RNA–Protein interactions for RNA: ENST00000408684.1

SNORD88.1-201, humanhuman

BASIC

Gene SNORD88, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88.1-201ENST00000408684 TRIM44Q96DX7 344 aaPredicted RBP3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 RRP7BPQ9NSQ0 103 aa3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 FANCD2Q9BXW9 1451 aa3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 MBD5Q9P267 1494 aa3.64□□□□□ -1.83
SNORD88.1-201ENST00000408684 PARD3Q8TEW0 1356 aa3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 DNMT1P26358 1616 aaKnown RBP3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 ADGRL2O95490 1459 aa3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 TMF1P82094 1093 aa3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 GOLGA2Q08379 1002 aa3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 PDE3AQ14432 1141 aa3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 CCDC184Q52MB2 194 aa3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 PKNOX2Q96KN3 472 aa3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 PDCL3Q9H2J4 239 aa3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 CHMP4BQ9H444 224 aaKnown RBP3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 MYH16Q9H6N6 1097 aa3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 EPRSP07814 1512 aaKnown RBP3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 CENPJQ9HC77 1338 aaPredicted RBP3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 KDM5CP41229 1560 aa3.63□□□□□ -1.83
SNORD88.1-201ENST00000408684 BLMP54132 1417 aaPredicted RBP3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 NUP160Q12769 1436 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 SCAPERQ9BY12 1400 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 POLA1P09884 1462 aaPredicted RBP3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 SHANK2Q9UPX8 1470 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 TOPBP1Q92547 1522 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 E9PSI1 815 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 GOLGA6L22H0YM25 854 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 TSPY4P0CV99 314 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 TSPY10P0CW01 314 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 NBPF8Q3BBV2 869 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 RTN4Q9NQC3 1192 aaKnown RBP3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 KDM2BQ8NHM5 1336 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 NESP48681 1621 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 NPC1L1Q9UHC9 1359 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 ITSN2Q9NZM3 1697 aa3.62□□□□□ -1.83
SNORD88.1-201ENST00000408684 ABCC5O15440 1437 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 PDS5BQ9NTI5 1447 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 CLASP1Q7Z460 1538 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 LAMC3Q9Y6N6 1575 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 CT47B1P0C2W7 299 aaPredicted RBP3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 HS1BP3Q53T59 392 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 KLHL34Q8N239 644 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 NAP1L5Q96NT1 182 aaPredicted RBP3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 GBP4Q96PP9 640 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 CRBNQ96SW2 442 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 POLR3GLQ9BT43 218 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 CHMP5Q9NZZ3 219 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 CFDP1Q9UEE9 299 aaPredicted RBP3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 CHIC2Q9UKJ5 165 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 BRPF3Q9ULD4 1205 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 CIZ1Q9ULV3 898 aaPredicted RBP3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 LAMC1P11047 1609 aa3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 EIF2AK4Q9P2K8 1649 aaKnown RBP3.61□□□□□ -1.83
SNORD88.1-201ENST00000408684 DENND4BO75064 1496 aaPredicted RBP3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 KDM5DQ9BY66 1539 aa3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 ADGBQ8N7X0 1667 aa3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 TNNT2P45379 298 aaPredicted RBP3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 PKD2Q13563 968 aa3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 CSPP1Q1MSJ5 1256 aa3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 C8orf34Q49A92 452 aa3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 RWDD1Q9H446 243 aaPredicted RBP3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 ZBTB4Q9P1Z0 1013 aaPredicted RBP3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 KNSTRNQ9Y448 316 aa3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 KIF16BQ96L93 1317 aa3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 GPRASP1Q5JY77 1395 aa3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 ANKRD50Q9ULJ7 1429 aa3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 NKTRP30414 1462 aaKnown RBP3.6□□□□□ -1.83
SNORD88.1-201ENST00000408684 IQGAP2Q13576 1575 aa3.59□□□□□ -1.83
SNORD88.1-201ENST00000408684 ST20-MTHFSA0A0A6YYL1 179 aa3.59□□□□□ -1.83
SNORD88.1-201ENST00000408684 FRAT2O75474 233 aaPredicted RBP3.59□□□□□ -1.83
SNORD88.1-201ENST00000408684 MSNP26038 577 aaKnown RBP3.59□□□□□ -1.83
SNORD88.1-201ENST00000408684 CANXP27824 592 aaKnown RBP3.59□□□□□ -1.83
SNORD88.1-201ENST00000408684 MCM5P33992 734 aa3.59□□□□□ -1.83
SNORD88.1-201ENST00000408684 CCDC173Q0VFZ6 552 aa3.59□□□□□ -1.83
SNORD88.1-201ENST00000408684 HSCBQ8IWL3 235 aa3.59□□□□□ -1.83
SNORD88.1-201ENST00000408684 PIK3C2GO75747 1445 aa3.59□□□□□ -1.84
SNORD88.1-201ENST00000408684 TROQ12816 1431 aaPredicted RBP3.59□□□□□ -1.84
SNORD88.1-201ENST00000408684 PZPP20742 1482 aa3.59□□□□□ -1.84
SNORD88.1-201ENST00000408684 WDR62O43379 1518 aa3.59□□□□□ -1.84
SNORD88.1-201ENST00000408684 FSD2A1L4K1 749 aa3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 ESPNB1AK53 854 aa3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 PER1O15534 1290 aaPredicted RBP3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 MCM4P33991 863 aa3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 CALD1Q05682 793 aaKnown RBP3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 SLFN5Q08AF3 891 aa3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 ZNF326Q5BKZ1 582 aaKnown RBP3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 VSIG10Q8N0Z9 540 aa3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 DCAF11Q8TEB1 546 aa3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 CLUAP1Q96AJ1 413 aa3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 NUP155O75694 1391 aa3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 IBTKQ9P2D0 1353 aaPredicted RBP3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 PTPRGP23470 1445 aa3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 CARMIL2Q6F5E8 1435 aa3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 KIAA0586Q9BVV6 1533 aa3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 E9PCH4 1651 aa3.58□□□□□ -1.84
SNORD88.1-201ENST00000408684 PLEKHD1A6NEE1 506 aa3.57□□□□□ -1.84
SNORD88.1-201ENST00000408684 TRAK2O60296 914 aa3.57□□□□□ -1.84
SNORD88.1-201ENST00000408684 TAF3Q5VWG9 929 aa3.57□□□□□ -1.84
SNORD88.1-201ENST00000408684 DUSP27Q5VZP5 1158 aa3.57□□□□□ -1.84
SNORD88.1-201ENST00000408684 CCDC141Q6ZP82 1450 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms