RNA–Protein interactions for RNA: ENST00000416957.5

FNDC3B-203, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 3,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-203ENST00000416957 MYOM3Q5VTT5 1437 aa11.59□□□□□ -0.55
FNDC3B-203ENST00000416957 TCOF1Q13428 1488 aaKnown RBP11.59□□□□□ -0.55
FNDC3B-203ENST00000416957 ABCC1P33527 1531 aa11.59□□□□□ -0.55
FNDC3B-203ENST00000416957 ARHGEF5Q12774 1597 aa11.58□□□□□ -0.56
FNDC3B-203ENST00000416957 CCNB3Q8WWL7 1395 aa11.58□□□□□ -0.56
FNDC3B-203ENST00000416957 ARHGAP5Q13017 1502 aa11.58□□□□□ -0.56
FNDC3B-203ENST00000416957 SAMD9LQ8IVG5 1584 aa11.57□□□□□ -0.56
FNDC3B-203ENST00000416957 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
FNDC3B-203ENST00000416957 ZNF592Q92610 1267 aa11.57□□□□□ -0.56
FNDC3B-203ENST00000416957 CROCC2H7BZ55 1655 aa11.56□□□□□ -0.56
FNDC3B-203ENST00000416957 PTPN23Q9H3S7 1636 aa11.56□□□□□ -0.56
FNDC3B-203ENST00000416957 TICAM2Q86XR7 235 aa11.56□□□□□ -0.56
FNDC3B-203ENST00000416957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.56□□□□□ -0.56
FNDC3B-203ENST00000416957 TSPOAP1O95153 1857 aa11.56□□□□□ -0.56
FNDC3B-203ENST00000416957 FANCAO15360 1455 aa11.56□□□□□ -0.56
FNDC3B-203ENST00000416957 KIAA1107Q9UPP5 1409 aa11.56□□□□□ -0.56
FNDC3B-203ENST00000416957 CANXP27824 592 aaKnown RBP11.56□□□□□ -0.56
FNDC3B-203ENST00000416957 GTF2E1P29083 439 aaPredicted RBP11.56□□□□□ -0.56
FNDC3B-203ENST00000416957 ARID3CA6NKF2 412 aa11.55□□□□□ -0.56
FNDC3B-203ENST00000416957 FAM69CQ0P6D2 419 aa11.55□□□□□ -0.56
FNDC3B-203ENST00000416957 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
FNDC3B-203ENST00000416957 ZMYM4Q5VZL5 1548 aa11.55□□□□□ -0.56
FNDC3B-203ENST00000416957 RICTORQ6R327 1708 aa11.55□□□□□ -0.56
FNDC3B-203ENST00000416957 CHRM1P11229 460 aaPredicted RBP11.54□□□□□ -0.56
FNDC3B-203ENST00000416957 KANK4Q5T7N3 995 aaPredicted RBP11.54□□□□□ -0.56
FNDC3B-203ENST00000416957 MAST1Q9Y2H9 1570 aa11.54□□□□□ -0.56
FNDC3B-203ENST00000416957 FGD6Q6ZV73 1430 aa11.54□□□□□ -0.56
FNDC3B-203ENST00000416957 CAMSAP2Q08AD1 1489 aa11.53□□□□□ -0.56
FNDC3B-203ENST00000416957 KDM5CP41229 1560 aa11.53□□□□□ -0.56
FNDC3B-203ENST00000416957 RRBP1Q9P2E9 1410 aaKnown RBP11.53□□□□□ -0.56
FNDC3B-203ENST00000416957 DNMT1P26358 1616 aaKnown RBP11.53□□□□□ -0.56
FNDC3B-203ENST00000416957 AKNAQ7Z591 1439 aa11.52□□□□□ -0.57
FNDC3B-203ENST00000416957 SHANK2Q9UPX8 1470 aa11.52□□□□□ -0.57
FNDC3B-203ENST00000416957 FRMPD1Q5SYB0 1578 aa11.52□□□□□ -0.57
FNDC3B-203ENST00000416957 TMED8Q6PL24 325 aaPredicted RBP11.51□□□□□ -0.57
FNDC3B-203ENST00000416957 KDM6BO15054 1643 aa11.51□□□□□ -0.57
FNDC3B-203ENST00000416957 KCNH8Q96L42 1107 aa11.51□□□□□ -0.57
FNDC3B-203ENST00000416957 ADGBQ8N7X0 1667 aa11.51□□□□□ -0.57
FNDC3B-203ENST00000416957 CNGB1Q14028 1251 aaPredicted RBP11.5□□□□□ -0.57
FNDC3B-203ENST00000416957 EFCAB2Q5VUJ9 269 aa11.5□□□□□ -0.57
FNDC3B-203ENST00000416957 ADGRL1O94910 1474 aa11.5□□□□□ -0.57
FNDC3B-203ENST00000416957 INO80Q9ULG1 1556 aaPredicted RBP11.5□□□□□ -0.57
FNDC3B-203ENST00000416957 POGZQ7Z3K3 1410 aa11.49□□□□□ -0.57
FNDC3B-203ENST00000416957 ZNF518AQ6AHZ1 1483 aa11.49□□□□□ -0.57
FNDC3B-203ENST00000416957 KCNG1Q9UIX4 513 aa11.49□□□□□ -0.57
FNDC3B-203ENST00000416957 SYCP2Q9BX26 1530 aa11.49□□□□□ -0.57
FNDC3B-203ENST00000416957 MAGI2Q86UL8 1455 aa11.49□□□□□ -0.57
FNDC3B-203ENST00000416957 HECW2Q9P2P5 1572 aa11.48□□□□□ -0.57
FNDC3B-203ENST00000416957 DENND4BO75064 1496 aaPredicted RBP11.48□□□□□ -0.57
FNDC3B-203ENST00000416957 PLXNC1O60486 1568 aa11.48□□□□□ -0.57
FNDC3B-203ENST00000416957 RTL5Q5HYW3 569 aaPredicted RBP11.48□□□□□ -0.57
FNDC3B-203ENST00000416957 RNF216Q9NWF9 866 aaPredicted RBP11.48□□□□□ -0.57
FNDC3B-203ENST00000416957 REREQ9P2R6 1566 aa11.48□□□□□ -0.57
FNDC3B-203ENST00000416957 CCDC141Q6ZP82 1450 aa11.48□□□□□ -0.57
FNDC3B-203ENST00000416957 STAC3Q96MF2 364 aa11.47□□□□□ -0.57
FNDC3B-203ENST00000416957 MBD5Q9P267 1494 aa11.47□□□□□ -0.57
FNDC3B-203ENST00000416957 CFDP1Q9UEE9 299 aaPredicted RBP11.46□□□□□ -0.57
FNDC3B-203ENST00000416957 ARHGEF40Q8TER5 1519 aa11.46□□□□□ -0.57
FNDC3B-203ENST00000416957 PUS7Q96PZ0 661 aaKnown RBP11.46□□□□□ -0.57
FNDC3B-203ENST00000416957 HSP90AA2PQ14568 343 aaPredicted RBP11.46□□□□□ -0.58
FNDC3B-203ENST00000416957 RTEL1-TNFRSF6BF6WH68 1400 aa11.45□□□□□ -0.58
FNDC3B-203ENST00000416957 MLH3Q9UHC1 1453 aa11.45□□□□□ -0.58
FNDC3B-203ENST00000416957 TRHP20396 242 aaPredicted RBP11.45□□□□□ -0.58
FNDC3B-203ENST00000416957 ARHGEF12Q9NZN5 1544 aa11.45□□□□□ -0.58
FNDC3B-203ENST00000416957 BCORL1Q5H9F3 1711 aa11.45□□□□□ -0.58
FNDC3B-203ENST00000416957 ZFYVE16Q7Z3T8 1539 aa11.45□□□□□ -0.58
FNDC3B-203ENST00000416957 ADGRL2O95490 1459 aa11.44□□□□□ -0.58
FNDC3B-203ENST00000416957 CLSTN1O94985 981 aa11.44□□□□□ -0.58
FNDC3B-203ENST00000416957 SCAPERQ9BY12 1400 aa11.44□□□□□ -0.58
FNDC3B-203ENST00000416957 FANCIQ9NVI1 1328 aa11.43□□□□□ -0.58
FNDC3B-203ENST00000416957 ATP7AQ04656 1500 aa11.43□□□□□ -0.58
FNDC3B-203ENST00000416957 FOXD1Q16676 465 aa11.42□□□□□ -0.58
FNDC3B-203ENST00000416957 KIDINS220Q9ULH0 1771 aa11.42□□□□□ -0.58
FNDC3B-203ENST00000416957 DAPK1P53355 1430 aa11.42□□□□□ -0.58
FNDC3B-203ENST00000416957 EIF2AK4Q9P2K8 1649 aaKnown RBP11.42□□□□□ -0.58
FNDC3B-203ENST00000416957 GCC2Q8IWJ2 1684 aa11.42□□□□□ -0.58
FNDC3B-203ENST00000416957 RRP9O43818 475 aaKnown RBP11.41□□□□□ -0.58
FNDC3B-203ENST00000416957 ABCA6Q8N139 1617 aa11.4□□□□□ -0.58
FNDC3B-203ENST00000416957 DIP2CQ9Y2E4 1556 aa11.4□□□□□ -0.58
FNDC3B-203ENST00000416957 PLCD3Q8N3E9 789 aa11.4□□□□□ -0.58
FNDC3B-203ENST00000416957 ABCC5O15440 1437 aa11.4□□□□□ -0.59
FNDC3B-203ENST00000416957 ROCK1Q13464 1354 aa11.39□□□□□ -0.59
FNDC3B-203ENST00000416957 PLCD4Q9BRC7 762 aa11.39□□□□□ -0.59
FNDC3B-203ENST00000416957 TRAPPC8Q9Y2L5 1435 aa11.39□□□□□ -0.59
FNDC3B-203ENST00000416957 FAM135AQ9P2D6 1515 aa11.39□□□□□ -0.59
FNDC3B-203ENST00000416957 NBR1Q14596 966 aa11.39□□□□□ -0.59
FNDC3B-203ENST00000416957 PSMD1Q99460 953 aa11.39□□□□□ -0.59
FNDC3B-203ENST00000416957 CCER1Q8TC90 406 aaPredicted RBP11.38□□□□□ -0.59
FNDC3B-203ENST00000416957 COL17A1Q9UMD9 1497 aaPredicted RBP11.38□□□□□ -0.59
FNDC3B-203ENST00000416957 FAM43BQ6ZT52 329 aaPredicted RBP11.38□□□□□ -0.59
FNDC3B-203ENST00000416957 C9orf84Q5VXU9 1444 aa11.38□□□□□ -0.59
FNDC3B-203ENST00000416957 AGLP35573 1532 aa11.37□□□□□ -0.59
FNDC3B-203ENST00000416957 ZNF526Q8TF50 670 aaPredicted RBP11.37□□□□□ -0.59
FNDC3B-203ENST00000416957 DUOX2Q9NRD8 1548 aa11.37□□□□□ -0.59
FNDC3B-203ENST00000416957 PATL2C9JE40 543 aaKnown RBP11.36□□□□□ -0.59
FNDC3B-203ENST00000416957 RGS3P49796 1198 aa11.36□□□□□ -0.59
FNDC3B-203ENST00000416957 PRDM4Q9UKN5 801 aa11.36□□□□□ -0.59
FNDC3B-203ENST00000416957 RNF17Q9BXT8 1623 aaKnown RBP11.35□□□□□ -0.59
FNDC3B-203ENST00000416957 ARID4BQ4LE39 1312 aaPredicted RBP11.35□□□□□ -0.59
FNDC3B-203ENST00000416957 ERBINQ96RT1 1412 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms