RNA–Protein interactions for RNA: ENST00000411934.6

RPE-204, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-204ENST00000411934 ROCK1Q13464 1354 aa12.59□□□□□ -0.39
RPE-204ENST00000411934 KIF15Q9NS87 1388 aa12.58□□□□□ -0.4
RPE-204ENST00000411934 NCOA1Q15788 1441 aa12.58□□□□□ -0.4
RPE-204ENST00000411934 PTPRMP28827 1452 aa12.58□□□□□ -0.4
RPE-204ENST00000411934 RIMS1Q86UR5 1692 aaKnown RBP12.57□□□□□ -0.4
RPE-204ENST00000411934 FAM50AQ14320 339 aaKnown RBP12.57□□□□□ -0.4
RPE-204ENST00000411934 ZC3H13Q5T200 1668 aaKnown RBP12.57□□□□□ -0.4
RPE-204ENST00000411934 PRDM15P57071 1507 aaPredicted RBP12.56□□□□□ -0.4
RPE-204ENST00000411934 KDM5DQ9BY66 1539 aa12.56□□□□□ -0.4
RPE-204ENST00000411934 DEPDC5O75140 1603 aa12.55□□□□□ -0.4
RPE-204ENST00000411934 PTPRKQ15262 1439 aa12.53□□□□□ -0.4
RPE-204ENST00000411934 MROH1Q8NDA8 1641 aa12.52□□□□□ -0.4
RPE-204ENST00000411934 MAPK8IP2Q13387 824 aaPredicted RBP12.51□□□□□ -0.41
RPE-204ENST00000411934 PPARGC1BQ86YN6 1023 aaKnown RBP12.51□□□□□ -0.41
RPE-204ENST00000411934 ESF1Q9H501 851 aaKnown RBP12.51□□□□□ -0.41
RPE-204ENST00000411934 ANKRD50Q9ULJ7 1429 aa12.51□□□□□ -0.41
RPE-204ENST00000411934 C3P01024 1663 aa12.51□□□□□ -0.41
RPE-204ENST00000411934 KIF3BO15066 747 aa12.5□□□□□ -0.41
RPE-204ENST00000411934 NPATQ14207 1427 aa12.5□□□□□ -0.41
RPE-204ENST00000411934 VWDEQ8N2E2 1590 aa12.5□□□□□ -0.41
RPE-204ENST00000411934 CLTCQ00610 1675 aaKnown RBP12.5□□□□□ -0.41
RPE-204ENST00000411934 GCC2Q8IWJ2 1684 aa12.5□□□□□ -0.41
RPE-204ENST00000411934 UNC13BO14795 1591 aa12.49□□□□□ -0.41
RPE-204ENST00000411934 LMTK2Q8IWU2 1503 aa12.49□□□□□ -0.41
RPE-204ENST00000411934 MLECQ14165 292 aa12.49□□□□□ -0.41
RPE-204ENST00000411934 ABCC3O15438 1527 aa12.48□□□□□ -0.41
RPE-204ENST00000411934 RRP7BPQ9NSQ0 103 aa12.48□□□□□ -0.41
RPE-204ENST00000411934 PZPP20742 1482 aa12.47□□□□□ -0.41
RPE-204ENST00000411934 HFM1A2PYH4 1435 aa12.47□□□□□ -0.41
RPE-204ENST00000411934 KANK1Q14678 1352 aa12.47□□□□□ -0.41
RPE-204ENST00000411934 GGT6Q6P531 493 aa12.47□□□□□ -0.41
RPE-204ENST00000411934 CHIC2Q9UKJ5 165 aa12.47□□□□□ -0.41
RPE-204ENST00000411934 PREX1Q8TCU6 1659 aa12.47□□□□□ -0.41
RPE-204ENST00000411934 SETD1BQ9UPS6 1966 aaKnown RBP12.47□□□□□ -0.41
RPE-204ENST00000411934 ARHGAP31Q2M1Z3 1444 aa12.46□□□□□ -0.41
RPE-204ENST00000411934 ZMYM3Q14202 1370 aa12.45□□□□□ -0.42
RPE-204ENST00000411934 CAMSAP1Q5T5Y3 1602 aa12.45□□□□□ -0.42
RPE-204ENST00000411934 ACIN1Q9UKV3 1341 aaKnown RBP12.44□□□□□ -0.42
RPE-204ENST00000411934 WASHC2CQ9Y4E1 1318 aa12.44□□□□□ -0.42
RPE-204ENST00000411934 CEP152O94986 1710 aa12.44□□□□□ -0.42
RPE-204ENST00000411934 NAIPQ13075 1403 aa12.44□□□□□ -0.42
RPE-204ENST00000411934 ZNF142P52746 1687 aaPredicted RBP12.43□□□□□ -0.42
RPE-204ENST00000411934 RPRD2Q5VT52 1461 aaKnown RBP12.43□□□□□ -0.42
RPE-204ENST00000411934 IQGAP3Q86VI3 1631 aa12.43□□□□□ -0.42
RPE-204ENST00000411934 SPATA31D1Q6ZQQ2 1576 aa12.43□□□□□ -0.42
RPE-204ENST00000411934 EFCAB6Q5THR3 1501 aa12.42□□□□□ -0.42
RPE-204ENST00000411934 TET3O43151 1660 aa12.42□□□□□ -0.42
RPE-204ENST00000411934 UHRF1BP1Q6BDS2 1440 aa12.42□□□□□ -0.42
RPE-204ENST00000411934 LMTK3Q96Q04 1460 aa12.41□□□□□ -0.42
RPE-204ENST00000411934 MYO3AQ8NEV4 1616 aa12.4□□□□□ -0.42
RPE-204ENST00000411934 ITGAEP38570 1179 aa12.39□□□□□ -0.43
RPE-204ENST00000411934 ERVK-7P63135 1459 aa12.39□□□□□ -0.43
RPE-204ENST00000411934 NLRP1Q9C000 1473 aa12.39□□□□□ -0.43
RPE-204ENST00000411934 DCAF8L1A6NGE4 600 aa12.37□□□□□ -0.43
RPE-204ENST00000411934 CEP170BQ9Y4F5 1589 aaPredicted RBP12.37□□□□□ -0.43
RPE-204ENST00000411934 A2ML1A8K2U0 1454 aa12.36□□□□□ -0.43
RPE-204ENST00000411934 TNRQ92752 1358 aa12.36□□□□□ -0.43
RPE-204ENST00000411934 CEBPAP49715 358 aaPredicted RBP12.36□□□□□ -0.43
RPE-204ENST00000411934 KDM5AP29375 1690 aaKnown RBP12.35□□□□□ -0.43
RPE-204ENST00000411934 NOS1P29475 1434 aa12.35□□□□□ -0.43
RPE-204ENST00000411934 PLA2R1Q13018 1463 aa12.34□□□□□ -0.43
RPE-204ENST00000411934 SCAF1Q9H7N4 1312 aaKnown RBP12.34□□□□□ -0.43
RPE-204ENST00000411934 NUP155O75694 1391 aa12.33□□□□□ -0.44
RPE-204ENST00000411934 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.44
RPE-204ENST00000411934 SETD5Q9C0A6 1442 aa12.33□□□□□ -0.44
RPE-204ENST00000411934 E9PCH4 1651 aa12.32□□□□□ -0.44
RPE-204ENST00000411934 RNF39Q9H2S5 420 aa12.32□□□□□ -0.44
RPE-204ENST00000411934 HRCP23327 699 aa12.31□□□□□ -0.44
RPE-204ENST00000411934 SYNMO15061 1565 aa12.3□□□□□ -0.44
RPE-204ENST00000411934 UGGT1Q9NYU2 1555 aa12.3□□□□□ -0.44
RPE-204ENST00000411934 PIK3C2BO00750 1634 aa12.29□□□□□ -0.44
RPE-204ENST00000411934 SPHKAPQ2M3C7 1700 aa12.28□□□□□ -0.44
RPE-204ENST00000411934 FBXO31Q5XUX0 539 aaPredicted RBP12.28□□□□□ -0.44
RPE-204ENST00000411934 POTEHQ6S545 545 aa12.28□□□□□ -0.44
RPE-204ENST00000411934 SLC52A1Q9NWF4 448 aa12.28□□□□□ -0.44
RPE-204ENST00000411934 UBR1Q8IWV7 1749 aa12.28□□□□□ -0.44
RPE-204ENST00000411934 PTPRTO14522 1441 aa12.28□□□□□ -0.44
RPE-204ENST00000411934 TRPM2O94759 1503 aa12.27□□□□□ -0.44
RPE-204ENST00000411934 ADGRB3O60242 1522 aa12.27□□□□□ -0.45
RPE-204ENST00000411934 RAB3GAP2Q9H2M9 1393 aa12.26□□□□□ -0.45
RPE-204ENST00000411934 SLIT1O75093 1534 aa12.26□□□□□ -0.45
RPE-204ENST00000411934 POLR1AO95602 1720 aaPredicted RBP12.25□□□□□ -0.45
RPE-204ENST00000411934 PKD2Q13563 968 aa12.24□□□□□ -0.45
RPE-204ENST00000411934 CFAP65Q6ZU64 1925 aaKnown RBP12.24□□□□□ -0.45
RPE-204ENST00000411934 STRCQ7RTU9 1775 aa12.24□□□□□ -0.45
RPE-204ENST00000411934 THEMISQ8N1K5 641 aaPredicted RBP12.24□□□□□ -0.45
RPE-204ENST00000411934 ARHGAP23Q9P227 1491 aa12.24□□□□□ -0.45
RPE-204ENST00000411934 MED14O60244 1454 aa12.22□□□□□ -0.45
RPE-204ENST00000411934 HSPA2P54652 639 aa12.22□□□□□ -0.45
RPE-204ENST00000411934 TRIM52Q96A61 297 aa12.22□□□□□ -0.45
RPE-204ENST00000411934 SLC4A1APQ9BWU0 796 aaKnown RBP12.22□□□□□ -0.45
RPE-204ENST00000411934 TMEM131LA2VDJ0 1609 aa12.22□□□□□ -0.45
RPE-204ENST00000411934 NEURL4Q96JN8 1562 aa12.21□□□□□ -0.46
RPE-204ENST00000411934 TRIM26Q12899 539 aaPredicted RBP12.2□□□□□ -0.46
RPE-204ENST00000411934 IDI1Q13907 227 aa12.2□□□□□ -0.46
RPE-204ENST00000411934 SCAF11Q99590 1463 aaKnown RBP12.19□□□□□ -0.46
RPE-204ENST00000411934 CLTCL1P53675 1640 aa12.19□□□□□ -0.46
RPE-204ENST00000411934 TMEM2Q9UHN6 1383 aa12.18□□□□□ -0.46
RPE-204ENST00000411934 MPHOSPH9Q99550 1183 aa12.18□□□□□ -0.46
RPE-204ENST00000411934 KIF1BO60333 1816 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms