RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 CNTLNQ9NXG0 1405 aa30.58■■■□□ 2.49
EGFR-204ENST00000420316 FER1L4A9Z1Z3 1794 aa30.57■■■□□ 2.49
EGFR-204ENST00000420316 NAIPQ13075 1403 aa30.56■■■□□ 2.48
EGFR-204ENST00000420316 RIMS1Q86UR5 1692 aaKnown RBP30.56■■■□□ 2.48
EGFR-204ENST00000420316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.55■■■□□ 2.48
EGFR-204ENST00000420316 GCC2Q8IWJ2 1684 aa30.55■■■□□ 2.48
EGFR-204ENST00000420316 PLPPR3Q6T4P5 718 aa30.54■■■□□ 2.48
EGFR-204ENST00000420316 MROH1Q8NDA8 1641 aa30.53■■■□□ 2.48
EGFR-204ENST00000420316 RNF17Q9BXT8 1623 aaKnown RBP30.53■■■□□ 2.48
EGFR-204ENST00000420316 FAM135AQ9P2D6 1515 aa30.51■■■□□ 2.47
EGFR-204ENST00000420316 HFM1A2PYH4 1435 aa30.51■■■□□ 2.47
EGFR-204ENST00000420316 WASHC2CQ9Y4E1 1318 aa30.5■■■□□ 2.47
EGFR-204ENST00000420316 CLTCQ00610 1675 aaKnown RBP30.5■■■□□ 2.47
EGFR-204ENST00000420316 ZMYM3Q14202 1370 aa30.48■■■□□ 2.47
EGFR-204ENST00000420316 DEPDC5O75140 1603 aa30.46■■■□□ 2.47
EGFR-204ENST00000420316 CEBPAP49715 358 aaPredicted RBP30.46■■■□□ 2.47
EGFR-204ENST00000420316 TRIM26Q12899 539 aaPredicted RBP30.45■■■□□ 2.47
EGFR-204ENST00000420316 KDM5DQ9BY66 1539 aa30.45■■■□□ 2.47
EGFR-204ENST00000420316 CEP152O94986 1710 aa30.45■■■□□ 2.47
EGFR-204ENST00000420316 PRDM15P57071 1507 aaPredicted RBP30.43■■■□□ 2.46
EGFR-204ENST00000420316 MROH2AA6NES4 1674 aa30.43■■■□□ 2.46
EGFR-204ENST00000420316 KANK1Q14678 1352 aa30.42■■■□□ 2.46
EGFR-204ENST00000420316 UNC13BO14795 1591 aa30.39■■■□□ 2.46
EGFR-204ENST00000420316 ABCC3O15438 1527 aa30.38■■■□□ 2.45
EGFR-204ENST00000420316 SETD5Q9C0A6 1442 aa30.38■■■□□ 2.45
EGFR-204ENST00000420316 C3P01024 1663 aa30.37■■■□□ 2.45
EGFR-204ENST00000420316 ZC3H13Q5T200 1668 aaKnown RBP30.35■■■□□ 2.45
EGFR-204ENST00000420316 VWDEQ8N2E2 1590 aa30.34■■■□□ 2.45
EGFR-204ENST00000420316 TRIM52Q96A61 297 aa30.33■■■□□ 2.45
EGFR-204ENST00000420316 NUP155O75694 1391 aa30.33■■■□□ 2.45
EGFR-204ENST00000420316 NPATQ14207 1427 aa30.32■■■□□ 2.44
EGFR-204ENST00000420316 RAB3GAP2Q9H2M9 1393 aa30.32■■■□□ 2.44
EGFR-204ENST00000420316 CAMSAP1Q5T5Y3 1602 aa30.31■■■□□ 2.44
EGFR-204ENST00000420316 LMTK2Q8IWU2 1503 aa30.31■■■□□ 2.44
EGFR-204ENST00000420316 PZPP20742 1482 aa30.31■■■□□ 2.44
EGFR-204ENST00000420316 CFAP65Q6ZU64 1925 aaKnown RBP30.29■■■□□ 2.44
EGFR-204ENST00000420316 ARHGAP31Q2M1Z3 1444 aa30.28■■■□□ 2.44
EGFR-204ENST00000420316 IQGAP3Q86VI3 1631 aa30.27■■■□□ 2.44
EGFR-204ENST00000420316 FBXO31Q5XUX0 539 aaPredicted RBP30.27■■■□□ 2.44
EGFR-204ENST00000420316 SETD1BQ9UPS6 1966 aaKnown RBP30.26■■■□□ 2.43
EGFR-204ENST00000420316 PCGF6Q9BYE7 350 aa30.22■■■□□ 2.43
EGFR-204ENST00000420316 TET3O43151 1660 aa30.21■■■□□ 2.43
EGFR-204ENST00000420316 ACIN1Q9UKV3 1341 aaKnown RBP30.2■■■□□ 2.43
EGFR-204ENST00000420316 EFCAB6Q5THR3 1501 aa30.2■■■□□ 2.42
EGFR-204ENST00000420316 TNRQ92752 1358 aa30.18■■■□□ 2.42
EGFR-204ENST00000420316 UHRF1BP1Q6BDS2 1440 aa30.17■■■□□ 2.42
EGFR-204ENST00000420316 E9PCH4 1651 aa30.17■■■□□ 2.42
EGFR-204ENST00000420316 LMTK3Q96Q04 1460 aa30.16■■■□□ 2.42
EGFR-204ENST00000420316 ERVK-7P63135 1459 aa30.15■■■□□ 2.42
EGFR-204ENST00000420316 RPRD2Q5VT52 1461 aaKnown RBP30.15■■■□□ 2.42
EGFR-204ENST00000420316 SPATA31D1Q6ZQQ2 1576 aa30.15■■■□□ 2.42
EGFR-204ENST00000420316 PREX1Q8TCU6 1659 aa30.14■■■□□ 2.42
EGFR-204ENST00000420316 SLC4A1APQ9BWU0 796 aaKnown RBP30.13■■■□□ 2.41
EGFR-204ENST00000420316 HRCP23327 699 aa30.11■■■□□ 2.41
EGFR-204ENST00000420316 PKD2Q13563 968 aa30.1■■■□□ 2.41
EGFR-204ENST00000420316 FOXD1Q16676 465 aa30.1■■■□□ 2.41
EGFR-204ENST00000420316 MPHOSPH9Q99550 1183 aa30.09■■■□□ 2.41
EGFR-204ENST00000420316 NOS1P29475 1434 aa30.08■■■□□ 2.41
EGFR-204ENST00000420316 NLRP1Q9C000 1473 aa30.07■■■□□ 2.4
EGFR-204ENST00000420316 MYO3AQ8NEV4 1616 aa30.05■■■□□ 2.4
EGFR-204ENST00000420316 HSPA2P54652 639 aa30.04■■■□□ 2.4
EGFR-204ENST00000420316 SYNMO15061 1565 aa30.03■■■□□ 2.4
EGFR-204ENST00000420316 A2ML1A8K2U0 1454 aa30.03■■■□□ 2.4
EGFR-204ENST00000420316 SLC52A1Q9NWF4 448 aa30.01■■■□□ 2.39
EGFR-204ENST00000420316 CEP170BQ9Y4F5 1589 aaPredicted RBP30.01■■■□□ 2.39
EGFR-204ENST00000420316 UGGT1Q9NYU2 1555 aa29.99■■■□□ 2.39
EGFR-204ENST00000420316 ZNF142P52746 1687 aaPredicted RBP29.98■■■□□ 2.39
EGFR-204ENST00000420316 SPHKAPQ2M3C7 1700 aa29.98■■■□□ 2.39
EGFR-204ENST00000420316 IDI1Q13907 227 aa29.98■■■□□ 2.39
EGFR-204ENST00000420316 THEMISQ8N1K5 641 aaPredicted RBP29.95■■■□□ 2.39
EGFR-204ENST00000420316 PTPRTO14522 1441 aa29.94■■■□□ 2.38
EGFR-204ENST00000420316 PLA2R1Q13018 1463 aa29.92■■■□□ 2.38
EGFR-204ENST00000420316 PIK3C2BO00750 1634 aa29.92■■■□□ 2.38
EGFR-204ENST00000420316 CLTCL1P53675 1640 aa29.87■■■□□ 2.37
EGFR-204ENST00000420316 STAG3Q9UJ98 1225 aa29.87■■■□□ 2.37
EGFR-204ENST00000420316 TRPM2O94759 1503 aa29.86■■■□□ 2.37
EGFR-204ENST00000420316 CHGAP10645 457 aaKnown RBP29.86■■■□□ 2.37
EGFR-204ENST00000420316 UBR1Q8IWV7 1749 aa29.84■■■□□ 2.37
EGFR-204ENST00000420316 MYO5BQ9ULV0 1848 aa29.84■■■□□ 2.37
EGFR-204ENST00000420316 DHX57Q6P158 1386 aaKnown RBP29.81■■■□□ 2.36
EGFR-204ENST00000420316 KDM5AP29375 1690 aaKnown RBP29.81■■■□□ 2.36
EGFR-204ENST00000420316 ANKLE2Q86XL3 938 aa29.8■■■□□ 2.36
EGFR-204ENST00000420316 DMRT2Q9Y5R5 561 aa29.79■■■□□ 2.36
EGFR-204ENST00000420316 ADGRB3O60242 1522 aa29.78■■■□□ 2.36
EGFR-204ENST00000420316 NCKAP5LQ9HCH0 1330 aa29.77■■■□□ 2.36
EGFR-204ENST00000420316 TMEM131LA2VDJ0 1609 aa29.76■■■□□ 2.36
EGFR-204ENST00000420316 STRCQ7RTU9 1775 aa29.76■■■□□ 2.35
EGFR-204ENST00000420316 ANKRD30BQ9BXX2 1392 aa29.76■■■□□ 2.35
EGFR-204ENST00000420316 TMEM2Q9UHN6 1383 aa29.76■■■□□ 2.35
EGFR-204ENST00000420316 ARHGAP23Q9P227 1491 aa29.75■■■□□ 2.35
EGFR-204ENST00000420316 SLIT1O75093 1534 aa29.75■■■□□ 2.35
EGFR-204ENST00000420316 CCDC144AA2RUR9 1427 aa29.74■■■□□ 2.35
EGFR-204ENST00000420316 KIF1BO60333 1816 aa29.74■■■□□ 2.35
EGFR-204ENST00000420316 EID1Q9Y6B2 187 aa29.72■■■□□ 2.35
EGFR-204ENST00000420316 TXNDC2Q86VQ3 553 aa29.71■■■□□ 2.35
EGFR-204ENST00000420316 LTKP29376 864 aa29.69■■■□□ 2.34
EGFR-204ENST00000420316 HDGFP51858 240 aaKnown RBP29.69■■■□□ 2.34
EGFR-204ENST00000420316 NUTM2DQ5VT03 806 aaPredicted RBP29.69■■■□□ 2.34
EGFR-204ENST00000420316 SENP3Q9H4L4 574 aaPredicted RBP29.69■■■□□ 2.34
EGFR-204ENST00000420316 ZNF326Q5BKZ1 582 aaKnown RBP29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms