RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 ZMYM4Q5VZL5 1548 aa22.91■■□□□ 1.26
SHANK2-204ENST00000409530 SIN3AQ96ST3 1273 aa22.91■■□□□ 1.26
SHANK2-204ENST00000409530 DHX29Q7Z478 1369 aaKnown RBP22.89■■□□□ 1.26
SHANK2-204ENST00000409530 FAM135AQ9P2D6 1515 aa22.88■■□□□ 1.25
SHANK2-204ENST00000409530 EIF2AK4Q9P2K8 1649 aaKnown RBP22.87■■□□□ 1.25
SHANK2-204ENST00000409530 KDM5DQ9BY66 1539 aa22.85■■□□□ 1.25
SHANK2-204ENST00000409530 PKD2Q13563 968 aa22.85■■□□□ 1.25
SHANK2-204ENST00000409530 CLSPNQ9HAW4 1339 aa22.84■■□□□ 1.25
SHANK2-204ENST00000409530 IQGAP3Q86VI3 1631 aa22.84■■□□□ 1.25
SHANK2-204ENST00000409530 DEPDC5O75140 1603 aa22.83■■□□□ 1.25
SHANK2-204ENST00000409530 GGT6Q6P531 493 aa22.83■■□□□ 1.25
SHANK2-204ENST00000409530 MAGI2Q86UL8 1455 aa22.82■■□□□ 1.24
SHANK2-204ENST00000409530 ARHGEF40Q8TER5 1519 aa22.81■■□□□ 1.24
SHANK2-204ENST00000409530 MROH1Q8NDA8 1641 aa22.81■■□□□ 1.24
SHANK2-204ENST00000409530 CEP152O94986 1710 aa22.79■■□□□ 1.24
SHANK2-204ENST00000409530 SIGLEC1Q9BZZ2 1709 aa22.79■■□□□ 1.24
SHANK2-204ENST00000409530 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
SHANK2-204ENST00000409530 PRDM15P57071 1507 aaPredicted RBP22.78■■□□□ 1.24
SHANK2-204ENST00000409530 ATP10AO60312 1499 aa22.77■■□□□ 1.24
SHANK2-204ENST00000409530 KANK1Q14678 1352 aa22.77■■□□□ 1.24
SHANK2-204ENST00000409530 RNF17Q9BXT8 1623 aaKnown RBP22.77■■□□□ 1.24
SHANK2-204ENST00000409530 MLECQ14165 292 aa22.74■■□□□ 1.23
SHANK2-204ENST00000409530 E9PCH4 1651 aa22.72■■□□□ 1.23
SHANK2-204ENST00000409530 ANKRD30BQ9BXX2 1392 aa22.72■■□□□ 1.23
SHANK2-204ENST00000409530 BCORL1Q5H9F3 1711 aa22.71■■□□□ 1.23
SHANK2-204ENST00000409530 TET3O43151 1660 aa22.7■■□□□ 1.22
SHANK2-204ENST00000409530 TONSLQ96HA7 1378 aa22.7■■□□□ 1.22
SHANK2-204ENST00000409530 ARID4BQ4LE39 1312 aaPredicted RBP22.7■■□□□ 1.22
SHANK2-204ENST00000409530 VWDEQ8N2E2 1590 aa22.69■■□□□ 1.22
SHANK2-204ENST00000409530 WASHC2CQ9Y4E1 1318 aa22.68■■□□□ 1.22
SHANK2-204ENST00000409530 CFAP65Q6ZU64 1925 aaKnown RBP22.67■■□□□ 1.22
SHANK2-204ENST00000409530 REREQ9P2R6 1566 aa22.65■■□□□ 1.22
SHANK2-204ENST00000409530 ABCC3O15438 1527 aa22.65■■□□□ 1.22
SHANK2-204ENST00000409530 EFCAB6Q5THR3 1501 aa22.65■■□□□ 1.22
SHANK2-204ENST00000409530 CAMSAP1Q5T5Y3 1602 aa22.63■■□□□ 1.21
SHANK2-204ENST00000409530 SPHKAPQ2M3C7 1700 aa22.63■■□□□ 1.21
SHANK2-204ENST00000409530 RPRD2Q5VT52 1461 aaKnown RBP22.62■■□□□ 1.21
SHANK2-204ENST00000409530 CCDC144AA2RUR9 1427 aa22.6■■□□□ 1.21
SHANK2-204ENST00000409530 CLTCQ00610 1675 aaKnown RBP22.6■■□□□ 1.21
SHANK2-204ENST00000409530 AGLP35573 1532 aa22.59■■□□□ 1.21
SHANK2-204ENST00000409530 PLA2R1Q13018 1463 aa22.59■■□□□ 1.21
SHANK2-204ENST00000409530 ZC3H13Q5T200 1668 aaKnown RBP22.59■■□□□ 1.21
SHANK2-204ENST00000409530 UGGT1Q9NYU2 1555 aa22.58■■□□□ 1.2
SHANK2-204ENST00000409530 LMTK2Q8IWU2 1503 aa22.57■■□□□ 1.2
SHANK2-204ENST00000409530 NPATQ14207 1427 aa22.56■■□□□ 1.2
SHANK2-204ENST00000409530 L3MBTL2Q969R5 705 aa22.54■■□□□ 1.2
SHANK2-204ENST00000409530 CLTCL1P53675 1640 aa22.54■■□□□ 1.2
SHANK2-204ENST00000409530 TRPM2O94759 1503 aa22.53■■□□□ 1.2
SHANK2-204ENST00000409530 RGL3Q3MIN7 710 aa22.52■■□□□ 1.2
SHANK2-204ENST00000409530 ESF1Q9H501 851 aaKnown RBP22.52■■□□□ 1.2
SHANK2-204ENST00000409530 ZNF326Q5BKZ1 582 aaKnown RBP22.51■■□□□ 1.19
SHANK2-204ENST00000409530 PLPPR3Q6T4P5 718 aa22.51■■□□□ 1.19
SHANK2-204ENST00000409530 PTPRTO14522 1441 aa22.47■■□□□ 1.19
SHANK2-204ENST00000409530 KDM2AQ9Y2K7 1162 aa22.46■■□□□ 1.19
SHANK2-204ENST00000409530 PPP1R15AO75807 674 aaPredicted RBP22.46■■□□□ 1.19
SHANK2-204ENST00000409530 TIMELESSQ9UNS1 1208 aa22.46■■□□□ 1.19
SHANK2-204ENST00000409530 PREX1Q8TCU6 1659 aa22.46■■□□□ 1.19
SHANK2-204ENST00000409530 CHGAP10645 457 aaKnown RBP22.45■■□□□ 1.18
SHANK2-204ENST00000409530 FBXO31Q5XUX0 539 aaPredicted RBP22.45■■□□□ 1.18
SHANK2-204ENST00000409530 FER1L4A9Z1Z3 1794 aa22.44■■□□□ 1.18
SHANK2-204ENST00000409530 SYNMO15061 1565 aa22.44■■□□□ 1.18
SHANK2-204ENST00000409530 MROH2AA6NES4 1674 aa22.42■■□□□ 1.18
SHANK2-204ENST00000409530 DCAF11Q8TEB1 546 aa22.42■■□□□ 1.18
SHANK2-204ENST00000409530 KIF1BO60333 1816 aa22.42■■□□□ 1.18
SHANK2-204ENST00000409530 CNTLNQ9NXG0 1405 aa22.4■■□□□ 1.18
SHANK2-204ENST00000409530 ARHGAP31Q2M1Z3 1444 aa22.39■■□□□ 1.18
SHANK2-204ENST00000409530 NOS1P29475 1434 aa22.38■■□□□ 1.17
SHANK2-204ENST00000409530 ERVK-7P63135 1459 aa22.37■■□□□ 1.17
SHANK2-204ENST00000409530 NBPF8Q3BBV2 869 aa22.37■■□□□ 1.17
SHANK2-204ENST00000409530 PPP6R1Q9UPN7 881 aa22.36■■□□□ 1.17
SHANK2-204ENST00000409530 ZMYM3Q14202 1370 aa22.36■■□□□ 1.17
SHANK2-204ENST00000409530 MADDQ8WXG6 1647 aa22.36■■□□□ 1.17
SHANK2-204ENST00000409530 CEBPAP49715 358 aaPredicted RBP22.36■■□□□ 1.17
SHANK2-204ENST00000409530 SPATA31E1Q6ZUB1 1445 aa22.35■■□□□ 1.17
SHANK2-204ENST00000409530 RIMS1Q86UR5 1692 aaKnown RBP22.34■■□□□ 1.17
SHANK2-204ENST00000409530 PIK3C2BO00750 1634 aa22.33■■□□□ 1.17
SHANK2-204ENST00000409530 HIRIP3Q9BW71 556 aaPredicted RBP22.33■■□□□ 1.16
SHANK2-204ENST00000409530 MYO5BQ9ULV0 1848 aa22.33■■□□□ 1.16
SHANK2-204ENST00000409530 SENP3Q9H4L4 574 aaPredicted RBP22.32■■□□□ 1.16
SHANK2-204ENST00000409530 C3P01024 1663 aa22.32■■□□□ 1.16
SHANK2-204ENST00000409530 ADGRB3O60242 1522 aa22.31■■□□□ 1.16
SHANK2-204ENST00000409530 IDI1Q13907 227 aa22.3■■□□□ 1.16
SHANK2-204ENST00000409530 SPATA31D1Q6ZQQ2 1576 aa22.29■■□□□ 1.16
SHANK2-204ENST00000409530 NUTM2DQ5VT03 806 aaPredicted RBP22.29■■□□□ 1.16
SHANK2-204ENST00000409530 STAG3Q9UJ98 1225 aa22.27■■□□□ 1.16
SHANK2-204ENST00000409530 ZNF316A6NFI3 1004 aaPredicted RBP22.24■■□□□ 1.15
SHANK2-204ENST00000409530 PRAG1Q86YV5 1406 aa22.24■■□□□ 1.15
SHANK2-204ENST00000409530 IFT172Q9UG01 1749 aa22.24■■□□□ 1.15
SHANK2-204ENST00000409530 TNRQ92752 1358 aa22.23■■□□□ 1.15
SHANK2-204ENST00000409530 SLC52A1Q9NWF4 448 aa22.23■■□□□ 1.15
SHANK2-204ENST00000409530 TMEM131LA2VDJ0 1609 aa22.23■■□□□ 1.15
SHANK2-204ENST00000409530 ADAMTSL3P82987 1691 aa22.22■■□□□ 1.15
SHANK2-204ENST00000409530 PPLO60437 1756 aa22.22■■□□□ 1.15
SHANK2-204ENST00000409530 TRPM1Q7Z4N2 1603 aa22.21■■□□□ 1.15
SHANK2-204ENST00000409530 UHRF1BP1Q6BDS2 1440 aa22.2■■□□□ 1.15
SHANK2-204ENST00000409530 ROCK2O75116 1388 aaKnown RBP22.19■■□□□ 1.14
SHANK2-204ENST00000409530 RALGAPBQ86X10 1494 aa22.19■■□□□ 1.14
SHANK2-204ENST00000409530 NEURL4Q96JN8 1562 aa22.18■■□□□ 1.14
SHANK2-204ENST00000409530 ADGRF5Q8IZF2 1346 aa22.18■■□□□ 1.14
SHANK2-204ENST00000409530 NEXMIFQ5QGS0 1516 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms