RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 ST20-MTHFSA0A0A6YYL1 179 aa20.55■□□□□ 0.88
LYSMD4-204ENST00000409796 DCAF11Q8TEB1 546 aa20.54■□□□□ 0.88
LYSMD4-204ENST00000409796 SENP3-EIF4A1A0A087X0R7 540 aa20.53■□□□□ 0.88
LYSMD4-204ENST00000409796 TMC1Q8TDI8 760 aa20.53■□□□□ 0.88
LYSMD4-204ENST00000409796 RNF123Q5XPI4 1314 aa20.52■□□□□ 0.88
LYSMD4-204ENST00000409796 CDC42BPBQ9Y5S2 1711 aa20.52■□□□□ 0.88
LYSMD4-204ENST00000409796 SAMD9LQ8IVG5 1584 aa20.51■□□□□ 0.87
LYSMD4-204ENST00000409796 E9PCH4 1651 aa20.51■□□□□ 0.87
LYSMD4-204ENST00000409796 CCDC141Q6ZP82 1450 aa20.49■□□□□ 0.87
LYSMD4-204ENST00000409796 FAM135AQ9P2D6 1515 aa20.49■□□□□ 0.87
LYSMD4-204ENST00000409796 PREX2Q70Z35 1606 aa20.48■□□□□ 0.87
LYSMD4-204ENST00000409796 ERICH6Q7L0X2 663 aa20.47■□□□□ 0.87
LYSMD4-204ENST00000409796 LRPPRCP42704 1394 aaKnown RBP20.46■□□□□ 0.87
LYSMD4-204ENST00000409796 MYBBP1AQ9BQG0 1328 aaKnown RBP20.46■□□□□ 0.87
LYSMD4-204ENST00000409796 BRD4O60885 1362 aaPredicted RBP20.45■□□□□ 0.86
LYSMD4-204ENST00000409796 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.86
LYSMD4-204ENST00000409796 PRKCSHP14314 528 aaPredicted RBP20.44■□□□□ 0.86
LYSMD4-204ENST00000409796 RALBP1Q15311 655 aa20.44■□□□□ 0.86
LYSMD4-204ENST00000409796 KTN1Q86UP2 1357 aaKnown RBP20.44■□□□□ 0.86
LYSMD4-204ENST00000409796 PRAG1Q86YV5 1406 aa20.42■□□□□ 0.86
LYSMD4-204ENST00000409796 CCDC144AA2RUR9 1427 aa20.41■□□□□ 0.86
LYSMD4-204ENST00000409796 CCDC136Q96JN2 1154 aa20.41■□□□□ 0.86
LYSMD4-204ENST00000409796 SYCP2Q9BX26 1530 aa20.4■□□□□ 0.86
LYSMD4-204ENST00000409796 RSPH4AQ5TD94 716 aa20.4■□□□□ 0.86
LYSMD4-204ENST00000409796 UNC13BO14795 1591 aa20.39■□□□□ 0.85
LYSMD4-204ENST00000409796 CHD1O14646 1710 aa20.39■□□□□ 0.85
LYSMD4-204ENST00000409796 RGL3Q3MIN7 710 aa20.39■□□□□ 0.85
LYSMD4-204ENST00000409796 PLA2R1Q13018 1463 aa20.38■□□□□ 0.85
LYSMD4-204ENST00000409796 NBPF1Q3BBV0 1214 aa20.38■□□□□ 0.85
LYSMD4-204ENST00000409796 TTC37Q6PGP7 1564 aa20.37■□□□□ 0.85
LYSMD4-204ENST00000409796 MAST1Q9Y2H9 1570 aa20.37■□□□□ 0.85
LYSMD4-204ENST00000409796 ARHGAP5Q13017 1502 aa20.36■□□□□ 0.85
LYSMD4-204ENST00000409796 A2MP01023 1474 aa20.36■□□□□ 0.85
LYSMD4-204ENST00000409796 PARD3Q8TEW0 1356 aa20.35■□□□□ 0.85
LYSMD4-204ENST00000409796 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.35■□□□□ 0.85
LYSMD4-204ENST00000409796 MYO5CQ9NQX4 1742 aa20.34■□□□□ 0.85
LYSMD4-204ENST00000409796 CYB5RLQ6IPT4 315 aa20.34■□□□□ 0.85
LYSMD4-204ENST00000409796 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.34■□□□□ 0.85
LYSMD4-204ENST00000409796 GPRASP1Q5JY77 1395 aa20.34■□□□□ 0.85
LYSMD4-204ENST00000409796 NLRP13Q86W25 1043 aa20.33■□□□□ 0.85
LYSMD4-204ENST00000409796 IQGAP3Q86VI3 1631 aa20.32■□□□□ 0.84
LYSMD4-204ENST00000409796 PER1O15534 1290 aaPredicted RBP20.32■□□□□ 0.84
LYSMD4-204ENST00000409796 LAMC1P11047 1609 aa20.32■□□□□ 0.84
LYSMD4-204ENST00000409796 COL17A1Q9UMD9 1497 aaPredicted RBP20.31■□□□□ 0.84
LYSMD4-204ENST00000409796 PRDM15P57071 1507 aaPredicted RBP20.31■□□□□ 0.84
LYSMD4-204ENST00000409796 PLEKHH2Q8IVE3 1493 aa20.31■□□□□ 0.84
LYSMD4-204ENST00000409796 PLXNC1O60486 1568 aa20.31■□□□□ 0.84
LYSMD4-204ENST00000409796 SALL2Q9Y467 1007 aaPredicted RBP20.3■□□□□ 0.84
LYSMD4-204ENST00000409796 RRP1P56182 461 aaKnown RBP20.3■□□□□ 0.84
LYSMD4-204ENST00000409796 DISP3Q9P2K9 1392 aa20.29■□□□□ 0.84
LYSMD4-204ENST00000409796 TESK2Q96S53 571 aa20.28■□□□□ 0.84
LYSMD4-204ENST00000409796 DEKP35659 375 aaKnown RBP20.27■□□□□ 0.84
LYSMD4-204ENST00000409796 EIF2AK4Q9P2K8 1649 aaKnown RBP20.26■□□□□ 0.83
LYSMD4-204ENST00000409796 RCAN3Q9UKA8 241 aa20.26■□□□□ 0.83
LYSMD4-204ENST00000409796 MYT1LQ9UL68 1186 aa20.26■□□□□ 0.83
LYSMD4-204ENST00000409796 NOP58Q9Y2X3 529 aaKnown RBP20.26■□□□□ 0.83
LYSMD4-204ENST00000409796 SHROOM2Q13796 1616 aa20.25■□□□□ 0.83
LYSMD4-204ENST00000409796 EXOC6Q8TAG9 804 aa20.25■□□□□ 0.83
LYSMD4-204ENST00000409796 ERBINQ96RT1 1412 aa20.24■□□□□ 0.83
LYSMD4-204ENST00000409796 CC2D1BQ5T0F9 858 aaKnown RBP20.24■□□□□ 0.83
LYSMD4-204ENST00000409796 DUOX2Q9NRD8 1548 aa20.24■□□□□ 0.83
LYSMD4-204ENST00000409796 PDE3BQ13370 1112 aa20.24■□□□□ 0.83
LYSMD4-204ENST00000409796 PANK3Q9H999 370 aa20.23■□□□□ 0.83
LYSMD4-204ENST00000409796 MAGI2Q86UL8 1455 aa20.23■□□□□ 0.83
LYSMD4-204ENST00000409796 PAK3O75914 559 aaPredicted RBP20.22■□□□□ 0.83
LYSMD4-204ENST00000409796 ERCC6L2Q5T890 1561 aa20.22■□□□□ 0.83
LYSMD4-204ENST00000409796 WASHC2CQ9Y4E1 1318 aa20.22■□□□□ 0.83
LYSMD4-204ENST00000409796 ATP10AO60312 1499 aa20.22■□□□□ 0.83
LYSMD4-204ENST00000409796 ABCC2Q92887 1545 aa20.22■□□□□ 0.83
LYSMD4-204ENST00000409796 CDCA7LQ96GN5 454 aa20.21■□□□□ 0.83
LYSMD4-204ENST00000409796 TMF1P82094 1093 aa20.2■□□□□ 0.82
LYSMD4-204ENST00000409796 RNF17Q9BXT8 1623 aaKnown RBP20.19■□□□□ 0.82
LYSMD4-204ENST00000409796 BLMP54132 1417 aaPredicted RBP20.18■□□□□ 0.82
LYSMD4-204ENST00000409796 TRHP20396 242 aaPredicted RBP20.18■□□□□ 0.82
LYSMD4-204ENST00000409796 ANP32AP39687 249 aaKnown RBP20.18■□□□□ 0.82
LYSMD4-204ENST00000409796 INSRP06213 1382 aa20.16■□□□□ 0.82
LYSMD4-204ENST00000409796 IPO9Q96P70 1041 aaKnown RBP20.16■□□□□ 0.82
LYSMD4-204ENST00000409796 ZMYM4Q5VZL5 1548 aa20.15■□□□□ 0.82
LYSMD4-204ENST00000409796 CLASP1Q7Z460 1538 aa20.15■□□□□ 0.82
LYSMD4-204ENST00000409796 PLCH2O75038 1416 aa20.15■□□□□ 0.82
LYSMD4-204ENST00000409796 ABCC1P33527 1531 aa20.12■□□□□ 0.81
LYSMD4-204ENST00000409796 TRAPPC8Q9Y2L5 1435 aa20.12■□□□□ 0.81
LYSMD4-204ENST00000409796 ZCCHC11Q5TAX3 1644 aaKnown RBP20.12■□□□□ 0.81
LYSMD4-204ENST00000409796 MADDQ8WXG6 1647 aa20.12■□□□□ 0.81
LYSMD4-204ENST00000409796 EFCAB2Q5VUJ9 269 aa20.11■□□□□ 0.81
LYSMD4-204ENST00000409796 IQGAP1P46940 1657 aa20.11■□□□□ 0.81
LYSMD4-204ENST00000409796 TCERG1O14776 1098 aaKnown RBP20.1■□□□□ 0.81
LYSMD4-204ENST00000409796 PLIN1O60240 522 aa20.1■□□□□ 0.81
LYSMD4-204ENST00000409796 WDR7Q9Y4E6 1490 aa20.1■□□□□ 0.81
LYSMD4-204ENST00000409796 NBR1Q14596 966 aa20.09■□□□□ 0.81
LYSMD4-204ENST00000409796 ZBTB47Q9UFB7 747 aaPredicted RBP20.08■□□□□ 0.8
LYSMD4-204ENST00000409796 SPHKAPQ2M3C7 1700 aa20.07■□□□□ 0.8
LYSMD4-204ENST00000409796 ADAMTS8Q9UP79 889 aa20.07■□□□□ 0.8
LYSMD4-204ENST00000409796 CEP152O94986 1710 aa20.06■□□□□ 0.8
LYSMD4-204ENST00000409796 TRPM2O94759 1503 aa20.05■□□□□ 0.8
LYSMD4-204ENST00000409796 CRBNQ96SW2 442 aa20.05■□□□□ 0.8
LYSMD4-204ENST00000409796 ANO8Q9HCE9 1232 aaPredicted RBP20.05■□□□□ 0.8
LYSMD4-204ENST00000409796 PDE4AP27815 886 aa20.04■□□□□ 0.8
LYSMD4-204ENST00000409796 PPP2R1AP30153 589 aa20.04■□□□□ 0.8
LYSMD4-204ENST00000409796 KNSTRNQ9Y448 316 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms