RNA–Protein interactions for RNA: ENST00000417901.5

USP19-206, Transcript of ubiquitin specific peptidase 19, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP19, Length 4,706 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP19-206ENST00000417901 MYBBP1AQ9BQG0 1328 aaKnown RBP17.04■□□□□ 0.32
USP19-206ENST00000417901 DAPK1P53355 1430 aa17.04■□□□□ 0.32
USP19-206ENST00000417901 AFAP1Q8N556 730 aa17.04■□□□□ 0.32
USP19-206ENST00000417901 PANK3Q9H999 370 aa17.04■□□□□ 0.32
USP19-206ENST00000417901 C9orf84Q5VXU9 1444 aa17.03■□□□□ 0.32
USP19-206ENST00000417901 FRAT1Q92837 279 aaPredicted RBP17.03■□□□□ 0.32
USP19-206ENST00000417901 NCLP19338 710 aaKnown RBP17.02■□□□□ 0.32
USP19-206ENST00000417901 ZBTB7CA1YPR0 619 aa17.02■□□□□ 0.32
USP19-206ENST00000417901 TRAK1Q9UPV9 953 aa17.02■□□□□ 0.32
USP19-206ENST00000417901 PTMAP06454 111 aaKnown RBP17.02■□□□□ 0.32
USP19-206ENST00000417901 ZNF608Q9ULD9 1512 aaPredicted RBP17.02■□□□□ 0.31
USP19-206ENST00000417901 KIF7Q2M1P5 1343 aa17.02■□□□□ 0.31
USP19-206ENST00000417901 RCAN3Q9UKA8 241 aa17.01■□□□□ 0.31
USP19-206ENST00000417901 VGFO15240 615 aaPredicted RBP17.01■□□□□ 0.31
USP19-206ENST00000417901 ROCK1Q13464 1354 aa17■□□□□ 0.31
USP19-206ENST00000417901 MS4A1P11836 297 aa17■□□□□ 0.31
USP19-206ENST00000417901 NUTM2DQ5VT03 806 aaPredicted RBP17■□□□□ 0.31
USP19-206ENST00000417901 PLEKHG5O94827 1062 aa17■□□□□ 0.31
USP19-206ENST00000417901 PDE3BQ13370 1112 aa17■□□□□ 0.31
USP19-206ENST00000417901 KIAA1107Q9UPP5 1409 aa16.99■□□□□ 0.31
USP19-206ENST00000417901 PLEKHH2Q8IVE3 1493 aa16.99■□□□□ 0.31
USP19-206ENST00000417901 WASHC2AQ641Q2 1341 aa16.99■□□□□ 0.31
USP19-206ENST00000417901 ARID3AQ99856 593 aa16.98■□□□□ 0.31
USP19-206ENST00000417901 TERF2IPQ9NYB0 399 aa16.98■□□□□ 0.31
USP19-206ENST00000417901 PLB1Q6P1J6 1458 aa16.97■□□□□ 0.31
USP19-206ENST00000417901 U2AF1L5P0DN76 240 aaPredicted RBP16.97■□□□□ 0.31
USP19-206ENST00000417901 U2AF1Q01081 240 aaKnown RBP eCLIP16.97■□□□□ 0.31
USP19-206ENST00000417901 CNTLNQ9NXG0 1405 aa16.95■□□□□ 0.3
USP19-206ENST00000417901 ZBED9Q6R2W3 1325 aa16.94■□□□□ 0.3
USP19-206ENST00000417901 NBPF8Q3BBV2 869 aa16.94■□□□□ 0.3
USP19-206ENST00000417901 PTPN23Q9H3S7 1636 aa16.93■□□□□ 0.3
USP19-206ENST00000417901 GOLGA6L22H0YM25 854 aa16.93■□□□□ 0.3
USP19-206ENST00000417901 VSIG10Q8N0Z9 540 aa16.93■□□□□ 0.3
USP19-206ENST00000417901 CHMP4BQ9H444 224 aaKnown RBP16.93■□□□□ 0.3
USP19-206ENST00000417901 RGS3P49796 1198 aa16.92■□□□□ 0.3
USP19-206ENST00000417901 GOLGA2Q08379 1002 aa16.92■□□□□ 0.3
USP19-206ENST00000417901 TPRNQ4KMQ1 711 aa16.91■□□□□ 0.3
USP19-206ENST00000417901 ABCC5O15440 1437 aa16.9■□□□□ 0.3
USP19-206ENST00000417901 FAM69CQ0P6D2 419 aa16.9■□□□□ 0.3
USP19-206ENST00000417901 LMOD2Q6P5Q4 547 aa16.9■□□□□ 0.3
USP19-206ENST00000417901 WDR97A6NE52 1622 aa16.9■□□□□ 0.3
USP19-206ENST00000417901 EVC2Q86UK5 1308 aa16.89■□□□□ 0.29
USP19-206ENST00000417901 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
USP19-206ENST00000417901 SOX12O15370 315 aa16.88■□□□□ 0.29
USP19-206ENST00000417901 EID1Q9Y6B2 187 aa16.87■□□□□ 0.29
USP19-206ENST00000417901 CAMSAP2Q08AD1 1489 aa16.86■□□□□ 0.29
USP19-206ENST00000417901 CCDC146Q8IYE0 955 aa16.86■□□□□ 0.29
USP19-206ENST00000417901 THOC2Q8NI27 1593 aaKnown RBP16.85■□□□□ 0.29
USP19-206ENST00000417901 HAP1P54257 671 aaPredicted RBP16.85■□□□□ 0.29
USP19-206ENST00000417901 AKNAQ7Z591 1439 aa16.85■□□□□ 0.29
USP19-206ENST00000417901 SCAPERQ9BY12 1400 aa16.85■□□□□ 0.29
USP19-206ENST00000417901 CENPJQ9HC77 1338 aaPredicted RBP16.84■□□□□ 0.29
USP19-206ENST00000417901 PLCB2Q00722 1185 aa16.84■□□□□ 0.29
USP19-206ENST00000417901 ANKRD30BQ9BXX2 1392 aa16.84■□□□□ 0.29
USP19-206ENST00000417901 CGNL1Q0VF96 1302 aa16.84■□□□□ 0.29
USP19-206ENST00000417901 CCDC141Q6ZP82 1450 aa16.84■□□□□ 0.29
USP19-206ENST00000417901 CALD1Q05682 793 aaKnown RBP16.84■□□□□ 0.29
USP19-206ENST00000417901 NCOA1Q15788 1441 aa16.83■□□□□ 0.29
USP19-206ENST00000417901 NBPF1Q3BBV0 1214 aa16.83■□□□□ 0.29
USP19-206ENST00000417901 IPO8O15397 1037 aaKnown RBP16.82■□□□□ 0.28
USP19-206ENST00000417901 PRKCSHP14314 528 aaPredicted RBP16.81■□□□□ 0.28
USP19-206ENST00000417901 KIF14Q15058 1648 aa16.8■□□□□ 0.28
USP19-206ENST00000417901 CFAP70Q5T0N1 1121 aa16.8■□□□□ 0.28
USP19-206ENST00000417901 CTTNBP2Q8WZ74 1663 aa16.79■□□□□ 0.28
USP19-206ENST00000417901 MINK1Q8N4C8 1332 aaPredicted RBP16.79■□□□□ 0.28
USP19-206ENST00000417901 RTF1Q92541 710 aaKnown RBP16.78■□□□□ 0.28
USP19-206ENST00000417901 L1TD1Q5T7N2 865 aaKnown RBP16.78■□□□□ 0.28
USP19-206ENST00000417901 TCERG1O14776 1098 aaKnown RBP16.78■□□□□ 0.28
USP19-206ENST00000417901 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.78■□□□□ 0.28
USP19-206ENST00000417901 MSNP26038 577 aaKnown RBP16.77■□□□□ 0.28
USP19-206ENST00000417901 BRD4O60885 1362 aaPredicted RBP16.77■□□□□ 0.28
USP19-206ENST00000417901 HSP90AA2PQ14568 343 aaPredicted RBP16.77■□□□□ 0.27
USP19-206ENST00000417901 NGEFQ8N5V2 710 aa16.76■□□□□ 0.27
USP19-206ENST00000417901 UGGT2Q9NYU1 1516 aa16.76■□□□□ 0.27
USP19-206ENST00000417901 PTPRKQ15262 1439 aa16.75■□□□□ 0.27
USP19-206ENST00000417901 PAK3O75914 559 aaPredicted RBP16.75■□□□□ 0.27
USP19-206ENST00000417901 GPATCH8Q9UKJ3 1502 aaKnown RBP16.75■□□□□ 0.27
USP19-206ENST00000417901 GZF1Q9H116 711 aaPredicted RBP16.75■□□□□ 0.27
USP19-206ENST00000417901 APAF1O14727 1248 aa16.74■□□□□ 0.27
USP19-206ENST00000417901 NGDNQ8NEJ9 315 aaKnown RBP16.74■□□□□ 0.27
USP19-206ENST00000417901 SPRYD3Q8NCJ5 442 aa16.74■□□□□ 0.27
USP19-206ENST00000417901 TMEM132EQ6IEE7 984 aa16.74■□□□□ 0.27
USP19-206ENST00000417901 ADAMTS12P58397 1594 aa16.73■□□□□ 0.27
USP19-206ENST00000417901 NUP153P49790 1475 aaKnown RBP16.73■□□□□ 0.27
USP19-206ENST00000417901 E9PSI1 815 aa16.73■□□□□ 0.27
USP19-206ENST00000417901 CASC1Q6TDU7 716 aa16.73■□□□□ 0.27
USP19-206ENST00000417901 ANO8Q9HCE9 1232 aaPredicted RBP16.73■□□□□ 0.27
USP19-206ENST00000417901 RAPGEF6Q8TEU7 1601 aa16.73■□□□□ 0.27
USP19-206ENST00000417901 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.73■□□□□ 0.27
USP19-206ENST00000417901 RRP1P56182 461 aaKnown RBP16.72■□□□□ 0.27
USP19-206ENST00000417901 RWDD1Q9H446 243 aaPredicted RBP16.72■□□□□ 0.27
USP19-206ENST00000417901 RRP7AQ9Y3A4 280 aaKnown RBP16.72■□□□□ 0.27
USP19-206ENST00000417901 A0A0G2JS52 829 aa16.72■□□□□ 0.27
USP19-206ENST00000417901 SMC4Q9NTJ3 1288 aa16.72■□□□□ 0.27
USP19-206ENST00000417901 NUTM2FA1L443 756 aa16.71■□□□□ 0.27
USP19-206ENST00000417901 RAPGEF3O95398 923 aa16.71■□□□□ 0.26
USP19-206ENST00000417901 ATP10BO94823 1461 aa16.7■□□□□ 0.26
USP19-206ENST00000417901 RPRD2Q5VT52 1461 aaKnown RBP16.7■□□□□ 0.26
USP19-206ENST00000417901 LMOD3Q0VAK6 560 aa16.7■□□□□ 0.26
USP19-206ENST00000417901 KIF21AQ7Z4S6 1674 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms