RNA–Protein interactions for RNA: ENST00000420453.1

LINC00993-201, long intergenic non-protein coding RNA 993, humanhuman

BASIC

Gene LINC00993, Length 540 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00993-201ENST00000420453 ZCCHC6Q5VYS8 1495 aaKnown RBP9.49□□□□□ -0.89
LINC00993-201ENST00000420453 DPYSL4O14531 572 aa9.49□□□□□ -0.89
LINC00993-201ENST00000420453 PHF14O94880 888 aa9.49□□□□□ -0.89
LINC00993-201ENST00000420453 TYW1BQ6NUM6 668 aa9.49□□□□□ -0.89
LINC00993-201ENST00000420453 BCANQ96GW7 911 aa9.49□□□□□ -0.89
LINC00993-201ENST00000420453 ZBED2Q9BTP6 218 aa9.49□□□□□ -0.89
LINC00993-201ENST00000420453 PCDHGA10Q9Y5H3 936 aa9.49□□□□□ -0.89
LINC00993-201ENST00000420453 GOLGA8CPA6NN73 597 aa9.48□□□□□ -0.89
LINC00993-201ENST00000420453 MRPL50Q8N5N7 158 aaKnown RBP9.47□□□□□ -0.89
LINC00993-201ENST00000420453 PRKCSHP14314 528 aaPredicted RBP9.46□□□□□ -0.9
LINC00993-201ENST00000420453 EPAS1Q99814 870 aa9.46□□□□□ -0.9
LINC00993-201ENST00000420453 NBPF3Q9H094 633 aa9.46□□□□□ -0.9
LINC00993-201ENST00000420453 WDR70Q9NW82 654 aa9.46□□□□□ -0.9
LINC00993-201ENST00000420453 PPP1R3GB7ZBB8 358 aa9.45□□□□□ -0.9
LINC00993-201ENST00000420453 PLA2G2EQ9NZK7 142 aa9.45□□□□□ -0.9
LINC00993-201ENST00000420453 BHMG1C9JSJ3 638 aaPredicted RBP9.44□□□□□ -0.9
LINC00993-201ENST00000420453 DCAF1Q9Y4B6 1507 aa9.41□□□□□ -0.9
LINC00993-201ENST00000420453 PTPN5P54829 565 aa9.41□□□□□ -0.9
LINC00993-201ENST00000420453 E2F4Q16254 413 aa9.41□□□□□ -0.9
LINC00993-201ENST00000420453 DDX12PQ92771 950 aa9.41□□□□□ -0.9
LINC00993-201ENST00000420453 WNT2BQ93097 391 aa9.41□□□□□ -0.9
LINC00993-201ENST00000420453 SPDYE16A6NNV3 312 aaPredicted RBP9.4□□□□□ -0.9
LINC00993-201ENST00000420453 C6orf132Q5T0Z8 1188 aa9.4□□□□□ -0.9
LINC00993-201ENST00000420453 KCNV2Q8TDN2 545 aa9.4□□□□□ -0.9
LINC00993-201ENST00000420453 RABGEF1Q9UJ41 708 aa9.4□□□□□ -0.9
LINC00993-201ENST00000420453 MYO15BQ96JP2 1530 aa9.4□□□□□ -0.91
LINC00993-201ENST00000420453 COL9A1P20849 921 aa9.39□□□□□ -0.91
LINC00993-201ENST00000420453 RBM33Q96EV2 1170 aaKnown RBP9.39□□□□□ -0.91
LINC00993-201ENST00000420453 PDIA6Q15084 440 aa9.38□□□□□ -0.91
LINC00993-201ENST00000420453 PROX2Q3B8N5 592 aa9.38□□□□□ -0.91
LINC00993-201ENST00000420453 THSD4Q6ZMP0 1018 aa9.38□□□□□ -0.91
LINC00993-201ENST00000420453 ONECUT3O60422 494 aaPredicted RBP9.36□□□□□ -0.91
LINC00993-201ENST00000420453 NBR1Q14596 966 aa9.36□□□□□ -0.91
LINC00993-201ENST00000420453 MAP3K7O43318 606 aa9.35□□□□□ -0.91
LINC00993-201ENST00000420453 ANKK1Q8NFD2 765 aa9.35□□□□□ -0.91
LINC00993-201ENST00000420453 KIAA1468Q9P260 1216 aa9.35□□□□□ -0.91
LINC00993-201ENST00000420453 LAPTM4BQ86VI4 370 aa9.34□□□□□ -0.91
LINC00993-201ENST00000420453 EN1Q05925 392 aaPredicted RBP9.33□□□□□ -0.92
LINC00993-201ENST00000420453 NACADO15069 1562 aa9.33□□□□□ -0.92
LINC00993-201ENST00000420453 TRIM6-TRIM34B2RNG4 842 aa9.32□□□□□ -0.92
LINC00993-201ENST00000420453 ARIH1Q9Y4X5 557 aaPredicted RBP9.32□□□□□ -0.92
LINC00993-201ENST00000420453 TPRNQ4KMQ1 711 aa9.31□□□□□ -0.92
LINC00993-201ENST00000420453 GRXCR2A6NFK2 248 aa9.3□□□□□ -0.92
LINC00993-201ENST00000420453 PACS2Q86VP3 889 aa9.29□□□□□ -0.92
LINC00993-201ENST00000420453 ZFRQ96KR1 1074 aaKnown RBP9.29□□□□□ -0.92
LINC00993-201ENST00000420453 TSR1Q2NL82 804 aaKnown RBP9.28□□□□□ -0.92
LINC00993-201ENST00000420453 FAM98CQ17RN3 349 aaKnown RBP9.27□□□□□ -0.93
LINC00993-201ENST00000420453 CERKQ8TCT0 537 aa9.27□□□□□ -0.93
LINC00993-201ENST00000420453 SEPT9Q9UHD8 586 aaPredicted RBP9.27□□□□□ -0.93
LINC00993-201ENST00000420453 RB1CC1Q8TDY2 1594 aa9.26□□□□□ -0.93
LINC00993-201ENST00000420453 SOWAHBA6NEL2 793 aa9.26□□□□□ -0.93
LINC00993-201ENST00000420453 BCAMP50895 628 aa9.25□□□□□ -0.93
LINC00993-201ENST00000420453 IFFO2Q5TF58 517 aa9.24□□□□□ -0.93
LINC00993-201ENST00000420453 NYAP1Q6ZVC0 841 aa9.24□□□□□ -0.93
LINC00993-201ENST00000420453 P3H3Q8IVL6 736 aa9.24□□□□□ -0.93
LINC00993-201ENST00000420453 SEMA3EO15041 775 aa9.23□□□□□ -0.93
LINC00993-201ENST00000420453 PRSS12P56730 875 aa9.23□□□□□ -0.93
LINC00993-201ENST00000420453 ARHGEF1Q92888 912 aaKnown RBP9.23□□□□□ -0.93
LINC00993-201ENST00000420453 CDCA7LQ96GN5 454 aa9.23□□□□□ -0.93
LINC00993-201ENST00000420453 LRCH3Q96II8 777 aa9.23□□□□□ -0.93
LINC00993-201ENST00000420453 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.23□□□□□ -0.93
LINC00993-201ENST00000420453 TSKSQ9UJT2 592 aa9.23□□□□□ -0.93
LINC00993-201ENST00000420453 OSBPP22059 807 aa9.21□□□□□ -0.94
LINC00993-201ENST00000420453 TSR3Q9UJK0 312 aaKnown RBP9.2□□□□□ -0.94
LINC00993-201ENST00000420453 NBPF26B4DH59 902 aa9.19□□□□□ -0.94
LINC00993-201ENST00000420453 PRIM1P49642 420 aaKnown RBP9.19□□□□□ -0.94
LINC00993-201ENST00000420453 WBP1LQ9NX94 342 aa9.19□□□□□ -0.94
LINC00993-201ENST00000420453 HPS5Q9UPZ3 1129 aa9.18□□□□□ -0.94
LINC00993-201ENST00000420453 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.17□□□□□ -0.94
LINC00993-201ENST00000420453 PNMA3Q9UL41 463 aa9.17□□□□□ -0.94
LINC00993-201ENST00000420453 A0A0G2JS52 829 aa9.16□□□□□ -0.94
LINC00993-201ENST00000420453 SMAPO00193 183 aa9.16□□□□□ -0.94
LINC00993-201ENST00000420453 RGS20O76081 388 aa9.16□□□□□ -0.94
LINC00993-201ENST00000420453 HDGFP51858 240 aaKnown RBP9.16□□□□□ -0.94
LINC00993-201ENST00000420453 PPP4CP60510 307 aa9.16□□□□□ -0.94
LINC00993-201ENST00000420453 TATDN2Q93075 761 aa9.16□□□□□ -0.94
LINC00993-201ENST00000420453 CDHR5Q9HBB8 845 aa9.16□□□□□ -0.94
LINC00993-201ENST00000420453 RBM27Q9P2N5 1060 aaKnown RBP9.16□□□□□ -0.94
LINC00993-201ENST00000420453 ITGBL1O95965 494 aaPredicted RBP9.15□□□□□ -0.94
LINC00993-201ENST00000420453 TESPA1A2RU30 521 aaPredicted RBP9.14□□□□□ -0.95
LINC00993-201ENST00000420453 MLLT3P42568 568 aaPredicted RBP9.14□□□□□ -0.95
LINC00993-201ENST00000420453 FAM198AQ9UFP1 575 aa9.14□□□□□ -0.95
LINC00993-201ENST00000420453 KCNC4Q03721 635 aa9.13□□□□□ -0.95
LINC00993-201ENST00000420453 SAMD7Q7Z3H4 446 aa9.13□□□□□ -0.95
LINC00993-201ENST00000420453 NUDT18Q6ZVK8 323 aa9.12□□□□□ -0.95
LINC00993-201ENST00000420453 LMOD2Q6P5Q4 547 aa9.11□□□□□ -0.95
LINC00993-201ENST00000420453 PADI6Q6TGC4 694 aa9.1□□□□□ -0.95
LINC00993-201ENST00000420453 NPDC1Q9NQX5 325 aaPredicted RBP9.09□□□□□ -0.95
LINC00993-201ENST00000420453 C3orf80F5H4A9 247 aa9.08□□□□□ -0.96
LINC00993-201ENST00000420453 RNF40O75150 1001 aa9.08□□□□□ -0.96
LINC00993-201ENST00000420453 SLC4A3P48751 1232 aa9.08□□□□□ -0.96
LINC00993-201ENST00000420453 TTC13Q8NBP0 860 aa9.07□□□□□ -0.96
LINC00993-201ENST00000420453 NECTIN2Q92692 538 aa9.07□□□□□ -0.96
LINC00993-201ENST00000420453 RBM26Q5T8P6 1007 aaKnown RBP9.06□□□□□ -0.96
LINC00993-201ENST00000420453 SCRIBQ14160 1630 aa9.05□□□□□ -0.96
LINC00993-201ENST00000420453 NUTM2FA1L443 756 aa9.04□□□□□ -0.96
LINC00993-201ENST00000420453 SLF2Q8IX21 1173 aa9.04□□□□□ -0.96
LINC00993-201ENST00000420453 IRX2Q9BZI1 471 aaPredicted RBP9.03□□□□□ -0.96
LINC00993-201ENST00000420453 PTGDRQ13258 359 aa9.02□□□□□ -0.97
LINC00993-201ENST00000420453 SWT1Q5T5J6 900 aaKnown RBP9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms