RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 RSPH4AQ5TD94 716 aa19.67■□□□□ 0.74
MSH5-206ENST00000423982 MRS2Q9HD23 443 aa19.67■□□□□ 0.74
MSH5-206ENST00000423982 CNTLNQ9NXG0 1405 aa19.67■□□□□ 0.74
MSH5-206ENST00000423982 PRKRIP1Q9H875 184 aaPredicted RBP19.67■□□□□ 0.74
MSH5-206ENST00000423982 GCC2Q8IWJ2 1684 aa19.66■□□□□ 0.74
MSH5-206ENST00000423982 ARAP3Q8WWN8 1544 aa19.66■□□□□ 0.74
MSH5-206ENST00000423982 ANKRD50Q9ULJ7 1429 aa19.66■□□□□ 0.74
MSH5-206ENST00000423982 SHANK2Q9UPX8 1470 aa19.65■□□□□ 0.74
MSH5-206ENST00000423982 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.65■□□□□ 0.744e-7■■□□□ 12.9
MSH5-206ENST00000423982 ADGBQ8N7X0 1667 aa19.65■□□□□ 0.74
MSH5-206ENST00000423982 SENP3-EIF4A1A0A087X0R7 540 aa19.65■□□□□ 0.74
MSH5-206ENST00000423982 ADGRL2O95490 1459 aa19.64■□□□□ 0.73
MSH5-206ENST00000423982 MPHOSPH9Q99550 1183 aa19.62■□□□□ 0.73
MSH5-206ENST00000423982 MAP3K4Q9Y6R4 1608 aa19.62■□□□□ 0.73
MSH5-206ENST00000423982 CCDC7Q96M83 1385 aa19.61■□□□□ 0.73
MSH5-206ENST00000423982 NBPF8Q3BBV2 869 aa19.61■□□□□ 0.73
MSH5-206ENST00000423982 SLC4A1APQ9BWU0 796 aaKnown RBP19.6■□□□□ 0.73
MSH5-206ENST00000423982 GLI2P10070 1586 aa19.57■□□□□ 0.72
MSH5-206ENST00000423982 ERICH6BQ5W0A0 696 aa19.57■□□□□ 0.72
MSH5-206ENST00000423982 ZBED9Q6R2W3 1325 aa19.56■□□□□ 0.72
MSH5-206ENST00000423982 NUP155O75694 1391 aa19.56■□□□□ 0.72
MSH5-206ENST00000423982 KIF13AQ9H1H9 1805 aa19.56■□□□□ 0.72
MSH5-206ENST00000423982 ZFYVE16Q7Z3T8 1539 aa19.56■□□□□ 0.72
MSH5-206ENST00000423982 ZNF518AQ6AHZ1 1483 aa19.56■□□□□ 0.72
MSH5-206ENST00000423982 POGZQ7Z3K3 1410 aa19.55■□□□□ 0.72
MSH5-206ENST00000423982 KIF7Q2M1P5 1343 aa19.54■□□□□ 0.72
MSH5-206ENST00000423982 ATP7AQ04656 1500 aa19.54■□□□□ 0.72
MSH5-206ENST00000423982 NEO1Q92859 1461 aa19.54■□□□□ 0.72
MSH5-206ENST00000423982 CFAP74Q9C0B2 1584 aa19.53■□□□□ 0.72
MSH5-206ENST00000423982 MAST1Q9Y2H9 1570 aa19.52■□□□□ 0.72
MSH5-206ENST00000423982 PAK3O75914 559 aaPredicted RBP19.52■□□□□ 0.72
MSH5-206ENST00000423982 KIF3BO15066 747 aa19.51■□□□□ 0.71
MSH5-206ENST00000423982 POLR3GLQ9BT43 218 aa19.51■□□□□ 0.71
MSH5-206ENST00000423982 PPRC1Q5VV67 1664 aaKnown RBP19.5■□□□□ 0.71
MSH5-206ENST00000423982 NBR1Q14596 966 aa19.5■□□□□ 0.71
MSH5-206ENST00000423982 PKD2Q13563 968 aa19.5■□□□□ 0.71
MSH5-206ENST00000423982 DEKP35659 375 aaKnown RBP19.49■□□□□ 0.71
MSH5-206ENST00000423982 PLXNC1O60486 1568 aa19.48■□□□□ 0.71
MSH5-206ENST00000423982 INO80Q9ULG1 1556 aaPredicted RBP19.48■□□□□ 0.71
MSH5-206ENST00000423982 DUOX2Q9NRD8 1548 aa19.47■□□□□ 0.71
MSH5-206ENST00000423982 RTEL1-TNFRSF6BF6WH68 1400 aa19.47■□□□□ 0.71
MSH5-206ENST00000423982 PZPP20742 1482 aa19.47■□□□□ 0.71
MSH5-206ENST00000423982 TEX14Q8IWB6 1497 aa19.47■□□□□ 0.71
MSH5-206ENST00000423982 KIDINS220Q9ULH0 1771 aa19.47■□□□□ 0.71
MSH5-206ENST00000423982 YEATS2Q9ULM3 1422 aa19.46■□□□□ 0.71
MSH5-206ENST00000423982 COL17A1Q9UMD9 1497 aaPredicted RBP19.46■□□□□ 0.71
MSH5-206ENST00000423982 ANKRD30BQ9BXX2 1392 aa19.45■□□□□ 0.7
MSH5-206ENST00000423982 GGT6Q6P531 493 aa19.45■□□□□ 0.7
MSH5-206ENST00000423982 NOP58Q9Y2X3 529 aaKnown RBP19.45■□□□□ 0.7
MSH5-206ENST00000423982 KDM5CP41229 1560 aa19.43■□□□□ 0.7
MSH5-206ENST00000423982 SPATA31E1Q6ZUB1 1445 aa19.43■□□□□ 0.7
MSH5-206ENST00000423982 HECW2Q9P2P5 1572 aa19.43■□□□□ 0.7
MSH5-206ENST00000423982 RPRD2Q5VT52 1461 aaKnown RBP19.43■□□□□ 0.7
MSH5-206ENST00000423982 ZNF326Q5BKZ1 582 aaKnown RBP19.42■□□□□ 0.7
MSH5-206ENST00000423982 ERBINQ96RT1 1412 aa19.42■□□□□ 0.7
MSH5-206ENST00000423982 RICTORQ6R327 1708 aa19.42■□□□□ 0.7
MSH5-206ENST00000423982 DHX29Q7Z478 1369 aaKnown RBP19.41■□□□□ 0.7
MSH5-206ENST00000423982 FRMPD1Q5SYB0 1578 aa19.4■□□□□ 0.7
MSH5-206ENST00000423982 A2MP01023 1474 aa19.4■□□□□ 0.7
MSH5-206ENST00000423982 MLH3Q9UHC1 1453 aa19.4■□□□□ 0.7
MSH5-206ENST00000423982 ABCA6Q8N139 1617 aa19.39■□□□□ 0.7
MSH5-206ENST00000423982 CCDC136Q96JN2 1154 aa19.38■□□□□ 0.69
MSH5-206ENST00000423982 FAM135AQ9P2D6 1515 aa19.38■□□□□ 0.69
MSH5-206ENST00000423982 SMG6Q86US8 1419 aaKnown RBP19.37■□□□□ 0.69
MSH5-206ENST00000423982 NUDCQ9Y266 331 aa19.37■□□□□ 0.69
MSH5-206ENST00000423982 MLECQ14165 292 aa19.36■□□□□ 0.69
MSH5-206ENST00000423982 DIP2CQ9Y2E4 1556 aa19.34■□□□□ 0.69
MSH5-206ENST00000423982 POLR1AO95602 1720 aaPredicted RBP19.34■□□□□ 0.69
MSH5-206ENST00000423982 BCORL1Q5H9F3 1711 aa19.34■□□□□ 0.69
MSH5-206ENST00000423982 UNC13BO14795 1591 aa19.32■□□□□ 0.68
MSH5-206ENST00000423982 KANK1Q14678 1352 aa19.29■□□□□ 0.68
MSH5-206ENST00000423982 USP47Q96K76 1375 aa19.29■□□□□ 0.68
MSH5-206ENST00000423982 KDM5DQ9BY66 1539 aa19.29■□□□□ 0.68
MSH5-206ENST00000423982 RNF123Q5XPI4 1314 aa19.29■□□□□ 0.68
MSH5-206ENST00000423982 WASHC2CQ9Y4E1 1318 aa19.28■□□□□ 0.68
MSH5-206ENST00000423982 ARID4BQ4LE39 1312 aaPredicted RBP19.28■□□□□ 0.68
MSH5-206ENST00000423982 PNISRQ8TF01 805 aaKnown RBP19.27■□□□□ 0.67
MSH5-206ENST00000423982 IPO9Q96P70 1041 aaKnown RBP19.27■□□□□ 0.67
MSH5-206ENST00000423982 ANP32AP39687 249 aaKnown RBP19.26■□□□□ 0.67
MSH5-206ENST00000423982 RGL3Q3MIN7 710 aa19.26■□□□□ 0.67
MSH5-206ENST00000423982 MAGI2Q86UL8 1455 aa19.26■□□□□ 0.67
MSH5-206ENST00000423982 IQGAP3Q86VI3 1631 aa19.26■□□□□ 0.67
MSH5-206ENST00000423982 ZMYM4Q5VZL5 1548 aa19.25■□□□□ 0.67
MSH5-206ENST00000423982 SALL2Q9Y467 1007 aaPredicted RBP19.25■□□□□ 0.67
MSH5-206ENST00000423982 TMC1Q8TDI8 760 aa19.25■□□□□ 0.67
MSH5-206ENST00000423982 MROH1Q8NDA8 1641 aa19.24■□□□□ 0.67
MSH5-206ENST00000423982 ATP10AO60312 1499 aa19.24■□□□□ 0.67
MSH5-206ENST00000423982 NPM2Q86SE8 214 aaKnown RBP19.23■□□□□ 0.67
MSH5-206ENST00000423982 DEPDC5O75140 1603 aa19.22■□□□□ 0.67
MSH5-206ENST00000423982 ZBTB47Q9UFB7 747 aaPredicted RBP19.22■□□□□ 0.67
MSH5-206ENST00000423982 EIF2AK4Q9P2K8 1649 aaKnown RBP19.22■□□□□ 0.67
MSH5-206ENST00000423982 KDM2AQ9Y2K7 1162 aa19.22■□□□□ 0.67
MSH5-206ENST00000423982 PRDM15P57071 1507 aaPredicted RBP19.21■□□□□ 0.67
MSH5-206ENST00000423982 CFAP65Q6ZU64 1925 aaKnown RBP19.21■□□□□ 0.67
MSH5-206ENST00000423982 PLA2R1Q13018 1463 aa19.2■□□□□ 0.66
MSH5-206ENST00000423982 CCDC144AA2RUR9 1427 aa19.2■□□□□ 0.66
MSH5-206ENST00000423982 PLPPR3Q6T4P5 718 aa19.2■□□□□ 0.66
MSH5-206ENST00000423982 CEP152O94986 1710 aa19.2■□□□□ 0.66
MSH5-206ENST00000423982 SIGLEC1Q9BZZ2 1709 aa19.2■□□□□ 0.66
MSH5-206ENST00000423982 EXOC6Q8TAG9 804 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms