RNA–Protein interactions for RNA: ENST00000413985.1

CRIM1-202, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-202ENST00000413985 RNF17Q9BXT8 1623 aaKnown RBP18.32■□□□□ 0.52
CRIM1-202ENST00000413985 NPHP4O75161 1426 aaPredicted RBP18.31■□□□□ 0.52
CRIM1-202ENST00000413985 TNRQ92752 1358 aa18.3■□□□□ 0.52
CRIM1-202ENST00000413985 ANKLE2Q86XL3 938 aa18.29■□□□□ 0.52
CRIM1-202ENST00000413985 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
CRIM1-202ENST00000413985 MED14O60244 1454 aa18.27■□□□□ 0.52
CRIM1-202ENST00000413985 DEPDC5O75140 1603 aa18.27■□□□□ 0.51
CRIM1-202ENST00000413985 GPATCH8Q9UKJ3 1502 aaKnown RBP18.25■□□□□ 0.51
CRIM1-202ENST00000413985 SYNMO15061 1565 aa18.25■□□□□ 0.51
CRIM1-202ENST00000413985 ADGBQ8N7X0 1667 aa18.25■□□□□ 0.51
CRIM1-202ENST00000413985 UGGT1Q9NYU2 1555 aa18.23■□□□□ 0.51
CRIM1-202ENST00000413985 UBTFP17480 764 aaKnown RBP18.23■□□□□ 0.51
CRIM1-202ENST00000413985 PZPP20742 1482 aa18.22■□□□□ 0.51
CRIM1-202ENST00000413985 CCDC18Q5T9S5 1454 aa18.21■□□□□ 0.51
CRIM1-202ENST00000413985 THEMISQ8N1K5 641 aaPredicted RBP18.2■□□□□ 0.5
CRIM1-202ENST00000413985 KIAA1107Q9UPP5 1409 aa18.2■□□□□ 0.5
CRIM1-202ENST00000413985 FAM135AQ9P2D6 1515 aa18.19■□□□□ 0.5
CRIM1-202ENST00000413985 XIRP1Q702N8 1843 aaKnown RBP18.19■□□□□ 0.5
CRIM1-202ENST00000413985 MIA2Q96PC5 1412 aa18.18■□□□□ 0.5
CRIM1-202ENST00000413985 KDM5DQ9BY66 1539 aa18.18■□□□□ 0.5
CRIM1-202ENST00000413985 CASKIN1Q8WXD9 1431 aa18.17■□□□□ 0.5
CRIM1-202ENST00000413985 ZC3H13Q5T200 1668 aaKnown RBP18.17■□□□□ 0.5
CRIM1-202ENST00000413985 NLRP1Q9C000 1473 aa18.16■□□□□ 0.5
CRIM1-202ENST00000413985 PLEKHH2Q8IVE3 1493 aa18.15■□□□□ 0.5
CRIM1-202ENST00000413985 CFDP1Q9UEE9 299 aaPredicted RBP18.15■□□□□ 0.5
CRIM1-202ENST00000413985 KIF3BO15066 747 aa18.14■□□□□ 0.49
CRIM1-202ENST00000413985 ZNF644Q9H582 1327 aaPredicted RBP18.14■□□□□ 0.49
CRIM1-202ENST00000413985 DHX29Q7Z478 1369 aaKnown RBP18.13■□□□□ 0.49
CRIM1-202ENST00000413985 UPF1Q92900 1129 aaKnown RBP eCLIP18.11■□□□□ 0.491e-10■■■■□ 21.2
CRIM1-202ENST00000413985 FAM135BQ49AJ0 1406 aa18.11■□□□□ 0.49
CRIM1-202ENST00000413985 MBD5Q9P267 1494 aa18.1■□□□□ 0.49
CRIM1-202ENST00000413985 WASHC2CQ9Y4E1 1318 aa18.1■□□□□ 0.49
CRIM1-202ENST00000413985 ROBO1Q9Y6N7 1651 aa18.09■□□□□ 0.49
CRIM1-202ENST00000413985 CCNB3Q8WWL7 1395 aa18.08■□□□□ 0.49
CRIM1-202ENST00000413985 RTEL1-TNFRSF6BF6WH68 1400 aa18.06■□□□□ 0.48
CRIM1-202ENST00000413985 FYCO1Q9BQS8 1478 aa18.05■□□□□ 0.48
CRIM1-202ENST00000413985 SCAF11Q99590 1463 aaKnown RBP18.04■□□□□ 0.48
CRIM1-202ENST00000413985 CHIC1Q5VXU3 224 aa18.04■□□□□ 0.48
CRIM1-202ENST00000413985 UBR1Q8IWV7 1749 aa18.03■□□□□ 0.48
CRIM1-202ENST00000413985 LTKP29376 864 aa18.03■□□□□ 0.48
CRIM1-202ENST00000413985 TIAM1Q13009 1591 aa18.03■□□□□ 0.48
CRIM1-202ENST00000413985 TRIM52Q96A61 297 aa18.02■□□□□ 0.48
CRIM1-202ENST00000413985 RBM33Q96EV2 1170 aaKnown RBP18.02■□□□□ 0.48
CRIM1-202ENST00000413985 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
CRIM1-202ENST00000413985 ERVK-7P63135 1459 aa18.01■□□□□ 0.47
CRIM1-202ENST00000413985 MAP3K1Q13233 1512 aa18■□□□□ 0.47
CRIM1-202ENST00000413985 TMEM94Q12767 1356 aa18■□□□□ 0.47
CRIM1-202ENST00000413985 ABCC3O15438 1527 aa17.98■□□□□ 0.47
CRIM1-202ENST00000413985 LRP6O75581 1613 aa17.98■□□□□ 0.47
CRIM1-202ENST00000413985 PHLPP1O60346 1717 aa17.98■□□□□ 0.47
CRIM1-202ENST00000413985 ARHGAP23Q9P227 1491 aa17.97■□□□□ 0.47
CRIM1-202ENST00000413985 TXNDC2Q86VQ3 553 aa17.97■□□□□ 0.47
CRIM1-202ENST00000413985 CFAP65Q6ZU64 1925 aaKnown RBP17.96■□□□□ 0.47
CRIM1-202ENST00000413985 SLIT1O75093 1534 aa17.95■□□□□ 0.46
CRIM1-202ENST00000413985 CCDC141Q6ZP82 1450 aa17.95■□□□□ 0.46
CRIM1-202ENST00000413985 MTUS2Q5JR59 1369 aa17.94■□□□□ 0.46
CRIM1-202ENST00000413985 JCADQ9P266 1359 aa17.94■□□□□ 0.46
CRIM1-202ENST00000413985 SRCAPQ6ZRS2 3230 aa17.94■□□□□ 0.46
CRIM1-202ENST00000413985 CEP152O94986 1710 aa17.92■□□□□ 0.46
CRIM1-202ENST00000413985 COL16A1Q07092 1604 aaPredicted RBP17.91■□□□□ 0.46
CRIM1-202ENST00000413985 LRRC9Q6ZRR7 1453 aa17.91■□□□□ 0.46
CRIM1-202ENST00000413985 MROH1Q8NDA8 1641 aa17.9■□□□□ 0.46
CRIM1-202ENST00000413985 CAMSAP2Q08AD1 1489 aa17.89■□□□□ 0.45
CRIM1-202ENST00000413985 PROSER2Q86WR7 435 aaPredicted RBP17.89■□□□□ 0.45
CRIM1-202ENST00000413985 MEX3CQ5U5Q3 659 aaKnown RBP17.88■□□□□ 0.45
CRIM1-202ENST00000413985 KCNA6P17658 529 aa17.87■□□□□ 0.45
CRIM1-202ENST00000413985 ZNF772Q68DY9 489 aaPredicted RBP17.87■□□□□ 0.45
CRIM1-202ENST00000413985 PRDM15P57071 1507 aaPredicted RBP17.87■□□□□ 0.45
CRIM1-202ENST00000413985 EID1Q9Y6B2 187 aa17.86■□□□□ 0.45
CRIM1-202ENST00000413985 PIK3C2BO00750 1634 aa17.86■□□□□ 0.45
CRIM1-202ENST00000413985 SLC26A8Q96RN1 970 aa17.85■□□□□ 0.45
CRIM1-202ENST00000413985 SLAIN2Q9P270 581 aa17.85■□□□□ 0.45
CRIM1-202ENST00000413985 EHBP1L1Q8N3D4 1523 aa17.84■□□□□ 0.45
CRIM1-202ENST00000413985 TMEM2Q9UHN6 1383 aa17.84■□□□□ 0.45
CRIM1-202ENST00000413985 RXRBP28702 533 aa17.84■□□□□ 0.45
CRIM1-202ENST00000413985 MSH6P52701 1360 aa17.83■□□□□ 0.45
CRIM1-202ENST00000413985 TET3O43151 1660 aa17.83■□□□□ 0.44
CRIM1-202ENST00000413985 NWD1Q149M9 1564 aa17.83■□□□□ 0.44
CRIM1-202ENST00000413985 CEP162Q5TB80 1403 aa17.82■□□□□ 0.44
CRIM1-202ENST00000413985 SPATA31A6Q5VVP1 1343 aa17.82■□□□□ 0.44
CRIM1-202ENST00000413985 NKTRP30414 1462 aaKnown RBP17.81■□□□□ 0.44
CRIM1-202ENST00000413985 CDK12Q9NYV4 1490 aaPredicted RBP17.8■□□□□ 0.44
CRIM1-202ENST00000413985 FGD6Q6ZV73 1430 aa17.8■□□□□ 0.44
CRIM1-202ENST00000413985 EIF2AK4Q9P2K8 1649 aaKnown RBP17.8■□□□□ 0.44
CRIM1-202ENST00000413985 ARHGEF5Q12774 1597 aa17.79■□□□□ 0.44
CRIM1-202ENST00000413985 SHPRHQ149N8 1683 aa17.79■□□□□ 0.44
CRIM1-202ENST00000413985 KDM5AP29375 1690 aaKnown RBP17.78■□□□□ 0.44
CRIM1-202ENST00000413985 RGS12O14924 1447 aa17.78■□□□□ 0.44
CRIM1-202ENST00000413985 RSPH4AQ5TD94 716 aa17.77■□□□□ 0.44
CRIM1-202ENST00000413985 NUTM2BA6NNL0 878 aaPredicted RBP17.76■□□□□ 0.43
CRIM1-202ENST00000413985 NUTM2EB1AL46 878 aaPredicted RBP17.76■□□□□ 0.43
CRIM1-202ENST00000413985 TSPY4P0CV99 314 aa17.76■□□□□ 0.43
CRIM1-202ENST00000413985 TSPY10P0CW01 314 aa17.76■□□□□ 0.43
CRIM1-202ENST00000413985 NUTM2AQ8IVF1 878 aaPredicted RBP17.76■□□□□ 0.43
CRIM1-202ENST00000413985 EFCAB6Q5THR3 1501 aa17.76■□□□□ 0.43
CRIM1-202ENST00000413985 STAG3Q9UJ98 1225 aa17.75■□□□□ 0.43
CRIM1-202ENST00000413985 AFF2P51816 1311 aa17.74■□□□□ 0.43
CRIM1-202ENST00000413985 AHDC1Q5TGY3 1603 aaPredicted RBP17.74■□□□□ 0.43
CRIM1-202ENST00000413985 MAST1Q9Y2H9 1570 aa17.74■□□□□ 0.43
CRIM1-202ENST00000413985 SETBP1Q9Y6X0 1596 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms