RNA–Protein interactions for RNA: ENST00000408541.1

RNU6ATAC11P-201, Transcript of RNA, U6atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU6ATAC11P, Length 125 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC11P-201ENST00000408541 CARMIL2Q6F5E8 1435 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 FOXN1O15353 648 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 TOM1O60784 492 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 COL9A3Q14050 684 aaPredicted RBP0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 NBPF14Q5TI25 921 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 NBPF15Q8N660 670 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 WHAMMQ8TF30 809 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ZNF526Q8TF50 670 aaPredicted RBP0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 LRRC4BQ9NT99 713 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ARIH1Q9Y4X5 557 aaPredicted RBP0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 MYO18BQ8IUG5 2567 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ABCA2Q9BZC7 2435 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 WDFY4Q6ZS81 3184 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 MKI67P46013 3256 aaKnown RBP0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 PTPRMP28827 1452 aa0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 HELZ2Q9BYK8 2649 aaKnown RBP0.67□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ERBB4Q15303 1308 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 FAT4Q6V0I7 4981 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 VWFP04275 2813 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ITPR3Q14573 2671 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ADAMTS7Q9UKP4 1686 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 HECTD1Q9ULT8 2610 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 AHNAK2Q8IVF2 5795 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 SOBPA7XYQ1 873 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ITGB8P26012 769 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 SOX10P56693 466 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 POU4F1Q01851 419 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 FAM69CQ0P6D2 419 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 R3HDM1Q15032 1099 aaKnown RBP0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ST3GAL2Q16842 350 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 POTEGQ6S5H5 508 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 PRR23BQ6ZRT6 265 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 KRTAP4-9Q9BYQ8 210 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 C5orf42Q9H799 3197 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 ATAD2Q6PL18 1390 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 FBN2P35556 2912 aa0.66□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 GPR179Q6PRD1 2367 aa0.65□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 PTPN13Q12923 2485 aa0.65□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 DOPEY1Q5JWR5 2465 aa0.65□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 GOLGB1Q14789 3259 aaKnown RBP0.65□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 REV3LO60673 3130 aa0.65□□□□□ -2.3
RNU6ATAC11P-201ENST00000408541 RNF213Q63HN8 5207 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 BDP1A6H8Y1 2624 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 WDR90Q96KV7 1748 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 TNFRSF10AO00220 468 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MAP3K13O43283 966 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 RANGAP1P46060 587 aaPredicted RBP0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CCR10P46092 362 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 EML3Q32P44 896 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LCE3BQ5TA77 95 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ZNF772Q68DY9 489 aaPredicted RBP0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ERMP1Q7Z2K6 904 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 DEFB132Q7Z7B7 95 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CCDC125Q86Z20 511 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 PIK3R5Q8WYR1 880 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 RBMXL1Q96E39 390 aaKnown RBP0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 REPIN1Q9BWE0 567 aaKnown RBP0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CDCA7Q9BWT1 371 aaPredicted RBP0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 COLQQ9Y215 455 aaPredicted RBP0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NAV2Q8IVL1 2488 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NINLQ9Y2I6 1382 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SETD2Q9BYW2 2564 aaPredicted RBP0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 BCL9LQ86UU0 1499 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 HERC2O95714 4834 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CACNA1BQ00975 2339 aa0.65□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CENPFP49454 3210 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 MUC3AQ02505 3323 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ATP10DQ9P241 1426 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ABCA12Q86UK0 2595 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ZFHX3Q15911 3703 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 COL24A1Q17RW2 1714 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SHANK3Q9BYB0 1731 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 KIF13AQ9H1H9 1805 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 RELNP78509 3460 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ASPMQ8IZT6 3477 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ST18O60284 1047 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ITGBL1O95965 494 aaPredicted RBP0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SNRPBP14678 240 aaKnown RBP0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CTCFP49711 727 aaPredicted RBP0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 EMID1Q96A84 441 aaPredicted RBP0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 AIDAQ96BJ3 306 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ZNF219Q9P2Y4 722 aaPredicted RBP0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 BAZ1BQ9UIG0 1483 aaKnown RBP0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 NBEAL2Q6ZNJ1 2754 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 BRCA2P51587 3418 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 PDE4DIPQ5VU43 2346 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ARHGEF40Q8TER5 1519 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 TOPBP1Q92547 1522 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 LRRC7Q96NW7 1537 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 RTEL1-TNFRSF6BF6WH68 1400 aa0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 ZNF335Q9H4Z2 1342 aaPredicted RBP0.64□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SPEGQ15772 3267 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CFAP54Q96N23 3096 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 FBN1P35555 2871 aaKnown RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 TENM4Q6N022 2769 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 HTTP42858 3142 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 SYNJ1O43426 1573 aa0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 THOC2Q8NI27 1593 aaKnown RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 CDK12Q9NYV4 1490 aaPredicted RBP0.63□□□□□ -2.31
RNU6ATAC11P-201ENST00000408541 DHX57Q6P158 1386 aaKnown RBP0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms