RNA–Protein interactions for RNA: ENST00000420515.1

FAAP20-207, Transcript of FA core complex associated protein 20, humanhuman

TSL 1 (best)

Gene FAAP20, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAAP20-207ENST00000420515 DEPDC5O75140 1603 aa40.95■■■■■ 4.15
FAAP20-207ENST00000420515 GGT6Q6P531 493 aa40.92■■■■■ 4.14
FAAP20-207ENST00000420515 TRIM26Q12899 539 aaPredicted RBP40.9■■■■■ 4.14
FAAP20-207ENST00000420515 KDM4FA0A1W2PPD8 638 aa40.89■■■■■ 4.14
FAAP20-207ENST00000420515 RIMS1Q86UR5 1692 aaKnown RBP40.88■■■■■ 4.13
FAAP20-207ENST00000420515 PRDM15P57071 1507 aaPredicted RBP40.86■■■■■ 4.13
FAAP20-207ENST00000420515 CLTCQ00610 1675 aaKnown RBP40.85■■■■■ 4.13
FAAP20-207ENST00000420515 UNC13BO14795 1591 aa40.85■■■■■ 4.13
FAAP20-207ENST00000420515 CEP152O94986 1710 aa40.83■■■■■ 4.13
FAAP20-207ENST00000420515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP40.76■■■■■ 4.12
FAAP20-207ENST00000420515 SETD5Q9C0A6 1442 aa40.75■■■■■ 4.11
FAAP20-207ENST00000420515 KDM5DQ9BY66 1539 aa40.75■■■■■ 4.11
FAAP20-207ENST00000420515 VWDEQ8N2E2 1590 aa40.75■■■■■ 4.11
FAAP20-207ENST00000420515 ZC3H13Q5T200 1668 aaKnown RBP40.74■■■■■ 4.11
FAAP20-207ENST00000420515 ABCC3O15438 1527 aa40.73■■■■■ 4.11
FAAP20-207ENST00000420515 MROH2AA6NES4 1674 aa40.7■■■■■ 4.11
FAAP20-207ENST00000420515 C3P01024 1663 aa40.69■■■■■ 4.1
FAAP20-207ENST00000420515 RAB3GAP2Q9H2M9 1393 aa40.68■■■■■ 4.1
FAAP20-207ENST00000420515 FAM135AQ9P2D6 1515 aa40.68■■■■■ 4.1
FAAP20-207ENST00000420515 IQGAP3Q86VI3 1631 aa40.67■■■■■ 4.1
FAAP20-207ENST00000420515 CAMSAP1Q5T5Y3 1602 aa40.66■■■■■ 4.1
FAAP20-207ENST00000420515 WASHC2CQ9Y4E1 1318 aa40.65■■■■■ 4.1
FAAP20-207ENST00000420515 PTPRMP28827 1452 aa40.65■■■■■ 4.1
FAAP20-207ENST00000420515 PPP6R1Q9UPN7 881 aa40.64■■■■■ 4.1
FAAP20-207ENST00000420515 CNTLNQ9NXG0 1405 aa40.63■■■■■ 4.09
FAAP20-207ENST00000420515 ESF1Q9H501 851 aaKnown RBP40.62■■■■■ 4.09
FAAP20-207ENST00000420515 KANK1Q14678 1352 aa40.6■■■■■ 4.09
FAAP20-207ENST00000420515 NUP155O75694 1391 aa40.59■■■■■ 4.09
FAAP20-207ENST00000420515 LMTK2Q8IWU2 1503 aa40.59■■■■■ 4.09
FAAP20-207ENST00000420515 CEBPAP49715 358 aaPredicted RBP40.57■■■■■ 4.08
FAAP20-207ENST00000420515 PLPPR3Q6T4P5 718 aa40.57■■■■■ 4.08
FAAP20-207ENST00000420515 TET3O43151 1660 aa40.56■■■■■ 4.08
FAAP20-207ENST00000420515 ZMYM3Q14202 1370 aa40.56■■■■■ 4.08
FAAP20-207ENST00000420515 CFAP65Q6ZU64 1925 aaKnown RBP40.55■■■■■ 4.08
FAAP20-207ENST00000420515 EFCAB6Q5THR3 1501 aa40.53■■■■■ 4.08
FAAP20-207ENST00000420515 PCGF6Q9BYE7 350 aa40.52■■■■■ 4.08
FAAP20-207ENST00000420515 TRIM52Q96A61 297 aa40.52■■■■■ 4.08
FAAP20-207ENST00000420515 PZPP20742 1482 aa40.51■■■■■ 4.08
FAAP20-207ENST00000420515 E9PCH4 1651 aa40.5■■■■■ 4.07
FAAP20-207ENST00000420515 NPATQ14207 1427 aa40.46■■■■■ 4.07
FAAP20-207ENST00000420515 PREX1Q8TCU6 1659 aa40.43■■■■■ 4.06
FAAP20-207ENST00000420515 ARHGAP31Q2M1Z3 1444 aa40.41■■■■■ 4.06
FAAP20-207ENST00000420515 FBXO31Q5XUX0 539 aaPredicted RBP40.4■■■■■ 4.06
FAAP20-207ENST00000420515 HRCP23327 699 aa40.37■■■■■ 4.05
FAAP20-207ENST00000420515 ERVK-7P63135 1459 aa40.35■■■■■ 4.05
FAAP20-207ENST00000420515 SPATA31D1Q6ZQQ2 1576 aa40.34■■■■■ 4.05
FAAP20-207ENST00000420515 SLC4A1APQ9BWU0 796 aaKnown RBP40.32■■■■■ 4.04
FAAP20-207ENST00000420515 RPRD2Q5VT52 1461 aaKnown RBP40.31■■■■■ 4.04
FAAP20-207ENST00000420515 MPHOSPH9Q99550 1183 aa40.29■■■■■ 4.04
FAAP20-207ENST00000420515 SYNMO15061 1565 aa40.28■■■■■ 4.04
FAAP20-207ENST00000420515 SPHKAPQ2M3C7 1700 aa40.27■■■■■ 4.04
FAAP20-207ENST00000420515 PKD2Q13563 968 aa40.26■■■■■ 4.04
FAAP20-207ENST00000420515 MYO3AQ8NEV4 1616 aa40.26■■■■■ 4.04
FAAP20-207ENST00000420515 SETD1BQ9UPS6 1966 aaKnown RBP40.25■■■■■ 4.03
FAAP20-207ENST00000420515 FOXD1Q16676 465 aa40.24■■■■■ 4.03
FAAP20-207ENST00000420515 NOS1P29475 1434 aa40.24■■■■■ 4.03
FAAP20-207ENST00000420515 ACIN1Q9UKV3 1341 aaKnown RBP40.23■■■■■ 4.03
FAAP20-207ENST00000420515 TNRQ92752 1358 aa40.21■■■■■ 4.03
FAAP20-207ENST00000420515 UGGT1Q9NYU2 1555 aa40.18■■■■■ 4.02
FAAP20-207ENST00000420515 PLA2R1Q13018 1463 aa40.14■■■■■ 4.02
FAAP20-207ENST00000420515 PTPRTO14522 1441 aa40.13■■■■■ 4.02
FAAP20-207ENST00000420515 AEBP2Q6ZN18 517 aaPredicted RBP40.13■■■■■ 4.01
FAAP20-207ENST00000420515 PIK3C2BO00750 1634 aa40.13■■■■■ 4.01
FAAP20-207ENST00000420515 ZNF142P52746 1687 aaPredicted RBP40.13■■■■■ 4.01
FAAP20-207ENST00000420515 TRPM2O94759 1503 aa40.1■■■■■ 4.01
FAAP20-207ENST00000420515 CEP170BQ9Y4F5 1589 aaPredicted RBP40.09■■■■■ 4.01
FAAP20-207ENST00000420515 CLTCL1P53675 1640 aa40.08■■■■■ 4.01
FAAP20-207ENST00000420515 UHRF1BP1Q6BDS2 1440 aa40.08■■■■■ 4.01
FAAP20-207ENST00000420515 LMTK3Q96Q04 1460 aa40.08■■■■■ 4.01
FAAP20-207ENST00000420515 NLRP1Q9C000 1473 aa40.04■■■■■ 4
FAAP20-207ENST00000420515 DHX57Q6P158 1386 aaKnown RBP40.03■■■■■ 4
FAAP20-207ENST00000420515 MYO5BQ9ULV0 1848 aa40.03■■■■■ 4
FAAP20-207ENST00000420515 UBR1Q8IWV7 1749 aa40.02■■■■■ 4
FAAP20-207ENST00000420515 A2ML1A8K2U0 1454 aa40.02■■■■■ 4
FAAP20-207ENST00000420515 IDI1Q13907 227 aa40.01■■■■□ 3.99
FAAP20-207ENST00000420515 ADGRB3O60242 1522 aa39.93■■■■□ 3.98
FAAP20-207ENST00000420515 ANKRD30BQ9BXX2 1392 aa39.93■■■■□ 3.98
FAAP20-207ENST00000420515 SLC52A1Q9NWF4 448 aa39.93■■■■□ 3.98
FAAP20-207ENST00000420515 TMEM131LA2VDJ0 1609 aa39.93■■■■□ 3.98
FAAP20-207ENST00000420515 KIF1BO60333 1816 aa39.92■■■■□ 3.98
FAAP20-207ENST00000420515 KDM5AP29375 1690 aaKnown RBP39.91■■■■□ 3.98
FAAP20-207ENST00000420515 HSPA2P54652 639 aa39.9■■■■□ 3.98
FAAP20-207ENST00000420515 CCDC144AA2RUR9 1427 aa39.86■■■■□ 3.97
FAAP20-207ENST00000420515 CHGAP10645 457 aaKnown RBP39.81■■■■□ 3.96
FAAP20-207ENST00000420515 STAG3Q9UJ98 1225 aa39.78■■■■□ 3.96
FAAP20-207ENST00000420515 STRCQ7RTU9 1775 aa39.75■■■■□ 3.95
FAAP20-207ENST00000420515 THEMISQ8N1K5 641 aaPredicted RBP39.72■■■■□ 3.95
FAAP20-207ENST00000420515 SLIT1O75093 1534 aa39.72■■■■□ 3.95
FAAP20-207ENST00000420515 POLR1AO95602 1720 aaPredicted RBP39.72■■■■□ 3.95
FAAP20-207ENST00000420515 ARHGAP23Q9P227 1491 aa39.71■■■■□ 3.95
FAAP20-207ENST00000420515 SPATA31E1Q6ZUB1 1445 aa39.71■■■■□ 3.95
FAAP20-207ENST00000420515 TMEM2Q9UHN6 1383 aa39.68■■■■□ 3.94
FAAP20-207ENST00000420515 SIN3AQ96ST3 1273 aa39.67■■■■□ 3.94
FAAP20-207ENST00000420515 ZFYVE9O95405 1425 aa39.65■■■■□ 3.94
FAAP20-207ENST00000420515 NEURL4Q96JN8 1562 aa39.64■■■■□ 3.94
FAAP20-207ENST00000420515 NEXMIFQ5QGS0 1516 aa39.64■■■■□ 3.94
FAAP20-207ENST00000420515 IFT172Q9UG01 1749 aa39.64■■■■□ 3.94
FAAP20-207ENST00000420515 PPLO60437 1756 aa39.63■■■■□ 3.93
FAAP20-207ENST00000420515 RIMS2Q9UQ26 1411 aa39.62■■■■□ 3.93
FAAP20-207ENST00000420515 NCKAP5LQ9HCH0 1330 aa39.61■■■■□ 3.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms