RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 DEPDC5O75140 1603 aa19.34■□□□□ 0.69
ZNF3-206ENST00000415068 IQGAP3Q86VI3 1631 aa19.34■□□□□ 0.69
ZNF3-206ENST00000415068 PPP1R15AO75807 674 aaPredicted RBP19.34■□□□□ 0.69
ZNF3-206ENST00000415068 FAM135AQ9P2D6 1515 aa19.33■□□□□ 0.68
ZNF3-206ENST00000415068 ATP10AO60312 1499 aa19.33■□□□□ 0.68
ZNF3-206ENST00000415068 VWDEQ8N2E2 1590 aa19.32■□□□□ 0.68
ZNF3-206ENST00000415068 RPRD2Q5VT52 1461 aaKnown RBP19.31■□□□□ 0.68
ZNF3-206ENST00000415068 PPP6R1Q9UPN7 881 aa19.3■□□□□ 0.68
ZNF3-206ENST00000415068 FRMPD1Q5SYB0 1578 aa19.3■□□□□ 0.68
ZNF3-206ENST00000415068 KIF3BO15066 747 aa19.29■□□□□ 0.68
ZNF3-206ENST00000415068 NEUROD1Q13562 356 aa19.29■□□□□ 0.68
ZNF3-206ENST00000415068 KANK1Q14678 1352 aa19.29■□□□□ 0.68
ZNF3-206ENST00000415068 REREQ9P2R6 1566 aa19.28■□□□□ 0.68
ZNF3-206ENST00000415068 MYT1LQ9UL68 1186 aa19.28■□□□□ 0.68
ZNF3-206ENST00000415068 TSPOAP1O95153 1857 aa19.27■□□□□ 0.68
ZNF3-206ENST00000415068 LMTK2Q8IWU2 1503 aa19.26■□□□□ 0.67
ZNF3-206ENST00000415068 RNF17Q9BXT8 1623 aaKnown RBP19.26■□□□□ 0.67
ZNF3-206ENST00000415068 PRDM15P57071 1507 aaPredicted RBP19.25■□□□□ 0.67
ZNF3-206ENST00000415068 DIP2CQ9Y2E4 1556 aa19.25■□□□□ 0.67
ZNF3-206ENST00000415068 COL17A1Q9UMD9 1497 aaPredicted RBP19.25■□□□□ 0.67
ZNF3-206ENST00000415068 TONSLQ96HA7 1378 aa19.24■□□□□ 0.67
ZNF3-206ENST00000415068 FOXD1Q16676 465 aa19.24■□□□□ 0.67
ZNF3-206ENST00000415068 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.24■□□□□ 0.674e-11■□□□□ 11.1
ZNF3-206ENST00000415068 ABCA6Q8N139 1617 aa19.24■□□□□ 0.67
ZNF3-206ENST00000415068 AGLP35573 1532 aa19.23■□□□□ 0.67
ZNF3-206ENST00000415068 MROH1Q8NDA8 1641 aa19.22■□□□□ 0.67
ZNF3-206ENST00000415068 PTPRTO14522 1441 aa19.22■□□□□ 0.67
ZNF3-206ENST00000415068 PLA2R1Q13018 1463 aa19.21■□□□□ 0.67
ZNF3-206ENST00000415068 YEATS2Q9ULM3 1422 aa19.2■□□□□ 0.66
ZNF3-206ENST00000415068 TET3O43151 1660 aa19.2■□□□□ 0.66
ZNF3-206ENST00000415068 STAC3Q96MF2 364 aa19.19■□□□□ 0.66
ZNF3-206ENST00000415068 L3MBTL2Q969R5 705 aa19.18■□□□□ 0.66
ZNF3-206ENST00000415068 ARHGAP31Q2M1Z3 1444 aa19.16■□□□□ 0.66
ZNF3-206ENST00000415068 ZNF316A6NFI3 1004 aaPredicted RBP19.14■□□□□ 0.65
ZNF3-206ENST00000415068 E9PCH4 1651 aa19.12■□□□□ 0.65
ZNF3-206ENST00000415068 NEURL4Q96JN8 1562 aa19.12■□□□□ 0.65
ZNF3-206ENST00000415068 CCDC144AA2RUR9 1427 aa19.12■□□□□ 0.65
ZNF3-206ENST00000415068 WASHC2CQ9Y4E1 1318 aa19.11■□□□□ 0.65
ZNF3-206ENST00000415068 TRHP20396 242 aaPredicted RBP19.11■□□□□ 0.65
ZNF3-206ENST00000415068 GGT6Q6P531 493 aa19.11■□□□□ 0.65
ZNF3-206ENST00000415068 EFCAB6Q5THR3 1501 aa19.1■□□□□ 0.65
ZNF3-206ENST00000415068 UHRF1BP1Q6BDS2 1440 aa19.09■□□□□ 0.65
ZNF3-206ENST00000415068 TRPM2O94759 1503 aa19.09■□□□□ 0.65
ZNF3-206ENST00000415068 ARHGEF40Q8TER5 1519 aa19.09■□□□□ 0.65
ZNF3-206ENST00000415068 ABCC3O15438 1527 aa19.08■□□□□ 0.64
ZNF3-206ENST00000415068 ZC3H13Q5T200 1668 aaKnown RBP19.08■□□□□ 0.64
ZNF3-206ENST00000415068 SPATA31E1Q6ZUB1 1445 aa19.05■□□□□ 0.64
ZNF3-206ENST00000415068 NOS1P29475 1434 aa19.04■□□□□ 0.64
ZNF3-206ENST00000415068 NPATQ14207 1427 aa19.04■□□□□ 0.64
ZNF3-206ENST00000415068 CNTLNQ9NXG0 1405 aa19.04■□□□□ 0.64
ZNF3-206ENST00000415068 SPHKAPQ2M3C7 1700 aa19.03■□□□□ 0.64
ZNF3-206ENST00000415068 NBPF8Q3BBV2 869 aa19.01■□□□□ 0.63
ZNF3-206ENST00000415068 SLC52A1Q9NWF4 448 aa19.01■□□□□ 0.63
ZNF3-206ENST00000415068 CEP152O94986 1710 aa19■□□□□ 0.63
ZNF3-206ENST00000415068 CAMSAP1Q5T5Y3 1602 aa18.98■□□□□ 0.63
ZNF3-206ENST00000415068 RPGRIP1LQ68CZ1 1315 aa18.97■□□□□ 0.63
ZNF3-206ENST00000415068 DCAF11Q8TEB1 546 aa18.96■□□□□ 0.63
ZNF3-206ENST00000415068 CLTCL1P53675 1640 aa18.94■□□□□ 0.62
ZNF3-206ENST00000415068 SIGLEC1Q9BZZ2 1709 aa18.93■□□□□ 0.62
ZNF3-206ENST00000415068 EIF4G2P78344 907 aaKnown RBP eCLIP18.91■□□□□ 0.62
ZNF3-206ENST00000415068 RGL3Q3MIN7 710 aa18.91■□□□□ 0.62
ZNF3-206ENST00000415068 PIK3C2BO00750 1634 aa18.91■□□□□ 0.62
ZNF3-206ENST00000415068 PRAG1Q86YV5 1406 aa18.91■□□□□ 0.62
ZNF3-206ENST00000415068 KIF1BO60333 1816 aa18.89■□□□□ 0.61
ZNF3-206ENST00000415068 ZMYM3Q14202 1370 aa18.89■□□□□ 0.61
ZNF3-206ENST00000415068 GPRASP1Q5JY77 1395 aa18.89■□□□□ 0.61
ZNF3-206ENST00000415068 RALGAPBQ86X10 1494 aa18.89■□□□□ 0.61
ZNF3-206ENST00000415068 IDI1Q13907 227 aa18.88■□□□□ 0.61
ZNF3-206ENST00000415068 KDM2AQ9Y2K7 1162 aa18.87■□□□□ 0.61
ZNF3-206ENST00000415068 ESF1Q9H501 851 aaKnown RBP18.86■□□□□ 0.61
ZNF3-206ENST00000415068 SYNMO15061 1565 aa18.85■□□□□ 0.61
ZNF3-206ENST00000415068 SPATA31D1Q6ZQQ2 1576 aa18.85■□□□□ 0.61
ZNF3-206ENST00000415068 ADGRB3O60242 1522 aa18.85■□□□□ 0.61
ZNF3-206ENST00000415068 ERVK-7P63135 1459 aa18.85■□□□□ 0.61
ZNF3-206ENST00000415068 ZFYVE9O95405 1425 aa18.85■□□□□ 0.61
ZNF3-206ENST00000415068 PREX1Q8TCU6 1659 aa18.85■□□□□ 0.61
ZNF3-206ENST00000415068 MYOM2P54296 1465 aa18.84■□□□□ 0.61
ZNF3-206ENST00000415068 DIEXFQ68CQ4 756 aaKnown RBP18.84■□□□□ 0.61
ZNF3-206ENST00000415068 MROH2AA6NES4 1674 aa18.84■□□□□ 0.61
ZNF3-206ENST00000415068 NRXN1Q9ULB1 1477 aa18.84■□□□□ 0.61
ZNF3-206ENST00000415068 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.61
ZNF3-206ENST00000415068 HSPA5P11021 654 aaKnown RBP18.83■□□□□ 0.6
ZNF3-206ENST00000415068 CLTCQ00610 1675 aaKnown RBP18.82■□□□□ 0.6
ZNF3-206ENST00000415068 CFAP65Q6ZU64 1925 aaKnown RBP18.82■□□□□ 0.6
ZNF3-206ENST00000415068 VGFO15240 615 aaPredicted RBP18.81■□□□□ 0.6
ZNF3-206ENST00000415068 FBXO31Q5XUX0 539 aaPredicted RBP18.81■□□□□ 0.6
ZNF3-206ENST00000415068 LAMC1P11047 1609 aa18.81■□□□□ 0.6
ZNF3-206ENST00000415068 TRPM1Q7Z4N2 1603 aa18.81■□□□□ 0.6
ZNF3-206ENST00000415068 UGGT1Q9NYU2 1555 aa18.8■□□□□ 0.6
ZNF3-206ENST00000415068 KIAA1210Q9ULL0 1709 aa18.8■□□□□ 0.6
ZNF3-206ENST00000415068 MLECQ14165 292 aa18.79■□□□□ 0.6
ZNF3-206ENST00000415068 IFT172Q9UG01 1749 aa18.78■□□□□ 0.6
ZNF3-206ENST00000415068 CARD11Q9BXL7 1154 aa18.78■□□□□ 0.6
ZNF3-206ENST00000415068 TMEM131LA2VDJ0 1609 aa18.77■□□□□ 0.6
ZNF3-206ENST00000415068 SLC24A1O60721 1099 aa18.76■□□□□ 0.59
ZNF3-206ENST00000415068 C14orf93Q9H972 538 aaKnown RBP18.76■□□□□ 0.59
ZNF3-206ENST00000415068 MADDQ8WXG6 1647 aa18.75■□□□□ 0.59
ZNF3-206ENST00000415068 NBPF1Q3BBV0 1214 aa18.75■□□□□ 0.59
ZNF3-206ENST00000415068 ROCK2O75116 1388 aaKnown RBP18.75■□□□□ 0.59
ZNF3-206ENST00000415068 KDM5AP29375 1690 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms