RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 GPR153Q6NV75 609 aa14.66□□□□□ -0.06
TRA2B-204ENST00000414862 LMOD2Q6P5Q4 547 aa14.66□□□□□ -0.06
TRA2B-204ENST00000414862 KHSRPQ92945 711 aaKnown RBP eCLIP14.66□□□□□ -0.065e-7■■□□□ 13.4
TRA2B-204ENST00000414862 DDX12PQ92771 950 aa14.64□□□□□ -0.07
TRA2B-204ENST00000414862 KDM4FA0A1W2PPD8 638 aa14.63□□□□□ -0.07
TRA2B-204ENST00000414862 NUDT7P0C024 238 aa14.63□□□□□ -0.07
TRA2B-204ENST00000414862 ARHGEF11O15085 1522 aa14.62□□□□□ -0.07
TRA2B-204ENST00000414862 TOP2AP11388 1531 aaKnown RBP14.61□□□□□ -0.07
TRA2B-204ENST00000414862 TPRNQ4KMQ1 711 aa14.6□□□□□ -0.07
TRA2B-204ENST00000414862 IFT140Q96RY7 1462 aa14.6□□□□□ -0.07
TRA2B-204ENST00000414862 HOXB1P14653 301 aaPredicted RBP14.57□□□□□ -0.08
TRA2B-204ENST00000414862 ZNF608Q9ULD9 1512 aaPredicted RBP14.56□□□□□ -0.08
TRA2B-204ENST00000414862 RBM26Q5T8P6 1007 aaKnown RBP14.56□□□□□ -0.08
TRA2B-204ENST00000414862 PRKCSHP14314 528 aaPredicted RBP14.55□□□□□ -0.08
TRA2B-204ENST00000414862 OSBPP22059 807 aa14.55□□□□□ -0.08
TRA2B-204ENST00000414862 PHF14O94880 888 aa14.54□□□□□ -0.08
TRA2B-204ENST00000414862 RSF1Q96T23 1441 aaPredicted RBP14.54□□□□□ -0.08
TRA2B-204ENST00000414862 PCDHGA10Q9Y5H3 936 aa14.52□□□□□ -0.09
TRA2B-204ENST00000414862 CYB5RLQ6IPT4 315 aa14.51□□□□□ -0.09
TRA2B-204ENST00000414862 JPH4Q96JJ6 628 aa14.51□□□□□ -0.09
TRA2B-204ENST00000414862 EPAS1Q99814 870 aa14.51□□□□□ -0.09
TRA2B-204ENST00000414862 LHX6Q9UPM6 363 aa14.51□□□□□ -0.09
TRA2B-204ENST00000414862 EIF4G3O43432 1585 aaKnown RBP14.5□□□□□ -0.09
TRA2B-204ENST00000414862 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
TRA2B-204ENST00000414862 FOSBP53539 338 aa14.49□□□□□ -0.09
TRA2B-204ENST00000414862 ZNF454Q8N9F8 522 aa14.49□□□□□ -0.09
TRA2B-204ENST00000414862 TOPBP1Q92547 1522 aa14.48□□□□□ -0.09
TRA2B-204ENST00000414862 ST18O60284 1047 aa14.48□□□□□ -0.09
TRA2B-204ENST00000414862 PRIM1P49642 420 aaKnown RBP14.48□□□□□ -0.09
TRA2B-204ENST00000414862 TYW1BQ6NUM6 668 aa14.48□□□□□ -0.09
TRA2B-204ENST00000414862 GPIHBP1Q8IV16 184 aa14.47□□□□□ -0.09
TRA2B-204ENST00000414862 ZC3H15Q8WU90 426 aaKnown RBP14.46□□□□□ -0.09
TRA2B-204ENST00000414862 FAM163AQ96GL9 167 aaPredicted RBP14.46□□□□□ -0.09
TRA2B-204ENST00000414862 ABCC8Q09428 1581 aa14.46□□□□□ -0.09
TRA2B-204ENST00000414862 ARAP1Q96P48 1450 aa14.45□□□□□ -0.1
TRA2B-204ENST00000414862 NUTM2FA1L443 756 aa14.45□□□□□ -0.1
TRA2B-204ENST00000414862 FBXW7Q969H0 707 aa14.45□□□□□ -0.1
TRA2B-204ENST00000414862 RBM33Q96EV2 1170 aaKnown RBP14.45□□□□□ -0.1
TRA2B-204ENST00000414862 EN1Q05925 392 aaPredicted RBP14.44□□□□□ -0.1
TRA2B-204ENST00000414862 PSDA5PKW4 1024 aaPredicted RBP14.43□□□□□ -0.1
TRA2B-204ENST00000414862 MAP3K7O43318 606 aa14.43□□□□□ -0.1
TRA2B-204ENST00000414862 ZDHHC16Q969W1 377 aa14.43□□□□□ -0.1
TRA2B-204ENST00000414862 PPP4R3BQ5MIZ7 849 aa14.41□□□□□ -0.1
TRA2B-204ENST00000414862 DNMBPQ6XZF7 1577 aa14.41□□□□□ -0.1
TRA2B-204ENST00000414862 CCDC88BA6NC98 1476 aa14.4□□□□□ -0.1
TRA2B-204ENST00000414862 CHD1O14646 1710 aa14.39□□□□□ -0.11
TRA2B-204ENST00000414862 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.114e-7■■■□□ 19.1
TRA2B-204ENST00000414862 MARVELD3Q96A59 401 aa14.38□□□□□ -0.11
TRA2B-204ENST00000414862 ADAM33Q9BZ11 813 aa14.38□□□□□ -0.11
TRA2B-204ENST00000414862 EMP3P54852 163 aa14.37□□□□□ -0.11
TRA2B-204ENST00000414862 ERBB3P21860 1342 aa14.37□□□□□ -0.11
TRA2B-204ENST00000414862 TSR1Q2NL82 804 aaKnown RBP14.36□□□□□ -0.11
TRA2B-204ENST00000414862 TARBP1Q13395 1621 aaKnown RBP14.35□□□□□ -0.11
TRA2B-204ENST00000414862 GPR37O15354 613 aa14.35□□□□□ -0.11
TRA2B-204ENST00000414862 ZMYND10O75800 440 aa14.35□□□□□ -0.11
TRA2B-204ENST00000414862 C6orf132Q5T0Z8 1188 aa14.35□□□□□ -0.11
TRA2B-204ENST00000414862 CDHR5Q9HBB8 845 aa14.35□□□□□ -0.11
TRA2B-204ENST00000414862 FCHSD2O94868 740 aa14.34□□□□□ -0.11
TRA2B-204ENST00000414862 POLA1P09884 1462 aaPredicted RBP14.32□□□□□ -0.12
TRA2B-204ENST00000414862 PTGDRQ13258 359 aa14.32□□□□□ -0.12
TRA2B-204ENST00000414862 VARS2Q5ST30 1063 aaKnown RBP14.32□□□□□ -0.12
TRA2B-204ENST00000414862 LCE2DQ5TA82 110 aaPredicted RBP14.31□□□□□ -0.12
TRA2B-204ENST00000414862 BARGINQ6ZT62 677 aa14.31□□□□□ -0.12
TRA2B-204ENST00000414862 BCL2L12Q9HB09 334 aa14.31□□□□□ -0.12
TRA2B-204ENST00000414862 NPDC1Q9NQX5 325 aaPredicted RBP14.3□□□□□ -0.12
TRA2B-204ENST00000414862 FAM205CA6NFA0 338 aa14.29□□□□□ -0.12
TRA2B-204ENST00000414862 HIC1Q14526 733 aa14.29□□□□□ -0.12
TRA2B-204ENST00000414862 SNAPC4Q5SXM2 1469 aa14.28□□□□□ -0.12
TRA2B-204ENST00000414862 GNPATO15228 680 aa14.27□□□□□ -0.13
TRA2B-204ENST00000414862 SYNJ1O43426 1573 aa14.26□□□□□ -0.13
TRA2B-204ENST00000414862 CLASP1Q7Z460 1538 aa14.26□□□□□ -0.13
TRA2B-204ENST00000414862 PTPREP23469 700 aa14.26□□□□□ -0.13
TRA2B-204ENST00000414862 KRI1Q8N9T8 703 aaKnown RBP14.26□□□□□ -0.13
TRA2B-204ENST00000414862 TDRD9Q8NDG6 1382 aaKnown RBP14.25□□□□□ -0.13
TRA2B-204ENST00000414862 CERKQ8TCT0 537 aa14.25□□□□□ -0.13
TRA2B-204ENST00000414862 WDR97A6NE52 1622 aa14.25□□□□□ -0.13
TRA2B-204ENST00000414862 RAD54L2Q9Y4B4 1467 aa14.25□□□□□ -0.13
TRA2B-204ENST00000414862 CHMP7Q8WUX9 453 aaPredicted RBP14.24□□□□□ -0.13
TRA2B-204ENST00000414862 SLC24A3Q9HC58 644 aa14.24□□□□□ -0.13
TRA2B-204ENST00000414862 MAGI1Q96QZ7 1491 aaPredicted RBP14.24□□□□□ -0.13
TRA2B-204ENST00000414862 SOGA1O94964 1423 aa14.24□□□□□ -0.13
TRA2B-204ENST00000414862 FECHP22830 423 aa14.22□□□□□ -0.13
TRA2B-204ENST00000414862 HS3ST6Q96QI5 342 aa14.22□□□□□ -0.13
TRA2B-204ENST00000414862 KCNK17Q96T54 332 aa14.22□□□□□ -0.13
TRA2B-204ENST00000414862 COL9A1P20849 921 aa14.21□□□□□ -0.13
TRA2B-204ENST00000414862 ZNF687Q8N1G0 1237 aa14.2□□□□□ -0.14
TRA2B-204ENST00000414862 KCNH8Q96L42 1107 aa14.2□□□□□ -0.14
TRA2B-204ENST00000414862 GRIN2BQ13224 1484 aa14.19□□□□□ -0.14
TRA2B-204ENST00000414862 POTEB3A0JP26 581 aa14.19□□□□□ -0.14
TRA2B-204ENST00000414862 PPP1R3GB7ZBB8 358 aa14.19□□□□□ -0.14
TRA2B-204ENST00000414862 POTEBQ6S5H4 581 aa14.19□□□□□ -0.14
TRA2B-204ENST00000414862 SYNJ2O15056 1496 aa14.18□□□□□ -0.14
TRA2B-204ENST00000414862 FGD5Q6ZNL6 1462 aa14.18□□□□□ -0.14
TRA2B-204ENST00000414862 MINK1Q8N4C8 1332 aaPredicted RBP14.18□□□□□ -0.14
TRA2B-204ENST00000414862 MAP2K5Q13163 448 aa14.18□□□□□ -0.14
TRA2B-204ENST00000414862 ARHGAP33O14559 1287 aa14.17□□□□□ -0.14
TRA2B-204ENST00000414862 PSEN2P49810 448 aa14.16□□□□□ -0.14
TRA2B-204ENST00000414862 PRSS12P56730 875 aa14.16□□□□□ -0.14
TRA2B-204ENST00000414862 POTEEQ6S8J3 1075 aa14.16□□□□□ -0.14
TRA2B-204ENST00000414862 AK7Q96M32 723 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms