RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 GLMNQ92990 594 aa8.43□□□□□ -1.06
CBX1P3-201ENST00000413296 CRISPLD2Q9H0B8 497 aa8.43□□□□□ -1.06
CBX1P3-201ENST00000413296 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.43□□□□□ -1.06
CBX1P3-201ENST00000413296 KDM4AO75164 1064 aa8.42□□□□□ -1.06
CBX1P3-201ENST00000413296 CLSTN1O94985 981 aa8.42□□□□□ -1.06
CBX1P3-201ENST00000413296 NLRP6P59044 892 aa8.42□□□□□ -1.06
CBX1P3-201ENST00000413296 FBXO22Q8NEZ5 403 aa8.42□□□□□ -1.06
CBX1P3-201ENST00000413296 C8orf37Q96NL8 207 aa8.42□□□□□ -1.06
CBX1P3-201ENST00000413296 CARNS1A5YM72 827 aa8.41□□□□□ -1.06
CBX1P3-201ENST00000413296 BANK1Q8NDB2 785 aa8.41□□□□□ -1.06
CBX1P3-201ENST00000413296 BRPF3Q9ULD4 1205 aa8.41□□□□□ -1.06
CBX1P3-201ENST00000413296 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.4□□□□□ -1.06
CBX1P3-201ENST00000413296 TCF3P15923 654 aa8.4□□□□□ -1.06
CBX1P3-201ENST00000413296 VRTNQ9H8Y1 702 aa8.4□□□□□ -1.06
CBX1P3-201ENST00000413296 SNRKQ9NRH2 765 aa8.4□□□□□ -1.06
CBX1P3-201ENST00000413296 ANKRD62A6NC57 917 aa8.39□□□□□ -1.07
CBX1P3-201ENST00000413296 GNPATO15228 680 aa8.39□□□□□ -1.07
CBX1P3-201ENST00000413296 TXNDC2Q86VQ3 553 aa8.39□□□□□ -1.07
CBX1P3-201ENST00000413296 PROCA1Q8NCQ7 364 aaPredicted RBP8.39□□□□□ -1.07
CBX1P3-201ENST00000413296 NUTM2FA1L443 756 aa8.38□□□□□ -1.07
CBX1P3-201ENST00000413296 SPDYE16A6NNV3 312 aaPredicted RBP8.38□□□□□ -1.07
CBX1P3-201ENST00000413296 RFX1P22670 979 aa8.38□□□□□ -1.07
CBX1P3-201ENST00000413296 ERCC3P19447 782 aa8.37□□□□□ -1.07
CBX1P3-201ENST00000413296 NOL8Q76FK4 1167 aaKnown RBP8.37□□□□□ -1.07
CBX1P3-201ENST00000413296 UBXN4Q92575 508 aa8.37□□□□□ -1.07
CBX1P3-201ENST00000413296 POM121CA8CG34 1229 aa8.36□□□□□ -1.07
CBX1P3-201ENST00000413296 GDPD2Q9HCC8 539 aa8.36□□□□□ -1.07
CBX1P3-201ENST00000413296 GNEQ9Y223 722 aaKnown RBP8.36□□□□□ -1.07
CBX1P3-201ENST00000413296 ZC3H4Q9UPT8 1303 aaKnown RBP8.35□□□□□ -1.07
CBX1P3-201ENST00000413296 MNX1P50219 401 aaPredicted RBP8.35□□□□□ -1.07
CBX1P3-201ENST00000413296 PDIA6Q15084 440 aa8.35□□□□□ -1.07
CBX1P3-201ENST00000413296 HIRIP3Q9BW71 556 aaPredicted RBP8.35□□□□□ -1.07
CBX1P3-201ENST00000413296 REPIN1Q9BWE0 567 aaKnown RBP8.35□□□□□ -1.07
CBX1P3-201ENST00000413296 ZNF16P17020 682 aaPredicted RBP8.34□□□□□ -1.07
CBX1P3-201ENST00000413296 SRPK2P78362 688 aaKnown RBP8.34□□□□□ -1.07
CBX1P3-201ENST00000413296 ZNF526Q8TF50 670 aaPredicted RBP8.34□□□□□ -1.07
CBX1P3-201ENST00000413296 PPP1R1BQ9UD71 204 aaPredicted RBP8.34□□□□□ -1.07
CBX1P3-201ENST00000413296 PHF8Q9UPP1 1060 aa8.34□□□□□ -1.07
CBX1P3-201ENST00000413296 DPYSL4O14531 572 aa8.33□□□□□ -1.08
CBX1P3-201ENST00000413296 SOX12O15370 315 aa8.33□□□□□ -1.08
CBX1P3-201ENST00000413296 HIC1Q14526 733 aa8.33□□□□□ -1.08
CBX1P3-201ENST00000413296 SIRT1Q96EB6 747 aa8.33□□□□□ -1.08
CBX1P3-201ENST00000413296 POLR3EQ9NVU0 708 aa8.33□□□□□ -1.08
CBX1P3-201ENST00000413296 FECHP22830 423 aa8.32□□□□□ -1.08
CBX1P3-201ENST00000413296 ABL2P42684 1182 aa8.32□□□□□ -1.08
CBX1P3-201ENST00000413296 PSEN1P49768 467 aa8.32□□□□□ -1.08
CBX1P3-201ENST00000413296 ZC3H6P61129 1189 aaKnown RBP8.32□□□□□ -1.08
CBX1P3-201ENST00000413296 TMED8Q6PL24 325 aaPredicted RBP8.32□□□□□ -1.08
CBX1P3-201ENST00000413296 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.32□□□□□ -1.08
CBX1P3-201ENST00000413296 SF3A1Q15459 793 aaKnown RBP8.31□□□□□ -1.08
CBX1P3-201ENST00000413296 CFAP70Q5T0N1 1121 aa8.31□□□□□ -1.08
CBX1P3-201ENST00000413296 MARCH6O60337 910 aa8.3□□□□□ -1.08
CBX1P3-201ENST00000413296 RFC5P40937 340 aa8.3□□□□□ -1.08
CBX1P3-201ENST00000413296 DNAJC14Q6Y2X3 702 aaPredicted RBP8.3□□□□□ -1.08
CBX1P3-201ENST00000413296 EFCAB3Q8N7B9 438 aa8.3□□□□□ -1.08
CBX1P3-201ENST00000413296 PRM3Q9NNZ6 103 aa8.3□□□□□ -1.08
CBX1P3-201ENST00000413296 TMEM88BA6NKF7 163 aa8.29□□□□□ -1.08
CBX1P3-201ENST00000413296 FCHSD2O94868 740 aa8.29□□□□□ -1.08
CBX1P3-201ENST00000413296 NEFLP07196 543 aa8.29□□□□□ -1.08
CBX1P3-201ENST00000413296 TMEM259Q4ZIN3 620 aa8.29□□□□□ -1.08
CBX1P3-201ENST00000413296 B4GALNT3Q6L9W6 998 aa8.29□□□□□ -1.08
CBX1P3-201ENST00000413296 BCL2L13Q9BXK5 485 aa8.29□□□□□ -1.08
CBX1P3-201ENST00000413296 CREBZFQ9NS37 354 aa8.29□□□□□ -1.08
CBX1P3-201ENST00000413296 PCDHB8Q9UN66 801 aa8.29□□□□□ -1.08
CBX1P3-201ENST00000413296 PCDHB13Q9Y5F0 798 aa8.29□□□□□ -1.08
CBX1P3-201ENST00000413296 PLEKHD1A6NEE1 506 aa8.28□□□□□ -1.08
CBX1P3-201ENST00000413296 PRDM16Q9HAZ2 1276 aa8.28□□□□□ -1.08
CBX1P3-201ENST00000413296 CLCN1P35523 988 aa8.27□□□□□ -1.09
CBX1P3-201ENST00000413296 CACNB1Q02641 598 aaPredicted RBP8.27□□□□□ -1.09
CBX1P3-201ENST00000413296 HDGFL1Q5TGJ6 251 aa8.27□□□□□ -1.09
CBX1P3-201ENST00000413296 MTMR14Q8NCE2 650 aa8.27□□□□□ -1.09
CBX1P3-201ENST00000413296 LOC102724159A0A0B4J2E5 919 aa8.26□□□□□ -1.09
CBX1P3-201ENST00000413296 SSTR3P32745 418 aaPredicted RBP8.26□□□□□ -1.09
CBX1P3-201ENST00000413296 PWP2Q15269 919 aaKnown RBP8.26□□□□□ -1.09
CBX1P3-201ENST00000413296 NAALADL2Q58DX5 795 aa8.26□□□□□ -1.09
CBX1P3-201ENST00000413296 PPP1R15BQ5SWA1 713 aa8.26□□□□□ -1.09
CBX1P3-201ENST00000413296 CCER1Q8TC90 406 aaPredicted RBP8.26□□□□□ -1.09
CBX1P3-201ENST00000413296 GIPC2Q8TF65 315 aa8.26□□□□□ -1.09
CBX1P3-201ENST00000413296 TMUB1Q9BVT8 246 aa8.26□□□□□ -1.09
CBX1P3-201ENST00000413296 RIPOR2Q9Y4F9 1068 aa8.26□□□□□ -1.09
CBX1P3-201ENST00000413296 GRXCR2A6NFK2 248 aa8.25□□□□□ -1.09
CBX1P3-201ENST00000413296 GIMAP6Q6P9H5 292 aa8.25□□□□□ -1.09
CBX1P3-201ENST00000413296 BEGAINQ9BUH8 593 aa8.25□□□□□ -1.09
CBX1P3-201ENST00000413296 ABCC9O60706 1549 aa8.24□□□□□ -1.09
CBX1P3-201ENST00000413296 CLK2P49760 499 aaKnown RBP8.24□□□□□ -1.09
CBX1P3-201ENST00000413296 PPP1R12CQ9BZL4 782 aa8.24□□□□□ -1.09
CBX1P3-201ENST00000413296 GPCPD1Q9NPB8 672 aa8.24□□□□□ -1.09
CBX1P3-201ENST00000413296 EMILIN3Q9NT22 766 aa8.24□□□□□ -1.09
CBX1P3-201ENST00000413296 ATG7O95352 703 aa8.23□□□□□ -1.09
CBX1P3-201ENST00000413296 MYSM1Q5VVJ2 828 aa8.23□□□□□ -1.09
CBX1P3-201ENST00000413296 TBC1D2BQ9UPU7 963 aa8.23□□□□□ -1.09
CBX1P3-201ENST00000413296 VAMP1P23763 118 aa8.22□□□□□ -1.09
CBX1P3-201ENST00000413296 IRX6P78412 446 aaPredicted RBP8.22□□□□□ -1.09
CBX1P3-201ENST00000413296 MICAL1Q8TDZ2 1067 aa8.22□□□□□ -1.09
CBX1P3-201ENST00000413296 ADAMTS19Q8TE59 1207 aa8.22□□□□□ -1.09
CBX1P3-201ENST00000413296 CABP2Q9NPB3 220 aa8.22□□□□□ -1.09
CBX1P3-201ENST00000413296 SOCS7O14512 581 aa8.21□□□□□ -1.1
CBX1P3-201ENST00000413296 MDM2Q00987 491 aaPredicted RBP8.21□□□□□ -1.1
CBX1P3-201ENST00000413296 ZNF662Q6ZS27 426 aa8.21□□□□□ -1.1
CBX1P3-201ENST00000413296 MYH16Q9H6N6 1097 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 122.2 ms