RNA–Protein interactions for RNA: ENST00000424702.1

LSM8-204, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 4,030 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-204ENST00000424702 CDC42BPAQ5VT25 1732 aa10.2□□□□□ -0.78
LSM8-204ENST00000424702 EID1Q9Y6B2 187 aa10.2□□□□□ -0.78
LSM8-204ENST00000424702 NAIPQ13075 1403 aa10.19□□□□□ -0.78
LSM8-204ENST00000424702 CCDC144AA2RUR9 1427 aa10.18□□□□□ -0.78
LSM8-204ENST00000424702 ADGBQ8N7X0 1667 aa10.17□□□□□ -0.78
LSM8-204ENST00000424702 MAP3K4Q9Y6R4 1608 aa10.17□□□□□ -0.78
LSM8-204ENST00000424702 LRRIQ1Q96JM4 1722 aa10.17□□□□□ -0.78
LSM8-204ENST00000424702 STAC3Q96MF2 364 aa10.17□□□□□ -0.78
LSM8-204ENST00000424702 PTPRKQ15262 1439 aa10.17□□□□□ -0.78
LSM8-204ENST00000424702 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.16□□□□□ -0.78
LSM8-204ENST00000424702 MBD5Q9P267 1494 aa10.16□□□□□ -0.78
LSM8-204ENST00000424702 MAST1Q9Y2H9 1570 aa10.16□□□□□ -0.78
LSM8-204ENST00000424702 SLC52A1Q9NWF4 448 aa10.16□□□□□ -0.78
LSM8-204ENST00000424702 FOXD1Q16676 465 aa10.15□□□□□ -0.78
LSM8-204ENST00000424702 CDC42BPBQ9Y5S2 1711 aa10.13□□□□□ -0.79
LSM8-204ENST00000424702 SLC24A1O60721 1099 aa10.13□□□□□ -0.79
LSM8-204ENST00000424702 RGL3Q3MIN7 710 aa10.13□□□□□ -0.79
LSM8-204ENST00000424702 PLXNC1O60486 1568 aa10.13□□□□□ -0.79
LSM8-204ENST00000424702 THEMISQ8N1K5 641 aaPredicted RBP10.12□□□□□ -0.79
LSM8-204ENST00000424702 ZMYM4Q5VZL5 1548 aa10.11□□□□□ -0.79
LSM8-204ENST00000424702 POLR3GLQ9BT43 218 aa10.11□□□□□ -0.79
LSM8-204ENST00000424702 KDM2AQ9Y2K7 1162 aa10.11□□□□□ -0.79
LSM8-204ENST00000424702 VGFO15240 615 aaPredicted RBP10.11□□□□□ -0.79
LSM8-204ENST00000424702 YEATS2Q9ULM3 1422 aa10.1□□□□□ -0.79
LSM8-204ENST00000424702 FAM135AQ9P2D6 1515 aa10.1□□□□□ -0.79
LSM8-204ENST00000424702 ARHGEF40Q8TER5 1519 aa10.1□□□□□ -0.79
LSM8-204ENST00000424702 CENPBP07199 599 aaPredicted RBP10.1□□□□□ -0.79
LSM8-204ENST00000424702 TNRQ92752 1358 aa10.09□□□□□ -0.79
LSM8-204ENST00000424702 KDM5CP41229 1560 aa10.08□□□□□ -0.8
LSM8-204ENST00000424702 RPGRIP1LQ68CZ1 1315 aa10.08□□□□□ -0.8
LSM8-204ENST00000424702 ARHGEF12Q9NZN5 1544 aa10.08□□□□□ -0.8
LSM8-204ENST00000424702 C14orf37Q86TY3 774 aa10.07□□□□□ -0.8
LSM8-204ENST00000424702 EIF4G2P78344 907 aaKnown RBP eCLIP10.07□□□□□ -0.8
LSM8-204ENST00000424702 GCC2Q8IWJ2 1684 aa10.07□□□□□ -0.8
LSM8-204ENST00000424702 AGLP35573 1532 aa10.07□□□□□ -0.8
LSM8-204ENST00000424702 INO80Q9ULG1 1556 aaPredicted RBP10.06□□□□□ -0.8
LSM8-204ENST00000424702 EIF2AK4Q9P2K8 1649 aaKnown RBP10.06□□□□□ -0.8
LSM8-204ENST00000424702 CROCC2H7BZ55 1655 aa10.06□□□□□ -0.8
LSM8-204ENST00000424702 DCAF11Q8TEB1 546 aa10.06□□□□□ -0.8
LSM8-204ENST00000424702 L3MBTL2Q969R5 705 aa10.06□□□□□ -0.8
LSM8-204ENST00000424702 KDM5DQ9BY66 1539 aa10.06□□□□□ -0.8
LSM8-204ENST00000424702 CDCA8Q53HL2 280 aa10.05□□□□□ -0.8
LSM8-204ENST00000424702 YTHDC1Q96MU7 727 aaKnown RBP10.05□□□□□ -0.8
LSM8-204ENST00000424702 HIRIP3Q9BW71 556 aaPredicted RBP10.05□□□□□ -0.8
LSM8-204ENST00000424702 RPRD2Q5VT52 1461 aaKnown RBP10.04□□□□□ -0.8
LSM8-204ENST00000424702 EIF3AQ14152 1382 aaKnown RBP10.04□□□□□ -0.8
LSM8-204ENST00000424702 ANKRD30BQ9BXX2 1392 aa10.04□□□□□ -0.8
LSM8-204ENST00000424702 ANKLE2Q86XL3 938 aa10.04□□□□□ -0.8
LSM8-204ENST00000424702 DIP2CQ9Y2E4 1556 aa10.04□□□□□ -0.8
LSM8-204ENST00000424702 DMRT2Q9Y5R5 561 aa10.04□□□□□ -0.8
LSM8-204ENST00000424702 KIF13AQ9H1H9 1805 aa10.04□□□□□ -0.8
LSM8-204ENST00000424702 POGKQ9P215 609 aa10.04□□□□□ -0.8
LSM8-204ENST00000424702 DDX10Q13206 875 aaKnown RBP10.03□□□□□ -0.8
LSM8-204ENST00000424702 ZMYM3Q14202 1370 aa10.03□□□□□ -0.8
LSM8-204ENST00000424702 UHRF1BP1Q6BDS2 1440 aa10.03□□□□□ -0.8
LSM8-204ENST00000424702 ANP32CO43423 234 aa10.02□□□□□ -0.8
LSM8-204ENST00000424702 TXNDC2Q86VQ3 553 aa10.01□□□□□ -0.81
LSM8-204ENST00000424702 CARD11Q9BXL7 1154 aa10.01□□□□□ -0.81
LSM8-204ENST00000424702 REREQ9P2R6 1566 aa10.01□□□□□ -0.81
LSM8-204ENST00000424702 ABCA6Q8N139 1617 aa9.99□□□□□ -0.81
LSM8-204ENST00000424702 RICTORQ6R327 1708 aa9.99□□□□□ -0.81
LSM8-204ENST00000424702 KIDINS220Q9ULH0 1771 aa9.98□□□□□ -0.81
LSM8-204ENST00000424702 ARHGAP31Q2M1Z3 1444 aa9.98□□□□□ -0.81
LSM8-204ENST00000424702 NLRP1Q9C000 1473 aa9.97□□□□□ -0.81
LSM8-204ENST00000424702 ROCK2O75116 1388 aaKnown RBP9.97□□□□□ -0.81
LSM8-204ENST00000424702 CEBPAP49715 358 aaPredicted RBP9.97□□□□□ -0.81
LSM8-204ENST00000424702 ABCC3O15438 1527 aa9.97□□□□□ -0.81
LSM8-204ENST00000424702 ZC3H13Q5T200 1668 aaKnown RBP9.97□□□□□ -0.81
LSM8-204ENST00000424702 HSPA5P11021 654 aaKnown RBP9.97□□□□□ -0.81
LSM8-204ENST00000424702 NPATQ14207 1427 aa9.97□□□□□ -0.81
LSM8-204ENST00000424702 UNC13BO14795 1591 aa9.96□□□□□ -0.81
LSM8-204ENST00000424702 PZPP20742 1482 aa9.96□□□□□ -0.81
LSM8-204ENST00000424702 TET3O43151 1660 aa9.96□□□□□ -0.81
LSM8-204ENST00000424702 MIER1Q8N108 512 aa9.96□□□□□ -0.81
LSM8-204ENST00000424702 FBXO31Q5XUX0 539 aaPredicted RBP9.96□□□□□ -0.82
LSM8-204ENST00000424702 COL17A1Q9UMD9 1497 aaPredicted RBP9.96□□□□□ -0.82
LSM8-204ENST00000424702 PRDM15P57071 1507 aaPredicted RBP9.96□□□□□ -0.82
LSM8-204ENST00000424702 CNGB1Q14028 1251 aaPredicted RBP9.96□□□□□ -0.82
LSM8-204ENST00000424702 IDI1Q13907 227 aa9.95□□□□□ -0.82
LSM8-204ENST00000424702 LMTK2Q8IWU2 1503 aa9.94□□□□□ -0.82
LSM8-204ENST00000424702 IQGAP3Q86VI3 1631 aa9.94□□□□□ -0.82
LSM8-204ENST00000424702 EFCAB6Q5THR3 1501 aa9.93□□□□□ -0.82
LSM8-204ENST00000424702 ERVK-7P63135 1459 aa9.93□□□□□ -0.82
LSM8-204ENST00000424702 RNF17Q9BXT8 1623 aaKnown RBP9.93□□□□□ -0.82
LSM8-204ENST00000424702 TMF1P82094 1093 aa9.93□□□□□ -0.82
LSM8-204ENST00000424702 PPRC1Q5VV67 1664 aaKnown RBP9.93□□□□□ -0.82
LSM8-204ENST00000424702 FRMPD1Q5SYB0 1578 aa9.92□□□□□ -0.82
LSM8-204ENST00000424702 SENP3Q9H4L4 574 aaPredicted RBP9.92□□□□□ -0.82
LSM8-204ENST00000424702 STK26Q9P289 416 aa9.92□□□□□ -0.82
LSM8-204ENST00000424702 RIMS2Q9UQ26 1411 aa9.92□□□□□ -0.82
LSM8-204ENST00000424702 NUTM2DQ5VT03 806 aaPredicted RBP9.91□□□□□ -0.82
LSM8-204ENST00000424702 PHF23Q9BUL5 403 aaPredicted RBP9.9□□□□□ -0.83
LSM8-204ENST00000424702 TRPM2O94759 1503 aa9.89□□□□□ -0.83
LSM8-204ENST00000424702 A2ML1A8K2U0 1454 aa9.89□□□□□ -0.83
LSM8-204ENST00000424702 NBPF8Q3BBV2 869 aa9.88□□□□□ -0.83
LSM8-204ENST00000424702 CAMSAP1Q5T5Y3 1602 aa9.88□□□□□ -0.83
LSM8-204ENST00000424702 SRPK2P78362 688 aaKnown RBP9.88□□□□□ -0.83
LSM8-204ENST00000424702 PROSER2Q86WR7 435 aaPredicted RBP9.87□□□□□ -0.83
LSM8-204ENST00000424702 PTPRTO14522 1441 aa9.87□□□□□ -0.83
LSM8-204ENST00000424702 CLTCQ00610 1675 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms