RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 NCOA1Q15788 1441 aa29.1■■■□□ 2.25
PPM1B-207ENST00000409486 WASHC2CQ9Y4E1 1318 aa29.09■■■□□ 2.25
PPM1B-207ENST00000409486 RRBP1Q9P2E9 1410 aaKnown RBP29.08■■■□□ 2.25
PPM1B-207ENST00000409486 MROH2AA6NES4 1674 aa29.08■■■□□ 2.25
PPM1B-207ENST00000409486 ZMYM3Q14202 1370 aa29.07■■■□□ 2.24
PPM1B-207ENST00000409486 ADGRL2O95490 1459 aa29.07■■■□□ 2.24
PPM1B-207ENST00000409486 RNF17Q9BXT8 1623 aaKnown RBP29.06■■■□□ 2.24
PPM1B-207ENST00000409486 ERBINQ96RT1 1412 aa29.06■■■□□ 2.24
PPM1B-207ENST00000409486 KDM5DQ9BY66 1539 aa29.05■■■□□ 2.24
PPM1B-207ENST00000409486 CEP152O94986 1710 aa29.04■■■□□ 2.24
PPM1B-207ENST00000409486 MROH1Q8NDA8 1641 aa29.01■■■□□ 2.23
PPM1B-207ENST00000409486 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.01■■■□□ 2.23
PPM1B-207ENST00000409486 HSPA2P54652 639 aa29■■■□□ 2.23
PPM1B-207ENST00000409486 PREX1Q8TCU6 1659 aa29■■■□□ 2.23
PPM1B-207ENST00000409486 PPP6R1Q9UPN7 881 aa28.99■■■□□ 2.23
PPM1B-207ENST00000409486 LMTK3Q96Q04 1460 aa28.98■■■□□ 2.23
PPM1B-207ENST00000409486 ANKRD50Q9ULJ7 1429 aa28.98■■■□□ 2.23
PPM1B-207ENST00000409486 ABCC3O15438 1527 aa28.97■■■□□ 2.23
PPM1B-207ENST00000409486 FBXO31Q5XUX0 539 aaPredicted RBP28.94■■■□□ 2.22
PPM1B-207ENST00000409486 CFAP65Q6ZU64 1925 aaKnown RBP28.94■■■□□ 2.22
PPM1B-207ENST00000409486 UHRF1BP1Q6BDS2 1440 aa28.93■■■□□ 2.22
PPM1B-207ENST00000409486 ZC3H13Q5T200 1668 aaKnown RBP28.93■■■□□ 2.22
PPM1B-207ENST00000409486 ROCK1Q13464 1354 aa28.93■■■□□ 2.22
PPM1B-207ENST00000409486 KANK1Q14678 1352 aa28.93■■■□□ 2.22
PPM1B-207ENST00000409486 PRDM15P57071 1507 aaPredicted RBP28.92■■■□□ 2.22
PPM1B-207ENST00000409486 DEPDC5O75140 1603 aa28.91■■■□□ 2.22
PPM1B-207ENST00000409486 CAMSAP1Q5T5Y3 1602 aa28.91■■■□□ 2.22
PPM1B-207ENST00000409486 FAM135AQ9P2D6 1515 aa28.89■■■□□ 2.21
PPM1B-207ENST00000409486 SETD1BQ9UPS6 1966 aaKnown RBP28.88■■■□□ 2.21
PPM1B-207ENST00000409486 MYO3AQ8NEV4 1616 aa28.87■■■□□ 2.21
PPM1B-207ENST00000409486 PZPP20742 1482 aa28.86■■■□□ 2.21
PPM1B-207ENST00000409486 NPATQ14207 1427 aa28.86■■■□□ 2.21
PPM1B-207ENST00000409486 TNRQ92752 1358 aa28.82■■■□□ 2.2
PPM1B-207ENST00000409486 GCC2Q8IWJ2 1684 aa28.79■■■□□ 2.2
PPM1B-207ENST00000409486 UNC13BO14795 1591 aa28.79■■■□□ 2.2
PPM1B-207ENST00000409486 VWDEQ8N2E2 1590 aa28.76■■■□□ 2.19
PPM1B-207ENST00000409486 CEP170BQ9Y4F5 1589 aaPredicted RBP28.76■■■□□ 2.19
PPM1B-207ENST00000409486 NAIPQ13075 1403 aa28.76■■■□□ 2.19
PPM1B-207ENST00000409486 ERVK-7P63135 1459 aa28.75■■■□□ 2.19
PPM1B-207ENST00000409486 NUP155O75694 1391 aa28.74■■■□□ 2.19
PPM1B-207ENST00000409486 ZNF142P52746 1687 aaPredicted RBP28.72■■■□□ 2.19
PPM1B-207ENST00000409486 EFCAB6Q5THR3 1501 aa28.71■■■□□ 2.19
PPM1B-207ENST00000409486 TRIM52Q96A61 297 aa28.71■■■□□ 2.19
PPM1B-207ENST00000409486 LMTK2Q8IWU2 1503 aa28.71■■■□□ 2.19
PPM1B-207ENST00000409486 SPATA31D1Q6ZQQ2 1576 aa28.7■■■□□ 2.19
PPM1B-207ENST00000409486 TET3O43151 1660 aa28.69■■■□□ 2.18
PPM1B-207ENST00000409486 HFM1A2PYH4 1435 aa28.69■■■□□ 2.18
PPM1B-207ENST00000409486 A2ML1A8K2U0 1454 aa28.68■■■□□ 2.18
PPM1B-207ENST00000409486 IQGAP3Q86VI3 1631 aa28.68■■■□□ 2.18
PPM1B-207ENST00000409486 ARHGAP31Q2M1Z3 1444 aa28.66■■■□□ 2.18
PPM1B-207ENST00000409486 STRCQ7RTU9 1775 aa28.65■■■□□ 2.18
PPM1B-207ENST00000409486 NCKAP5LQ9HCH0 1330 aa28.63■■■□□ 2.17
PPM1B-207ENST00000409486 E9PCH4 1651 aa28.63■■■□□ 2.17
PPM1B-207ENST00000409486 NLRP1Q9C000 1473 aa28.63■■■□□ 2.17
PPM1B-207ENST00000409486 UGGT1Q9NYU2 1555 aa28.61■■■□□ 2.17
PPM1B-207ENST00000409486 STAG3Q9UJ98 1225 aa28.59■■■□□ 2.17
PPM1B-207ENST00000409486 SYNMO15061 1565 aa28.59■■■□□ 2.17
PPM1B-207ENST00000409486 PIK3C2BO00750 1634 aa28.57■■■□□ 2.16
PPM1B-207ENST00000409486 UBR1Q8IWV7 1749 aa28.53■■■□□ 2.16
PPM1B-207ENST00000409486 RPRD2Q5VT52 1461 aaKnown RBP28.53■■■□□ 2.16
PPM1B-207ENST00000409486 THEMISQ8N1K5 641 aaPredicted RBP28.53■■■□□ 2.16
PPM1B-207ENST00000409486 CHGAP10645 457 aaKnown RBP28.52■■■□□ 2.16
PPM1B-207ENST00000409486 IDI1Q13907 227 aa28.52■■■□□ 2.16
PPM1B-207ENST00000409486 NOS1P29475 1434 aa28.52■■■□□ 2.16
PPM1B-207ENST00000409486 SETD5Q9C0A6 1442 aa28.51■■■□□ 2.15
PPM1B-207ENST00000409486 POLR1AO95602 1720 aaPredicted RBP28.5■■■□□ 2.15
PPM1B-207ENST00000409486 SLC4A1APQ9BWU0 796 aaKnown RBP28.49■■■□□ 2.15
PPM1B-207ENST00000409486 PLA2R1Q13018 1463 aa28.48■■■□□ 2.15
PPM1B-207ENST00000409486 DMRT2Q9Y5R5 561 aa28.47■■■□□ 2.15
PPM1B-207ENST00000409486 SENP3Q9H4L4 574 aaPredicted RBP28.46■■■□□ 2.15
PPM1B-207ENST00000409486 SPHKAPQ2M3C7 1700 aa28.46■■■□□ 2.15
PPM1B-207ENST00000409486 PKD2Q13563 968 aa28.46■■■□□ 2.15
PPM1B-207ENST00000409486 FOXD1Q16676 465 aa28.45■■■□□ 2.14
PPM1B-207ENST00000409486 ANKLE2Q86XL3 938 aa28.45■■■□□ 2.14
PPM1B-207ENST00000409486 RAB3GAP2Q9H2M9 1393 aa28.45■■■□□ 2.14
PPM1B-207ENST00000409486 MYO5BQ9ULV0 1848 aa28.44■■■□□ 2.14
PPM1B-207ENST00000409486 ADGRB3O60242 1522 aa28.42■■■□□ 2.14
PPM1B-207ENST00000409486 SLC52A1Q9NWF4 448 aa28.41■■■□□ 2.14
PPM1B-207ENST00000409486 NEURL4Q96JN8 1562 aa28.4■■■□□ 2.14
PPM1B-207ENST00000409486 PTPRTO14522 1441 aa28.38■■■□□ 2.13
PPM1B-207ENST00000409486 TXNDC2Q86VQ3 553 aa28.38■■■□□ 2.13
PPM1B-207ENST00000409486 MPHOSPH9Q99550 1183 aa28.35■■■□□ 2.13
PPM1B-207ENST00000409486 EID1Q9Y6B2 187 aa28.35■■■□□ 2.13
PPM1B-207ENST00000409486 NUTM2DQ5VT03 806 aaPredicted RBP28.34■■■□□ 2.13
PPM1B-207ENST00000409486 NPHP4O75161 1426 aaPredicted RBP28.34■■■□□ 2.13
PPM1B-207ENST00000409486 LTKP29376 864 aa28.34■■■□□ 2.13
PPM1B-207ENST00000409486 TMEM2Q9UHN6 1383 aa28.33■■■□□ 2.13
PPM1B-207ENST00000409486 TMEM131LA2VDJ0 1609 aa28.33■■■□□ 2.13
PPM1B-207ENST00000409486 BCANQ96GW7 911 aa28.33■■■□□ 2.13
PPM1B-207ENST00000409486 SCAF11Q99590 1463 aaKnown RBP28.33■■■□□ 2.13
PPM1B-207ENST00000409486 IQGAP1P46940 1657 aa28.33■■■□□ 2.13
PPM1B-207ENST00000409486 CLTCL1P53675 1640 aa28.32■■■□□ 2.12
PPM1B-207ENST00000409486 KDM5AP29375 1690 aaKnown RBP28.32■■■□□ 2.12
PPM1B-207ENST00000409486 SLIT1O75093 1534 aa28.31■■■□□ 2.12
PPM1B-207ENST00000409486 ZNF335Q9H4Z2 1342 aaPredicted RBP28.31■■■□□ 2.12
PPM1B-207ENST00000409486 TRPM2O94759 1503 aa28.29■■■□□ 2.12
PPM1B-207ENST00000409486 PPP1R15AO75807 674 aaPredicted RBP28.29■■■□□ 2.12
PPM1B-207ENST00000409486 ZNF326Q5BKZ1 582 aaKnown RBP28.29■■■□□ 2.12
PPM1B-207ENST00000409486 ARHGAP23Q9P227 1491 aa28.29■■■□□ 2.12
PPM1B-207ENST00000409486 RIMS2Q9UQ26 1411 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms