RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.65■■■□□ 2.022e-7■■■□□ 16.2
SEMA3B-202ENST00000418576 SETD5Q9C0A6 1442 aa27.65■■■□□ 2.02
SEMA3B-202ENST00000418576 WASHC2CQ9Y4E1 1318 aa27.63■■■□□ 2.01
SEMA3B-202ENST00000418576 KANK1Q14678 1352 aa27.63■■■□□ 2.01
SEMA3B-202ENST00000418576 ADAMTSL3P82987 1691 aa27.63■■■□□ 2.01
SEMA3B-202ENST00000418576 KDM4FA0A1W2PPD8 638 aa27.61■■■□□ 2.01
SEMA3B-202ENST00000418576 DEPDC5O75140 1603 aa27.6■■■□□ 2.01
SEMA3B-202ENST00000418576 CNTLNQ9NXG0 1405 aa27.6■■■□□ 2.01
SEMA3B-202ENST00000418576 PRDM15P57071 1507 aaPredicted RBP27.6■■■□□ 2.01
SEMA3B-202ENST00000418576 ACIN1Q9UKV3 1341 aaKnown RBP27.59■■■□□ 2.01
SEMA3B-202ENST00000418576 FAM135AQ9P2D6 1515 aa27.59■■■□□ 2.01
SEMA3B-202ENST00000418576 MADDQ8WXG6 1647 aa27.58■■■□□ 2.01
SEMA3B-202ENST00000418576 FER1L4A9Z1Z3 1794 aa27.57■■■□□ 2
SEMA3B-202ENST00000418576 MROH1Q8NDA8 1641 aa27.57■■■□□ 2
SEMA3B-202ENST00000418576 KDM5DQ9BY66 1539 aa27.57■■■□□ 2
SEMA3B-202ENST00000418576 NUP155O75694 1391 aa27.56■■■□□ 2
SEMA3B-202ENST00000418576 UNC13BO14795 1591 aa27.55■■■□□ 2
SEMA3B-202ENST00000418576 RAB3GAP2Q9H2M9 1393 aa27.55■■■□□ 2
SEMA3B-202ENST00000418576 TRIM52Q96A61 297 aa27.55■■■□□ 2
SEMA3B-202ENST00000418576 RIMS1Q86UR5 1692 aaKnown RBP27.51■■■□□ 2
SEMA3B-202ENST00000418576 ABCC3O15438 1527 aa27.51■■□□□ 1.99
SEMA3B-202ENST00000418576 HRCP23327 699 aa27.51■■□□□ 1.99
SEMA3B-202ENST00000418576 CLTCQ00610 1675 aaKnown RBP27.51■■□□□ 1.99
SEMA3B-202ENST00000418576 ZC3H13Q5T200 1668 aaKnown RBP27.51■■□□□ 1.99
SEMA3B-202ENST00000418576 PCGF6Q9BYE7 350 aa27.5■■□□□ 1.99
SEMA3B-202ENST00000418576 ZMYM3Q14202 1370 aa27.5■■□□□ 1.99
SEMA3B-202ENST00000418576 VWDEQ8N2E2 1590 aa27.5■■□□□ 1.99
SEMA3B-202ENST00000418576 PTPRMP28827 1452 aa27.48■■□□□ 1.99
SEMA3B-202ENST00000418576 LMTK2Q8IWU2 1503 aa27.46■■□□□ 1.99
SEMA3B-202ENST00000418576 MROH2AA6NES4 1674 aa27.46■■□□□ 1.99
SEMA3B-202ENST00000418576 IQGAP3Q86VI3 1631 aa27.45■■□□□ 1.98
SEMA3B-202ENST00000418576 PLPPR3Q6T4P5 718 aa27.45■■□□□ 1.98
SEMA3B-202ENST00000418576 CEP152O94986 1710 aa27.44■■□□□ 1.98
SEMA3B-202ENST00000418576 CEBPAP49715 358 aaPredicted RBP27.43■■□□□ 1.98
SEMA3B-202ENST00000418576 CAMSAP1Q5T5Y3 1602 aa27.41■■□□□ 1.98
SEMA3B-202ENST00000418576 SLC4A1APQ9BWU0 796 aaKnown RBP27.4■■□□□ 1.98
SEMA3B-202ENST00000418576 ARHGAP31Q2M1Z3 1444 aa27.4■■□□□ 1.98
SEMA3B-202ENST00000418576 TET3O43151 1660 aa27.38■■□□□ 1.97
SEMA3B-202ENST00000418576 C3P01024 1663 aa27.38■■□□□ 1.97
SEMA3B-202ENST00000418576 PZPP20742 1482 aa27.38■■□□□ 1.97
SEMA3B-202ENST00000418576 EFCAB6Q5THR3 1501 aa27.37■■□□□ 1.97
SEMA3B-202ENST00000418576 NPATQ14207 1427 aa27.36■■□□□ 1.97
SEMA3B-202ENST00000418576 MPHOSPH9Q99550 1183 aa27.35■■□□□ 1.97
SEMA3B-202ENST00000418576 RPRD2Q5VT52 1461 aaKnown RBP27.35■■□□□ 1.97
SEMA3B-202ENST00000418576 FBXO31Q5XUX0 539 aaPredicted RBP27.33■■□□□ 1.97
SEMA3B-202ENST00000418576 PKD2Q13563 968 aa27.32■■□□□ 1.96
SEMA3B-202ENST00000418576 AEBP2Q6ZN18 517 aaPredicted RBP27.3■■□□□ 1.96
SEMA3B-202ENST00000418576 E9PCH4 1651 aa27.27■■□□□ 1.96
SEMA3B-202ENST00000418576 ERVK-7P63135 1459 aa27.27■■□□□ 1.96
SEMA3B-202ENST00000418576 TNRQ92752 1358 aa27.26■■□□□ 1.95
SEMA3B-202ENST00000418576 SPATA31D1Q6ZQQ2 1576 aa27.25■■□□□ 1.95
SEMA3B-202ENST00000418576 PREX1Q8TCU6 1659 aa27.23■■□□□ 1.95
SEMA3B-202ENST00000418576 CFAP65Q6ZU64 1925 aaKnown RBP27.23■■□□□ 1.95
SEMA3B-202ENST00000418576 SETD1BQ9UPS6 1966 aaKnown RBP27.22■■□□□ 1.95
SEMA3B-202ENST00000418576 NOS1P29475 1434 aa27.22■■□□□ 1.95
SEMA3B-202ENST00000418576 FOXD1Q16676 465 aa27.2■■□□□ 1.95
SEMA3B-202ENST00000418576 SLC52A1Q9NWF4 448 aa27.19■■□□□ 1.94
SEMA3B-202ENST00000418576 PTPRTO14522 1441 aa27.17■■□□□ 1.94
SEMA3B-202ENST00000418576 UHRF1BP1Q6BDS2 1440 aa27.17■■□□□ 1.94
SEMA3B-202ENST00000418576 NLRP1Q9C000 1473 aa27.16■■□□□ 1.94
SEMA3B-202ENST00000418576 SYNMO15061 1565 aa27.13■■□□□ 1.93
SEMA3B-202ENST00000418576 SPHKAPQ2M3C7 1700 aa27.13■■□□□ 1.93
SEMA3B-202ENST00000418576 IDI1Q13907 227 aa27.12■■□□□ 1.93
SEMA3B-202ENST00000418576 MYO3AQ8NEV4 1616 aa27.12■■□□□ 1.93
SEMA3B-202ENST00000418576 TRPM2O94759 1503 aa27.11■■□□□ 1.93
SEMA3B-202ENST00000418576 PLA2R1Q13018 1463 aa27.1■■□□□ 1.93
SEMA3B-202ENST00000418576 DHX57Q6P158 1386 aaKnown RBP27.1■■□□□ 1.93
SEMA3B-202ENST00000418576 STAG3Q9UJ98 1225 aa27.09■■□□□ 1.93
SEMA3B-202ENST00000418576 A2ML1A8K2U0 1454 aa27.09■■□□□ 1.93
SEMA3B-202ENST00000418576 CEP170BQ9Y4F5 1589 aaPredicted RBP27.07■■□□□ 1.92
SEMA3B-202ENST00000418576 CCDC144AA2RUR9 1427 aa27.06■■□□□ 1.92
SEMA3B-202ENST00000418576 ANKRD30BQ9BXX2 1392 aa27.06■■□□□ 1.92
SEMA3B-202ENST00000418576 LMTK3Q96Q04 1460 aa27.05■■□□□ 1.92
SEMA3B-202ENST00000418576 UGGT1Q9NYU2 1555 aa27.05■■□□□ 1.92
SEMA3B-202ENST00000418576 THEMISQ8N1K5 641 aaPredicted RBP27.04■■□□□ 1.92
SEMA3B-202ENST00000418576 PIK3C2BO00750 1634 aa27.04■■□□□ 1.92
SEMA3B-202ENST00000418576 ZNF142P52746 1687 aaPredicted RBP27.03■■□□□ 1.92
SEMA3B-202ENST00000418576 CHGAP10645 457 aaKnown RBP27.02■■□□□ 1.92
SEMA3B-202ENST00000418576 CLTCL1P53675 1640 aa27■■□□□ 1.91
SEMA3B-202ENST00000418576 ADGRB3O60242 1522 aa26.97■■□□□ 1.91
SEMA3B-202ENST00000418576 KDM5AP29375 1690 aaKnown RBP26.97■■□□□ 1.91
SEMA3B-202ENST00000418576 HSPA2P54652 639 aa26.97■■□□□ 1.91
SEMA3B-202ENST00000418576 UBR1Q8IWV7 1749 aa26.96■■□□□ 1.91
SEMA3B-202ENST00000418576 TMEM131LA2VDJ0 1609 aa26.93■■□□□ 1.9
SEMA3B-202ENST00000418576 ZNF326Q5BKZ1 582 aaKnown RBP26.92■■□□□ 1.9
SEMA3B-202ENST00000418576 KIF1BO60333 1816 aa26.92■■□□□ 1.9
SEMA3B-202ENST00000418576 TMEM2Q9UHN6 1383 aa26.9■■□□□ 1.9
SEMA3B-202ENST00000418576 HDGFP51858 240 aaKnown RBP26.9■■□□□ 1.9
SEMA3B-202ENST00000418576 CCER1Q8TC90 406 aaPredicted RBP26.9■■□□□ 1.9
SEMA3B-202ENST00000418576 EID1Q9Y6B2 187 aa26.89■■□□□ 1.89
SEMA3B-202ENST00000418576 ANKLE2Q86XL3 938 aa26.88■■□□□ 1.89
SEMA3B-202ENST00000418576 CLSPNQ9HAW4 1339 aa26.87■■□□□ 1.89
SEMA3B-202ENST00000418576 RGL3Q3MIN7 710 aa26.86■■□□□ 1.89
SEMA3B-202ENST00000418576 SLIT1O75093 1534 aa26.86■■□□□ 1.89
SEMA3B-202ENST00000418576 SPATA31E1Q6ZUB1 1445 aa26.85■■□□□ 1.89
SEMA3B-202ENST00000418576 ARHGAP23Q9P227 1491 aa26.85■■□□□ 1.89
SEMA3B-202ENST00000418576 RPGRIP1LQ68CZ1 1315 aa26.85■■□□□ 1.89
SEMA3B-202ENST00000418576 TXNDC2Q86VQ3 553 aa26.84■■□□□ 1.89
SEMA3B-202ENST00000418576 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.84■■□□□ 1.89
SEMA3B-202ENST00000418576 SIN3AQ96ST3 1273 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms