RNA–Protein interactions for RNA: ENST00000423536.5

SNHG17-204, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2 BASIC

Gene SNHG17, Length 517 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-204ENST00000423536 KIAA1107Q9UPP5 1409 aa13.33□□□□□ -0.28
SNHG17-204ENST00000423536 POTEAQ6S8J7 498 aa13.33□□□□□ -0.28
SNHG17-204ENST00000423536 FAM135AQ9P2D6 1515 aa13.33□□□□□ -0.28
SNHG17-204ENST00000423536 GPATCH8Q9UKJ3 1502 aaKnown RBP13.32□□□□□ -0.28
SNHG17-204ENST00000423536 DHX29Q7Z478 1369 aaKnown RBP13.32□□□□□ -0.28
SNHG17-204ENST00000423536 CASKIN1Q8WXD9 1431 aa13.31□□□□□ -0.28
SNHG17-204ENST00000423536 MIA2Q96PC5 1412 aa13.31□□□□□ -0.28
SNHG17-204ENST00000423536 CDC42BPAQ5VT25 1732 aa13.3□□□□□ -0.28
SNHG17-204ENST00000423536 TSPY4P0CV99 314 aa13.29□□□□□ -0.28
SNHG17-204ENST00000423536 TSPY10P0CW01 314 aa13.29□□□□□ -0.28
SNHG17-204ENST00000423536 RSPH4AQ5TD94 716 aa13.29□□□□□ -0.28
SNHG17-204ENST00000423536 EID1Q9Y6B2 187 aa13.29□□□□□ -0.28
SNHG17-204ENST00000423536 POLR1AO95602 1720 aaPredicted RBP13.29□□□□□ -0.28
SNHG17-204ENST00000423536 ZNF644Q9H582 1327 aaPredicted RBP13.29□□□□□ -0.28
SNHG17-204ENST00000423536 UGGT1Q9NYU2 1555 aa13.28□□□□□ -0.28
SNHG17-204ENST00000423536 TXNDC2Q86VQ3 553 aa13.28□□□□□ -0.28
SNHG17-204ENST00000423536 MTUS2Q5JR59 1369 aa13.27□□□□□ -0.29
SNHG17-204ENST00000423536 LRRC7Q96NW7 1537 aa13.27□□□□□ -0.29
SNHG17-204ENST00000423536 LRRIQ1Q96JM4 1722 aa13.27□□□□□ -0.29
SNHG17-204ENST00000423536 MED14O60244 1454 aa13.26□□□□□ -0.29
SNHG17-204ENST00000423536 VWDEQ8N2E2 1590 aa13.26□□□□□ -0.29
SNHG17-204ENST00000423536 NEURL4Q96JN8 1562 aa13.26□□□□□ -0.29
SNHG17-204ENST00000423536 NLRP1Q9C000 1473 aa13.26□□□□□ -0.29
SNHG17-204ENST00000423536 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
SNHG17-204ENST00000423536 ADGBQ8N7X0 1667 aa13.25□□□□□ -0.29
SNHG17-204ENST00000423536 PLXNC1O60486 1568 aa13.24□□□□□ -0.29
SNHG17-204ENST00000423536 PZPP20742 1482 aa13.24□□□□□ -0.29
SNHG17-204ENST00000423536 RTEL1-TNFRSF6BF6WH68 1400 aa13.24□□□□□ -0.29
SNHG17-204ENST00000423536 PROSER2Q86WR7 435 aaPredicted RBP13.24□□□□□ -0.29
SNHG17-204ENST00000423536 MEX3CQ5U5Q3 659 aaKnown RBP13.23□□□□□ -0.29
SNHG17-204ENST00000423536 BCANQ96GW7 911 aa13.23□□□□□ -0.29
SNHG17-204ENST00000423536 INO80Q9ULG1 1556 aaPredicted RBP13.22□□□□□ -0.29
SNHG17-204ENST00000423536 DEPDC5O75140 1603 aa13.21□□□□□ -0.29
SNHG17-204ENST00000423536 FAM135BQ49AJ0 1406 aa13.21□□□□□ -0.3
SNHG17-204ENST00000423536 ALKQ9UM73 1620 aa13.21□□□□□ -0.3
SNHG17-204ENST00000423536 KDM5DQ9BY66 1539 aa13.2□□□□□ -0.3
SNHG17-204ENST00000423536 TRIM52Q96A61 297 aa13.2□□□□□ -0.3
SNHG17-204ENST00000423536 IQGAP1P46940 1657 aa13.2□□□□□ -0.3
SNHG17-204ENST00000423536 FYCO1Q9BQS8 1478 aa13.19□□□□□ -0.3
SNHG17-204ENST00000423536 LTKP29376 864 aa13.19□□□□□ -0.3
SNHG17-204ENST00000423536 UPF1Q92900 1129 aaKnown RBP eCLIP13.19□□□□□ -0.37e-6■■■■□ 24.4
SNHG17-204ENST00000423536 RNF17Q9BXT8 1623 aaKnown RBP13.19□□□□□ -0.3
SNHG17-204ENST00000423536 ZNF772Q68DY9 489 aaPredicted RBP13.18□□□□□ -0.3
SNHG17-204ENST00000423536 RBM33Q96EV2 1170 aaKnown RBP13.17□□□□□ -0.3
SNHG17-204ENST00000423536 KCNA6P17658 529 aa13.16□□□□□ -0.3
SNHG17-204ENST00000423536 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
SNHG17-204ENST00000423536 MBD5Q9P267 1494 aa13.16□□□□□ -0.3
SNHG17-204ENST00000423536 RXRBP28702 533 aa13.15□□□□□ -0.3
SNHG17-204ENST00000423536 SLC26A8Q96RN1 970 aa13.14□□□□□ -0.31
SNHG17-204ENST00000423536 TMEM94Q12767 1356 aa13.14□□□□□ -0.31
SNHG17-204ENST00000423536 SYNMO15061 1565 aa13.14□□□□□ -0.31
SNHG17-204ENST00000423536 STRCP1A6NGW2 1772 aa13.14□□□□□ -0.31
SNHG17-204ENST00000423536 SCAF11Q99590 1463 aaKnown RBP13.13□□□□□ -0.31
SNHG17-204ENST00000423536 JCADQ9P266 1359 aa13.12□□□□□ -0.31
SNHG17-204ENST00000423536 C14orf37Q86TY3 774 aa13.12□□□□□ -0.31
SNHG17-204ENST00000423536 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.12□□□□□ -0.312e-6■□□□□ 8.3
SNHG17-204ENST00000423536 CCDC141Q6ZP82 1450 aa13.11□□□□□ -0.31
SNHG17-204ENST00000423536 MSH6P52701 1360 aa13.11□□□□□ -0.31
SNHG17-204ENST00000423536 FOXD1Q16676 465 aa13.11□□□□□ -0.31
SNHG17-204ENST00000423536 NUTM2BA6NNL0 878 aaPredicted RBP13.09□□□□□ -0.31
SNHG17-204ENST00000423536 NUTM2EB1AL46 878 aaPredicted RBP13.09□□□□□ -0.31
SNHG17-204ENST00000423536 NUTM2AQ8IVF1 878 aaPredicted RBP13.09□□□□□ -0.31
SNHG17-204ENST00000423536 CFAP65Q6ZU64 1925 aaKnown RBP13.09□□□□□ -0.31
SNHG17-204ENST00000423536 HDGFP51858 240 aaKnown RBP13.08□□□□□ -0.32
SNHG17-204ENST00000423536 SPATA31A6Q5VVP1 1343 aa13.08□□□□□ -0.32
SNHG17-204ENST00000423536 ERVK-7P63135 1459 aa13.07□□□□□ -0.32
SNHG17-204ENST00000423536 ROBO1Q9Y6N7 1651 aa13.05□□□□□ -0.32
SNHG17-204ENST00000423536 LRRC9Q6ZRR7 1453 aa13.05□□□□□ -0.32
SNHG17-204ENST00000423536 ATF3P18847 181 aa13.05□□□□□ -0.32
SNHG17-204ENST00000423536 NUTM2DQ5VT03 806 aaPredicted RBP13.05□□□□□ -0.32
SNHG17-204ENST00000423536 TIAM1Q13009 1591 aa13.05□□□□□ -0.32
SNHG17-204ENST00000423536 TMEM2Q9UHN6 1383 aa13.05□□□□□ -0.32
SNHG17-204ENST00000423536 SETD1AO15047 1707 aaKnown RBP13.05□□□□□ -0.32
SNHG17-204ENST00000423536 CEP162Q5TB80 1403 aa13.05□□□□□ -0.32
SNHG17-204ENST00000423536 CAMSAP2Q08AD1 1489 aa13.04□□□□□ -0.32
SNHG17-204ENST00000423536 PPP1R15AO75807 674 aaPredicted RBP13.04□□□□□ -0.32
SNHG17-204ENST00000423536 IDI1Q13907 227 aa13.04□□□□□ -0.32
SNHG17-204ENST00000423536 ABCC3O15438 1527 aa13.03□□□□□ -0.32
SNHG17-204ENST00000423536 ZC3H13Q5T200 1668 aaKnown RBP13.03□□□□□ -0.32
SNHG17-204ENST00000423536 KANK1Q14678 1352 aa13.03□□□□□ -0.32
SNHG17-204ENST00000423536 NCOA2Q15596 1464 aa13.03□□□□□ -0.32
SNHG17-204ENST00000423536 PHLPP1O60346 1717 aa13.02□□□□□ -0.32
SNHG17-204ENST00000423536 UBR1Q8IWV7 1749 aa13.02□□□□□ -0.32
SNHG17-204ENST00000423536 QTRT2Q9H974 415 aaKnown RBP13.02□□□□□ -0.33
SNHG17-204ENST00000423536 RRP7BPQ9NSQ0 103 aa13.02□□□□□ -0.33
SNHG17-204ENST00000423536 SLIT1O75093 1534 aa13.02□□□□□ -0.33
SNHG17-204ENST00000423536 EHBP1L1Q8N3D4 1523 aa13.02□□□□□ -0.33
SNHG17-204ENST00000423536 XIRP1Q702N8 1843 aaKnown RBP13.02□□□□□ -0.33
SNHG17-204ENST00000423536 CADPS2Q86UW7 1296 aa13.01□□□□□ -0.33
SNHG17-204ENST00000423536 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
SNHG17-204ENST00000423536 ARHGAP23Q9P227 1491 aa13.01□□□□□ -0.33
SNHG17-204ENST00000423536 C19orf44Q9H6X5 657 aa12.99□□□□□ -0.33
SNHG17-204ENST00000423536 AFF2P51816 1311 aa12.98□□□□□ -0.33
SNHG17-204ENST00000423536 PRDM15P57071 1507 aaPredicted RBP12.98□□□□□ -0.33
SNHG17-204ENST00000423536 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
SNHG17-204ENST00000423536 RBM6P78332 1123 aaKnown RBP12.97□□□□□ -0.33
SNHG17-204ENST00000423536 NGLY1Q96IV0 654 aa12.97□□□□□ -0.33
SNHG17-204ENST00000423536 C8orf37Q96NL8 207 aa12.97□□□□□ -0.33
SNHG17-204ENST00000423536 SLC52A1Q9NWF4 448 aa12.97□□□□□ -0.33
SNHG17-204ENST00000423536 ARHGAP31Q2M1Z3 1444 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms