425375 DCAF1Q9Y4B6 1507 aa29.66■■■□□ 2.34
TOM1-206ENST00000425375 ABCC9O60706 1549 aa29.6■■■□□ 2.33
TOM1-206ENST00000425375 SHROOM4Q9ULL8 1493 aa29.3■■■□□ 2.28
TOM1-206ENST00000425375 MYO15BQ96JP2 1530 aa29.3■■■□□ 2.28
TOM1-206ENST00000425375 NACADO15069 1562 aa29.14■■■□□ 2.26
TOM1-206ENST00000425375 RB1CC1Q8TDY2 1594 aa28.9■■■□□ 2.22
TOM1-206ENST00000425375 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
TOM1-206ENST00000425375 UNC13AQ9UPW8 1703 aa28.28■■■□□ 2.12
TOM1-206ENST00000425375 SUPT5HO00267 1087 aaKnown RBP28.21■■■□□ 2.11
TOM1-206ENST00000425375 BICRAQ9NZM4 1560 aa28■■■□□ 2.07
TOM1-206ENST00000425375 PABPN1Q86U42 306 aaKnown RBP eCLIP27.93■■■□□ 2.06
TOM1-206ENST00000425375 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
TOM1-206ENST00000425375 RSF1Q96T23 1441 aaPredicted RBP27.84■■■□□ 2.05
TOM1-206ENST00000425375 MROH2BQ7Z745 1585 aa27.72■■■□□ 2.03
TOM1-206ENST00000425375 BAZ1AQ9NRL2 1556 aaPredicted RBP27.72■■■□□ 2.03
TOM1-206ENST00000425375 SMARCA4P51532 1647 aa27.58■■■□□ 2
TOM1-206ENST00000425375 WIZO95785 1651 aa27.49■■□□□ 1.99
TOM1-206ENST00000425375 PEG3Q9GZU2 1588 aa27.24■■□□□ 1.95
TOM1-206ENST00000425375 TOP2AP11388 1531 aaKnown RBP27.21■■□□□ 1.95
TOM1-206ENST00000425375 EIF4G1Q04637 1599 aaKnown RBP27.19■■□□□ 1.94
TOM1-206ENST00000425375 ATAD2BQ9ULI0 1458 aa27.13■■□□□ 1.93
TOM1-206ENST00000425375 SMARCA2P51531 1590 aa27.12■■□□□ 1.93
TOM1-206ENST00000425375 BAZ1BQ9UIG0 1483 aaKnown RBP26.99■■□□□ 1.91
TOM1-206ENST00000425375 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
TOM1-206ENST00000425375 CCDC88BA6NC98 1476 aa26.94■■□□□ 1.9
TOM1-206ENST00000425375 NCAPD3P42695 1498 aa26.9■■□□□ 1.9
TOM1-206ENST00000425375 HMGXB3Q12766 1538 aa26.86■■□□□ 1.89
TOM1-206ENST00000425375 CC2D2AQ9P2K1 1620 aa26.78■■□□□ 1.88
TOM1-206ENST00000425375 TRIM41Q8WV44 630 aa26.53■■□□□ 1.84
TOM1-206ENST00000425375 ABCC8Q09428 1581 aa26.38■■□□□ 1.81
TOM1-206ENST00000425375 CFTRP13569 1480 aa26.31■■□□□ 1.8
TOM1-206ENST00000425375 CADPSQ9ULU8 1353 aa26.22■■□□□ 1.79
TOM1-206ENST00000425375 WRNQ14191 1432 aaPredicted RBP eCLIP26.22■■□□□ 1.79
TOM1-206ENST00000425375 PRDM2Q13029 1718 aa26.14■■□□□ 1.77
TOM1-206ENST00000425375 DNAJC5BQ9UF47 199 aa26.09■■□□□ 1.77
TOM1-206ENST00000425375 SYNJ1O43426 1573 aa26.09■■□□□ 1.77
TOM1-206ENST00000425375 FAM9AQ8IZU1 332 aaPredicted RBP26.04■■□□□ 1.76
TOM1-206ENST00000425375 TOP2BQ02880 1626 aa25.99■■□□□ 1.75
TOM1-206ENST00000425375 LAMC3Q9Y6N6 1575 aa25.99■■□□□ 1.75
TOM1-206ENST00000425375 NESP48681 1621 aa25.98■■□□□ 1.75
TOM1-206ENST00000425375 BIVM-ERCC5R4GMW8 1640 aa25.95■■□□□ 1.74
TOM1-206ENST00000425375 LOC105371045A0A1W2PR82 267 aa25.95■■□□□ 1.74
TOM1-206ENST00000425375 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
TOM1-206ENST00000425375 CUX1P39880 1505 aa25.92■■□□□ 1.74
TOM1-206ENST00000425375 SOGA1O94964 1423 aa25.89■■□□□ 1.74
TOM1-206ENST00000425375 EEA1Q15075 1411 aa25.84■■□□□ 1.73
TOM1-206ENST00000425375 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
TOM1-206ENST00000425375 CEP164Q9UPV0 1460 aa25.78■■□□□ 1.72
TOM1-206ENST00000425375 RUSC2Q8N2Y8 1516 aa25.78■■□□□ 1.72
TOM1-206ENST00000425375 CSRNP3Q8WYN3 585 aa25.71■■□□□ 1.71
TOM1-206ENST00000425375 DNMBPQ6XZF7 1577 aa25.69■■□□□ 1.7
TOM1-206ENST00000425375 EHMT2Q96KQ7 1210 aa25.68■■□□□ 1.7
TOM1-206ENST00000425375 KIF21AQ7Z4S6 1674 aa25.66■■□□□ 1.7
TOM1-206ENST00000425375 FGD5Q6ZNL6 1462 aa25.65■■□□□ 1.7
TOM1-206ENST00000425375 TOPBP1Q92547 1522 aa25.64■■□□□ 1.7
TOM1-206ENST00000425375 URB2Q14146 1524 aaKnown RBP25.6■■□□□ 1.69
TOM1-206ENST00000425375 KIF27Q86VH2 1401 aa25.56■■□□□ 1.68
TOM1-206ENST00000425375 PCGF6Q9BYE7 350 aa25.56■■□□□ 1.68
TOM1-206ENST00000425375 POLA1P09884 1462 aaPredicted RBP25.53■■□□□ 1.68
TOM1-206ENST00000425375 HRCP23327 699 aa25.52■■□□□ 1.68
TOM1-206ENST00000425375 CUX2O14529 1486 aa25.49■■□□□ 1.67
TOM1-206ENST00000425375 GOLGA3Q08378 1498 aa25.49■■□□□ 1.67
TOM1-206ENST00000425375 KIF21BO75037 1637 aa25.49■■□□□ 1.67
TOM1-206ENST00000425375 MRC2Q9UBG0 1479 aa25.46■■□□□ 1.67
TOM1-206ENST00000425375 RAD54L2Q9Y4B4 1467 aa25.44■■□□□ 1.66
TOM1-206ENST00000425375 ABCA10Q8WWZ4 1543 aa25.41■■□□□ 1.66
TOM1-206ENST00000425375 UBTFP17480 764 aaKnown RBP25.4■■□□□ 1.66
TOM1-206ENST00000425375 ERCC6Q03468 1493 aa25.4■■□□□ 1.66
TOM1-206ENST00000425375 TNIKQ9UKE5 1360 aa25.4■■□□□ 1.66
TOM1-206ENST00000425375 PRXQ9BXM0 1461 aa25.37■■□□□ 1.65
TOM1-206ENST00000425375 RAPGEF2Q9Y4G8 1499 aa25.36■■□□□ 1.65
TOM1-206ENST00000425375 ERICH3Q5RHP9 1530 aa25.33■■□□□ 1.65
TOM1-206ENST00000425375 IGF1RP08069 1367 aa25.32■■□□□ 1.64
TOM1-206ENST00000425375 WDR62O43379 1518 aa25.32■■□□□ 1.64
TOM1-206ENST00000425375 WDR97A6NE52 1622 aa25.31■■□□□ 1.64
TOM1-206ENST00000425375 CEP162Q5TB80 1403 aa25.28■■□□□ 1.64
TOM1-206ENST00000425375 TARBP1Q13395 1621 aaKnown RBP25.25■■□□□ 1.63
TOM1-206ENST00000425375 THOC2Q8NI27 1593 aaKnown RBP25.23■■□□□ 1.63
TOM1-206ENST00000425375 TRIM26Q12899 539 aaPredicted RBP25.21■■□□□ 1.63
TOM1-206ENST00000425375 TDRD9Q8NDG6 1382 aaKnown RBP25.2■■□□□ 1.63
TOM1-206ENST00000425375 ABCA5Q8WWZ7 1642 aa25.2■■□□□ 1.62
TOM1-206ENST00000425375 CARMIL1Q5VZK9 1371 aa25.2■■□□□ 1.62
TOM1-206ENST00000425375 GAPVD1Q14C86 1478 aa25.17■■□□□ 1.62
TOM1-206ENST00000425375 IFT140Q96RY7 1462 aa25.15■■□□□ 1.62
TOM1-206ENST00000425375 CUL7Q14999 1698 aa25.12■■□□□ 1.61
TOM1-206ENST00000425375 CLIP1P30622 1438 aa25.08■■□□□ 1.61
TOM1-206ENST00000425375 AQRO60306 1485 aaKnown RBP eCLIP25.04■■□□□ 1.63e-6■■■□□ 15.4
TOM1-206ENST00000425375 ZNF608Q9ULD9 1512 aaPredicted RBP25.01■■□□□ 1.59
TOM1-206ENST00000425375 PBRM1Q86U86 1689 aa25■■□□□ 1.59
TOM1-206ENST00000425375 RANGAP1P46060 587 aaPredicted RBP25■■□□□ 1.59
TOM1-206ENST00000425375 GRIN2BQ13224 1484 aa24.97■■□□□ 1.59
TOM1-206ENST00000425375 EIF4G3O43432 1585 aaKnown RBP24.93■■□□□ 1.58
TOM1-206ENST00000425375 PPARGC1BQ86YN6 1023 aaKnown RBP24.91■■□□□ 1.58
TOM1-206ENST00000425375 FHAD1B1AJZ9 1412 aa24.9■■□□□ 1.58
TOM1-206ENST00000425375 ADAMTS12P58397 1594 aa24.88■■□□□ 1.57
TOM1-206ENST00000425375 VPS8Q8N3P4 1428 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms