RNA–Protein interactions for RNA: ENST00000409886.3

RGPD3-202, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RGPD3, Length 5,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-202ENST00000409886 CDH23Q9H251 3354 aa4.94□□□□□ -1.62
RGPD3-202ENST00000409886 NWD1Q149M9 1564 aa4.94□□□□□ -1.62
RGPD3-202ENST00000409886 KDM5AP29375 1690 aaKnown RBP4.93□□□□□ -1.62
RGPD3-202ENST00000409886 UPF1Q92900 1129 aaKnown RBP eCLIP4.93□□□□□ -1.62
RGPD3-202ENST00000409886 CLTCQ00610 1675 aaKnown RBP4.93□□□□□ -1.62
RGPD3-202ENST00000409886 PHLPP1O60346 1717 aa4.93□□□□□ -1.62
RGPD3-202ENST00000409886 CARMIL1Q5VZK9 1371 aa4.93□□□□□ -1.62
RGPD3-202ENST00000409886 ADGBQ8N7X0 1667 aa4.93□□□□□ -1.62
RGPD3-202ENST00000409886 MSH5O43196 834 aa4.93□□□□□ -1.62
RGPD3-202ENST00000409886 FGD6Q6ZV73 1430 aa4.93□□□□□ -1.62
RGPD3-202ENST00000409886 ATP7AQ04656 1500 aa4.92□□□□□ -1.62
RGPD3-202ENST00000409886 DMDP11532 3685 aa4.92□□□□□ -1.62
RGPD3-202ENST00000409886 RAPGEF3O95398 923 aa4.92□□□□□ -1.62
RGPD3-202ENST00000409886 AHDC1Q5TGY3 1603 aaPredicted RBP4.91□□□□□ -1.62
RGPD3-202ENST00000409886 PRKCSHP14314 528 aaPredicted RBP4.91□□□□□ -1.62
RGPD3-202ENST00000409886 UNC13BO14795 1591 aa4.91□□□□□ -1.62
RGPD3-202ENST00000409886 COL16A1Q07092 1604 aaPredicted RBP4.91□□□□□ -1.62
RGPD3-202ENST00000409886 DIEXFQ68CQ4 756 aaKnown RBP4.91□□□□□ -1.62
RGPD3-202ENST00000409886 TSHZ2Q9NRE2 1034 aa4.91□□□□□ -1.62
RGPD3-202ENST00000409886 ROBO1Q9Y6N7 1651 aa4.91□□□□□ -1.62
RGPD3-202ENST00000409886 PLCH2O75038 1416 aa4.91□□□□□ -1.62
RGPD3-202ENST00000409886 PPP6R1Q9UPN7 881 aa4.9□□□□□ -1.62
RGPD3-202ENST00000409886 KIDINS220Q9ULH0 1771 aa4.9□□□□□ -1.62
RGPD3-202ENST00000409886 ZNF335Q9H4Z2 1342 aaPredicted RBP4.9□□□□□ -1.63
RGPD3-202ENST00000409886 CAMSAP2Q08AD1 1489 aa4.89□□□□□ -1.63
RGPD3-202ENST00000409886 PREX2Q70Z35 1606 aa4.89□□□□□ -1.63
RGPD3-202ENST00000409886 NLRP1Q9C000 1473 aa4.89□□□□□ -1.63
RGPD3-202ENST00000409886 ABCC1P33527 1531 aa4.89□□□□□ -1.63
RGPD3-202ENST00000409886 UNC80Q8N2C7 3258 aa4.88□□□□□ -1.63
RGPD3-202ENST00000409886 INO80Q9ULG1 1556 aaPredicted RBP4.88□□□□□ -1.63
RGPD3-202ENST00000409886 POTEAQ6S8J7 498 aa4.87□□□□□ -1.63
RGPD3-202ENST00000409886 DIP2AQ14689 1571 aa4.87□□□□□ -1.63
RGPD3-202ENST00000409886 ZNF772Q68DY9 489 aaPredicted RBP4.87□□□□□ -1.63
RGPD3-202ENST00000409886 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.87□□□□□ -1.63
RGPD3-202ENST00000409886 RANBP2P49792 3224 aaKnown RBP4.87□□□□□ -1.63
RGPD3-202ENST00000409886 LAMC1P11047 1609 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 SETBP1Q9Y6X0 1596 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 NPHP4O75161 1426 aaPredicted RBP4.86□□□□□ -1.63
RGPD3-202ENST00000409886 SPATA31A6Q5VVP1 1343 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 NUP153P49790 1475 aaKnown RBP4.86□□□□□ -1.63
RGPD3-202ENST00000409886 CCDC125Q86Z20 511 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 TIAM1Q13009 1591 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 PCDH10Q9P2E7 1040 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 NKTRP30414 1462 aaKnown RBP4.86□□□□□ -1.63
RGPD3-202ENST00000409886 ARHGAP23Q9P227 1491 aa4.86□□□□□ -1.63
RGPD3-202ENST00000409886 JCADQ9P266 1359 aa4.85□□□□□ -1.63
RGPD3-202ENST00000409886 SCAPERQ9BY12 1400 aa4.85□□□□□ -1.63
RGPD3-202ENST00000409886 PELP1Q8IZL8 1130 aaKnown RBP4.85□□□□□ -1.63
RGPD3-202ENST00000409886 ANO8Q9HCE9 1232 aaPredicted RBP4.85□□□□□ -1.63
RGPD3-202ENST00000409886 CDC42BPBQ9Y5S2 1711 aa4.85□□□□□ -1.63
RGPD3-202ENST00000409886 ATAD2Q6PL18 1390 aa4.85□□□□□ -1.63
RGPD3-202ENST00000409886 NCOA3Q9Y6Q9 1424 aa4.85□□□□□ -1.63
RGPD3-202ENST00000409886 MROH1Q8NDA8 1641 aa4.84□□□□□ -1.63
RGPD3-202ENST00000409886 MAP3K1Q13233 1512 aa4.84□□□□□ -1.63
RGPD3-202ENST00000409886 PZPP20742 1482 aa4.84□□□□□ -1.63
RGPD3-202ENST00000409886 SUPT16HQ9Y5B9 1047 aaKnown RBP4.84□□□□□ -1.63
RGPD3-202ENST00000409886 SLIT1O75093 1534 aa4.84□□□□□ -1.64
RGPD3-202ENST00000409886 UBR1Q8IWV7 1749 aa4.83□□□□□ -1.64
RGPD3-202ENST00000409886 NCKAP5LQ9HCH0 1330 aa4.83□□□□□ -1.64
RGPD3-202ENST00000409886 ZRANB1Q9UGI0 708 aa4.83□□□□□ -1.64
RGPD3-202ENST00000409886 SAMD9LQ8IVG5 1584 aa4.82□□□□□ -1.64
RGPD3-202ENST00000409886 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.82□□□□□ -1.64
RGPD3-202ENST00000409886 ITGAEP38570 1179 aa4.82□□□□□ -1.64
RGPD3-202ENST00000409886 MARF1Q9Y4F3 1742 aaKnown RBP4.82□□□□□ -1.64
RGPD3-202ENST00000409886 UGGT1Q9NYU2 1555 aa4.82□□□□□ -1.64
RGPD3-202ENST00000409886 ZMYM3Q14202 1370 aa4.82□□□□□ -1.64
RGPD3-202ENST00000409886 RGS12O14924 1447 aa4.81□□□□□ -1.64
RGPD3-202ENST00000409886 COL22A1Q8NFW1 1626 aaPredicted RBP4.81□□□□□ -1.64
RGPD3-202ENST00000409886 BCANQ96GW7 911 aa4.81□□□□□ -1.64
RGPD3-202ENST00000409886 LRP6O75581 1613 aa4.81□□□□□ -1.64
RGPD3-202ENST00000409886 GPATCH8Q9UKJ3 1502 aaKnown RBP4.81□□□□□ -1.64
RGPD3-202ENST00000409886 RGPD1P0DJD0 1748 aa4.81□□□□□ -1.64
RGPD3-202ENST00000409886 ZFHX3Q15911 3703 aa4.81□□□□□ -1.64
RGPD3-202ENST00000409886 PTPN23Q9H3S7 1636 aa4.8□□□□□ -1.64
RGPD3-202ENST00000409886 EIF2AK4Q9P2K8 1649 aaKnown RBP4.8□□□□□ -1.64
RGPD3-202ENST00000409886 SLC34A2O95436 690 aa4.8□□□□□ -1.64
RGPD3-202ENST00000409886 PIP4K2BP78356 416 aa4.8□□□□□ -1.64
RGPD3-202ENST00000409886 HIRIP3Q9BW71 556 aaPredicted RBP4.8□□□□□ -1.64
RGPD3-202ENST00000409886 CCER1Q8TC90 406 aaPredicted RBP4.79□□□□□ -1.64
RGPD3-202ENST00000409886 BCL9LQ86UU0 1499 aa4.79□□□□□ -1.64
RGPD3-202ENST00000409886 PLEKHH2Q8IVE3 1493 aa4.79□□□□□ -1.64
RGPD3-202ENST00000409886 VIRMAQ69YN4 1812 aaKnown RBP4.79□□□□□ -1.64
RGPD3-202ENST00000409886 CCDC136Q96JN2 1154 aa4.79□□□□□ -1.64
RGPD3-202ENST00000409886 SPENQ96T58 3664 aaKnown RBP4.79□□□□□ -1.64
RGPD3-202ENST00000409886 PRDM15P57071 1507 aaPredicted RBP4.79□□□□□ -1.64
RGPD3-202ENST00000409886 C11orf95C9JLR9 678 aaPredicted RBP4.78□□□□□ -1.64
RGPD3-202ENST00000409886 CROCC2H7BZ55 1655 aa4.78□□□□□ -1.64
RGPD3-202ENST00000409886 CDC42BPAQ5VT25 1732 aa4.78□□□□□ -1.64
RGPD3-202ENST00000409886 CEBPAP49715 358 aaPredicted RBP4.78□□□□□ -1.64
RGPD3-202ENST00000409886 RBM33Q96EV2 1170 aaKnown RBP4.78□□□□□ -1.64
RGPD3-202ENST00000409886 ESF1Q9H501 851 aaKnown RBP4.78□□□□□ -1.64
RGPD3-202ENST00000409886 ARHGAP5Q13017 1502 aa4.78□□□□□ -1.64
RGPD3-202ENST00000409886 SENP3-EIF4A1A0A087X0R7 540 aa4.78□□□□□ -1.64
RGPD3-202ENST00000409886 PRXQ9BXM0 1461 aa4.77□□□□□ -1.65
RGPD3-202ENST00000409886 TNRQ92752 1358 aa4.77□□□□□ -1.65
RGPD3-202ENST00000409886 A0A0C4DFX4 3053 aa4.77□□□□□ -1.65
RGPD3-202ENST00000409886 DNAH12Q6ZR08 3092 aa4.77□□□□□ -1.65
RGPD3-202ENST00000409886 RXRBP28702 533 aa4.77□□□□□ -1.65
RGPD3-202ENST00000409886 SPEGQ15772 3267 aa4.77□□□□□ -1.65
RGPD3-202ENST00000409886 CHD2O14647 1828 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms