RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 SHANK2Q9UPX8 1470 aa10.4□□□□□ -0.74
NCL-203ENST00000417652 CNTLNQ9NXG0 1405 aa10.4□□□□□ -0.75
NCL-203ENST00000417652 DUOX2Q9NRD8 1548 aa10.38□□□□□ -0.75
NCL-203ENST00000417652 ZMYM3Q14202 1370 aa10.38□□□□□ -0.75
NCL-203ENST00000417652 KANK1Q14678 1352 aa10.38□□□□□ -0.75
NCL-203ENST00000417652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.38□□□□□ -0.75
NCL-203ENST00000417652 CROCC2H7BZ55 1655 aa10.38□□□□□ -0.75
NCL-203ENST00000417652 NCOA1Q15788 1441 aa10.37□□□□□ -0.75
NCL-203ENST00000417652 PLXNC1O60486 1568 aa10.36□□□□□ -0.75
NCL-203ENST00000417652 SETD1BQ9UPS6 1966 aaKnown RBP10.35□□□□□ -0.75
NCL-203ENST00000417652 CLTCQ00610 1675 aaKnown RBP10.34□□□□□ -0.75
NCL-203ENST00000417652 ERBINQ96RT1 1412 aa10.34□□□□□ -0.75
NCL-203ENST00000417652 RRBP1Q9P2E9 1410 aaKnown RBP10.34□□□□□ -0.75
NCL-203ENST00000417652 ANKRD50Q9ULJ7 1429 aa10.33□□□□□ -0.76
NCL-203ENST00000417652 ROCK1Q13464 1354 aa10.33□□□□□ -0.76
NCL-203ENST00000417652 PTPRKQ15262 1439 aa10.33□□□□□ -0.76
NCL-203ENST00000417652 ADGRL2O95490 1459 aa10.32□□□□□ -0.76
NCL-203ENST00000417652 TRIM52Q96A61 297 aa10.32□□□□□ -0.76
NCL-203ENST00000417652 EIF2AK4Q9P2K8 1649 aaKnown RBP10.32□□□□□ -0.76
NCL-203ENST00000417652 HSPA2P54652 639 aa10.31□□□□□ -0.76
NCL-203ENST00000417652 FBXO31Q5XUX0 539 aaPredicted RBP10.31□□□□□ -0.76
NCL-203ENST00000417652 KDM5DQ9BY66 1539 aa10.31□□□□□ -0.76
NCL-203ENST00000417652 UHRF1BP1Q6BDS2 1440 aa10.31□□□□□ -0.76
NCL-203ENST00000417652 C3P01024 1663 aa10.31□□□□□ -0.76
NCL-203ENST00000417652 CFAP65Q6ZU64 1925 aaKnown RBP10.31□□□□□ -0.76
NCL-203ENST00000417652 MROH2AA6NES4 1674 aa10.3□□□□□ -0.76
NCL-203ENST00000417652 NPATQ14207 1427 aa10.28□□□□□ -0.76
NCL-203ENST00000417652 STAG3Q9UJ98 1225 aa10.28□□□□□ -0.76
NCL-203ENST00000417652 RNF17Q9BXT8 1623 aaKnown RBP10.28□□□□□ -0.76
NCL-203ENST00000417652 FAM135AQ9P2D6 1515 aa10.28□□□□□ -0.76
NCL-203ENST00000417652 NUP155O75694 1391 aa10.27□□□□□ -0.76
NCL-203ENST00000417652 TNRQ92752 1358 aa10.27□□□□□ -0.76
NCL-203ENST00000417652 PREX1Q8TCU6 1659 aa10.26□□□□□ -0.77
NCL-203ENST00000417652 CEP152O94986 1710 aa10.26□□□□□ -0.77
NCL-203ENST00000417652 ABCC3O15438 1527 aa10.26□□□□□ -0.77
NCL-203ENST00000417652 ZC3H13Q5T200 1668 aaKnown RBP10.25□□□□□ -0.77
NCL-203ENST00000417652 PZPP20742 1482 aa10.25□□□□□ -0.77
NCL-203ENST00000417652 DMRT2Q9Y5R5 561 aa10.25□□□□□ -0.77
NCL-203ENST00000417652 LMTK3Q96Q04 1460 aa10.24□□□□□ -0.77
NCL-203ENST00000417652 PRDM15P57071 1507 aaPredicted RBP10.24□□□□□ -0.77
NCL-203ENST00000417652 THEMISQ8N1K5 641 aaPredicted RBP10.24□□□□□ -0.77
NCL-203ENST00000417652 NAIPQ13075 1403 aa10.24□□□□□ -0.77
NCL-203ENST00000417652 MROH1Q8NDA8 1641 aa10.23□□□□□ -0.77
NCL-203ENST00000417652 CHGAP10645 457 aaKnown RBP10.23□□□□□ -0.77
NCL-203ENST00000417652 DEPDC5O75140 1603 aa10.22□□□□□ -0.77
NCL-203ENST00000417652 CAMSAP1Q5T5Y3 1602 aa10.22□□□□□ -0.77
NCL-203ENST00000417652 SLC4A1APQ9BWU0 796 aaKnown RBP10.22□□□□□ -0.77
NCL-203ENST00000417652 ACIN1Q9UKV3 1341 aaKnown RBP10.22□□□□□ -0.77
NCL-203ENST00000417652 HFM1A2PYH4 1435 aa10.22□□□□□ -0.77
NCL-203ENST00000417652 ARHGAP31Q2M1Z3 1444 aa10.22□□□□□ -0.77
NCL-203ENST00000417652 A2ML1A8K2U0 1454 aa10.2□□□□□ -0.78
NCL-203ENST00000417652 ERVK-7P63135 1459 aa10.2□□□□□ -0.78
NCL-203ENST00000417652 ANKLE2Q86XL3 938 aa10.2□□□□□ -0.78
NCL-203ENST00000417652 SETD5Q9C0A6 1442 aa10.2□□□□□ -0.78
NCL-203ENST00000417652 NCKAP5LQ9HCH0 1330 aa10.2□□□□□ -0.78
NCL-203ENST00000417652 SLC52A1Q9NWF4 448 aa10.2□□□□□ -0.78
NCL-203ENST00000417652 LMTK2Q8IWU2 1503 aa10.19□□□□□ -0.78
NCL-203ENST00000417652 NLRP1Q9C000 1473 aa10.19□□□□□ -0.78
NCL-203ENST00000417652 PKD2Q13563 968 aa10.19□□□□□ -0.78
NCL-203ENST00000417652 IDI1Q13907 227 aa10.19□□□□□ -0.78
NCL-203ENST00000417652 BCANQ96GW7 911 aa10.19□□□□□ -0.78
NCL-203ENST00000417652 EID1Q9Y6B2 187 aa10.19□□□□□ -0.78
NCL-203ENST00000417652 GCC2Q8IWJ2 1684 aa10.18□□□□□ -0.78
NCL-203ENST00000417652 MYO3AQ8NEV4 1616 aa10.18□□□□□ -0.78
NCL-203ENST00000417652 UNC13BO14795 1591 aa10.18□□□□□ -0.78
NCL-203ENST00000417652 CEP170BQ9Y4F5 1589 aaPredicted RBP10.18□□□□□ -0.78
NCL-203ENST00000417652 TET3O43151 1660 aa10.18□□□□□ -0.78
NCL-203ENST00000417652 VWDEQ8N2E2 1590 aa10.18□□□□□ -0.78
NCL-203ENST00000417652 EFCAB6Q5THR3 1501 aa10.17□□□□□ -0.78
NCL-203ENST00000417652 HDGFP51858 240 aaKnown RBP10.17□□□□□ -0.78
NCL-203ENST00000417652 SPATA31D1Q6ZQQ2 1576 aa10.17□□□□□ -0.78
NCL-203ENST00000417652 UGGT1Q9NYU2 1555 aa10.17□□□□□ -0.78
NCL-203ENST00000417652 RPRD2Q5VT52 1461 aaKnown RBP10.17□□□□□ -0.78
NCL-203ENST00000417652 IQGAP3Q86VI3 1631 aa10.16□□□□□ -0.78
NCL-203ENST00000417652 PPP1R15AO75807 674 aaPredicted RBP10.16□□□□□ -0.78
NCL-203ENST00000417652 TXNDC2Q86VQ3 553 aa10.16□□□□□ -0.78
NCL-203ENST00000417652 MPHOSPH9Q99550 1183 aa10.16□□□□□ -0.78
NCL-203ENST00000417652 SCAF1Q9H7N4 1312 aaKnown RBP10.15□□□□□ -0.78
NCL-203ENST00000417652 ZNF326Q5BKZ1 582 aaKnown RBP10.15□□□□□ -0.78
NCL-203ENST00000417652 RAB3GAP2Q9H2M9 1393 aa10.14□□□□□ -0.79
NCL-203ENST00000417652 CACNB1Q02641 598 aaPredicted RBP10.14□□□□□ -0.79
NCL-203ENST00000417652 TRIM26Q12899 539 aaPredicted RBP10.14□□□□□ -0.79
NCL-203ENST00000417652 ZNF142P52746 1687 aaPredicted RBP10.14□□□□□ -0.79
NCL-203ENST00000417652 NOS1P29475 1434 aa10.14□□□□□ -0.79
NCL-203ENST00000417652 E9PCH4 1651 aa10.12□□□□□ -0.79
NCL-203ENST00000417652 PLA2R1Q13018 1463 aa10.12□□□□□ -0.79
NCL-203ENST00000417652 HRCP23327 699 aa10.12□□□□□ -0.79
NCL-203ENST00000417652 MAPK8IP2Q13387 824 aaPredicted RBP10.12□□□□□ -0.79
NCL-203ENST00000417652 STRCQ7RTU9 1775 aa10.11□□□□□ -0.79
NCL-203ENST00000417652 PTPRTO14522 1441 aa10.11□□□□□ -0.79
NCL-203ENST00000417652 NUTM2DQ5VT03 806 aaPredicted RBP10.11□□□□□ -0.79
NCL-203ENST00000417652 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.11□□□□□ -0.79
NCL-203ENST00000417652 PIK3C2BO00750 1634 aa10.11□□□□□ -0.79
NCL-203ENST00000417652 SYNMO15061 1565 aa10.1□□□□□ -0.79
NCL-203ENST00000417652 LTKP29376 864 aa10.1□□□□□ -0.79
NCL-203ENST00000417652 TMEM2Q9UHN6 1383 aa10.1□□□□□ -0.79
NCL-203ENST00000417652 UBR1Q8IWV7 1749 aa10.1□□□□□ -0.79
NCL-203ENST00000417652 NPHP4O75161 1426 aaPredicted RBP10.09□□□□□ -0.79
NCL-203ENST00000417652 SPHKAPQ2M3C7 1700 aa10.08□□□□□ -0.8
NCL-203ENST00000417652 RGL3Q3MIN7 710 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms