RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 SHANK2Q9UPX8 1470 aa17.73■□□□□ 0.43
GABRE-202ENST00000417300 CPS1P31327 1500 aa17.72■□□□□ 0.43
GABRE-202ENST00000417300 ADGBQ8N7X0 1667 aa17.72■□□□□ 0.43
GABRE-202ENST00000417300 NPATQ14207 1427 aa17.72■□□□□ 0.43
GABRE-202ENST00000417300 KIAA1107Q9UPP5 1409 aa17.72■□□□□ 0.43
GABRE-202ENST00000417300 MBD5Q9P267 1494 aa17.71■□□□□ 0.43
GABRE-202ENST00000417300 ROCK1Q13464 1354 aa17.71■□□□□ 0.43
GABRE-202ENST00000417300 ZNF777Q9ULD5 760 aaPredicted RBP17.71■□□□□ 0.43
GABRE-202ENST00000417300 CNTLNQ9NXG0 1405 aa17.71■□□□□ 0.43
GABRE-202ENST00000417300 RAB3GAP2Q9H2M9 1393 aa17.7■□□□□ 0.42
GABRE-202ENST00000417300 ABCC1P33527 1531 aa17.7■□□□□ 0.42
GABRE-202ENST00000417300 ADGRL2O95490 1459 aa17.69■□□□□ 0.42
GABRE-202ENST00000417300 SYCP2Q9BX26 1530 aa17.69■□□□□ 0.42
GABRE-202ENST00000417300 NAIPQ13075 1403 aa17.69■□□□□ 0.42
GABRE-202ENST00000417300 CCDC141Q6ZP82 1450 aa17.69■□□□□ 0.42
GABRE-202ENST00000417300 HRCP23327 699 aa17.68■□□□□ 0.42
GABRE-202ENST00000417300 EFCAB2Q5VUJ9 269 aa17.68■□□□□ 0.42
GABRE-202ENST00000417300 SRCAPQ6ZRS2 3230 aa17.68■□□□□ 0.42
GABRE-202ENST00000417300 RSPH4AQ5TD94 716 aa17.67■□□□□ 0.42
GABRE-202ENST00000417300 AFAP1Q8N556 730 aa17.67■□□□□ 0.42
GABRE-202ENST00000417300 AGLP35573 1532 aa17.67■□□□□ 0.42
GABRE-202ENST00000417300 MAST1Q9Y2H9 1570 aa17.66■□□□□ 0.42
GABRE-202ENST00000417300 ZNF518AQ6AHZ1 1483 aa17.64■□□□□ 0.41
GABRE-202ENST00000417300 ZMYM3Q14202 1370 aa17.64■□□□□ 0.41
GABRE-202ENST00000417300 REREQ9P2R6 1566 aa17.63■□□□□ 0.41
GABRE-202ENST00000417300 UPF1Q92900 1129 aaKnown RBP eCLIP17.63■□□□□ 0.41
GABRE-202ENST00000417300 DIP2CQ9Y2E4 1556 aa17.62■□□□□ 0.41
GABRE-202ENST00000417300 ALKQ9UM73 1620 aa17.62■□□□□ 0.41
GABRE-202ENST00000417300 CCER1Q8TC90 406 aaPredicted RBP17.62■□□□□ 0.41
GABRE-202ENST00000417300 CHIC2Q9UKJ5 165 aa17.62■□□□□ 0.41
GABRE-202ENST00000417300 HNRNPMP52272 730 aaKnown RBP eCLIP17.61■□□□□ 0.412e-9■■■■■ 28.2
GABRE-202ENST00000417300 SETD1AO15047 1707 aaKnown RBP17.61■□□□□ 0.41
GABRE-202ENST00000417300 DHX57Q6P158 1386 aaKnown RBP17.6■□□□□ 0.41
GABRE-202ENST00000417300 ANKRD30AQ9BXX3 1397 aa17.6■□□□□ 0.41
GABRE-202ENST00000417300 ZNF142P52746 1687 aaPredicted RBP17.58■□□□□ 0.41
GABRE-202ENST00000417300 PLXNC1O60486 1568 aa17.58■□□□□ 0.41
GABRE-202ENST00000417300 CEP170BQ9Y4F5 1589 aaPredicted RBP17.58■□□□□ 0.41
GABRE-202ENST00000417300 TSPY4P0CV99 314 aa17.58■□□□□ 0.4
GABRE-202ENST00000417300 TSPY10P0CW01 314 aa17.58■□□□□ 0.4
GABRE-202ENST00000417300 ZEB1P37275 1124 aaPredicted RBP17.58■□□□□ 0.4
GABRE-202ENST00000417300 RRP7BPQ9NSQ0 103 aa17.58■□□□□ 0.4
GABRE-202ENST00000417300 ACIN1Q9UKV3 1341 aaKnown RBP17.57■□□□□ 0.4
GABRE-202ENST00000417300 KDM5CP41229 1560 aa17.57■□□□□ 0.4
GABRE-202ENST00000417300 MYO3AQ8NEV4 1616 aa17.56■□□□□ 0.4
GABRE-202ENST00000417300 CLSPNQ9HAW4 1339 aa17.55■□□□□ 0.4
GABRE-202ENST00000417300 MROH2AA6NES4 1674 aa17.55■□□□□ 0.4
GABRE-202ENST00000417300 ABCA6Q8N139 1617 aa17.54■□□□□ 0.4
GABRE-202ENST00000417300 RTEL1-TNFRSF6BF6WH68 1400 aa17.53■□□□□ 0.4
GABRE-202ENST00000417300 INO80Q9ULG1 1556 aaPredicted RBP17.53■□□□□ 0.4
GABRE-202ENST00000417300 MLH3Q9UHC1 1453 aa17.52■□□□□ 0.4
GABRE-202ENST00000417300 KIF15Q9NS87 1388 aa17.52■□□□□ 0.39
GABRE-202ENST00000417300 ANKRD50Q9ULJ7 1429 aa17.5■□□□□ 0.39
GABRE-202ENST00000417300 VWDEQ8N2E2 1590 aa17.49■□□□□ 0.39
GABRE-202ENST00000417300 ATP7AQ04656 1500 aa17.48■□□□□ 0.39
GABRE-202ENST00000417300 DUOX2Q9NRD8 1548 aa17.48■□□□□ 0.39
GABRE-202ENST00000417300 ANKLE2Q86XL3 938 aa17.47■□□□□ 0.39
GABRE-202ENST00000417300 A2ML1A8K2U0 1454 aa17.47■□□□□ 0.39
GABRE-202ENST00000417300 SPAG9O60271 1321 aaKnown RBP17.47■□□□□ 0.39
GABRE-202ENST00000417300 NEURL4Q96JN8 1562 aa17.45■□□□□ 0.38
GABRE-202ENST00000417300 ERBINQ96RT1 1412 aa17.45■□□□□ 0.38
GABRE-202ENST00000417300 POLR1AO95602 1720 aaPredicted RBP17.44■□□□□ 0.38
GABRE-202ENST00000417300 RNF17Q9BXT8 1623 aaKnown RBP17.44■□□□□ 0.38
GABRE-202ENST00000417300 KIDINS220Q9ULH0 1771 aa17.44■□□□□ 0.38
GABRE-202ENST00000417300 KDM5DQ9BY66 1539 aa17.44■□□□□ 0.38
GABRE-202ENST00000417300 TRIM52Q96A61 297 aa17.44■□□□□ 0.38
GABRE-202ENST00000417300 LRRC7Q96NW7 1537 aa17.43■□□□□ 0.38
GABRE-202ENST00000417300 UNC13BO14795 1591 aa17.42■□□□□ 0.38
GABRE-202ENST00000417300 CLTCQ00610 1675 aaKnown RBP17.42■□□□□ 0.38
GABRE-202ENST00000417300 PZPP20742 1482 aa17.39■□□□□ 0.37
GABRE-202ENST00000417300 EIF2AK4Q9P2K8 1649 aaKnown RBP17.39■□□□□ 0.37
GABRE-202ENST00000417300 NPHP4O75161 1426 aaPredicted RBP17.38■□□□□ 0.37
GABRE-202ENST00000417300 GGT6Q6P531 493 aa17.37■□□□□ 0.37
GABRE-202ENST00000417300 THEMISQ8N1K5 641 aaPredicted RBP17.36■□□□□ 0.37
GABRE-202ENST00000417300 FAM135BQ49AJ0 1406 aa17.36■□□□□ 0.37
GABRE-202ENST00000417300 MPHOSPH9Q99550 1183 aa17.35■□□□□ 0.37
GABRE-202ENST00000417300 DEPDC5O75140 1603 aa17.35■□□□□ 0.37
GABRE-202ENST00000417300 DHX29Q7Z478 1369 aaKnown RBP17.34■□□□□ 0.37
GABRE-202ENST00000417300 IQGAP3Q86VI3 1631 aa17.34■□□□□ 0.37
GABRE-202ENST00000417300 SYNMO15061 1565 aa17.33■□□□□ 0.37
GABRE-202ENST00000417300 MED14O60244 1454 aa17.33■□□□□ 0.37
GABRE-202ENST00000417300 ZNF772Q68DY9 489 aaPredicted RBP17.33■□□□□ 0.36
GABRE-202ENST00000417300 A2MP01023 1474 aa17.32■□□□□ 0.36
GABRE-202ENST00000417300 NUP155O75694 1391 aa17.32■□□□□ 0.36
GABRE-202ENST00000417300 FAM135AQ9P2D6 1515 aa17.31■□□□□ 0.36
GABRE-202ENST00000417300 STRCP1A6NGW2 1772 aa17.31■□□□□ 0.36
GABRE-202ENST00000417300 TNRQ92752 1358 aa17.3■□□□□ 0.36
GABRE-202ENST00000417300 RXRBP28702 533 aa17.3■□□□□ 0.36
GABRE-202ENST00000417300 SLC4A1APQ9BWU0 796 aaKnown RBP17.3■□□□□ 0.36
GABRE-202ENST00000417300 FOXD1Q16676 465 aa17.29■□□□□ 0.36
GABRE-202ENST00000417300 PRDM15P57071 1507 aaPredicted RBP17.28■□□□□ 0.36
GABRE-202ENST00000417300 ZRANB1Q9UGI0 708 aa17.28■□□□□ 0.36
GABRE-202ENST00000417300 MEX3CQ5U5Q3 659 aaKnown RBP17.27■□□□□ 0.36
GABRE-202ENST00000417300 MROH1Q8NDA8 1641 aa17.27■□□□□ 0.36
GABRE-202ENST00000417300 IQGAP1P46940 1657 aa17.26■□□□□ 0.35
GABRE-202ENST00000417300 FBXO31Q5XUX0 539 aaPredicted RBP17.26■□□□□ 0.35
GABRE-202ENST00000417300 ANKRD30BQ9BXX2 1392 aa17.26■□□□□ 0.35
GABRE-202ENST00000417300 JCADQ9P266 1359 aa17.25■□□□□ 0.35
GABRE-202ENST00000417300 TIMELESSQ9UNS1 1208 aa17.24■□□□□ 0.35
GABRE-202ENST00000417300 SIN3AQ96ST3 1273 aa17.23■□□□□ 0.35
GABRE-202ENST00000417300 TET3O43151 1660 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms