RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 E9PSI1 815 aa16.02■□□□□ 0.16
RNF43-201ENST00000407977 PRKRIP1Q9H875 184 aaPredicted RBP16.02■□□□□ 0.15
RNF43-201ENST00000407977 CHMP5Q9NZZ3 219 aa16.02■□□□□ 0.15
RNF43-201ENST00000407977 GOLGA6L19H0YKK7 550 aa16.01■□□□□ 0.15
RNF43-201ENST00000407977 A0A0U1RQG5 324 aaPredicted RBP16.01■□□□□ 0.15
RNF43-201ENST00000407977 FOXD4L1Q9NU39 408 aa16.01■□□□□ 0.15
RNF43-201ENST00000407977 SF3A1Q15459 793 aaKnown RBP15.99■□□□□ 0.15
RNF43-201ENST00000407977 DHX57Q6P158 1386 aaKnown RBP15.99■□□□□ 0.15
RNF43-201ENST00000407977 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
RNF43-201ENST00000407977 CLSTN1O94985 981 aa15.99■□□□□ 0.15
RNF43-201ENST00000407977 MTERF4Q7Z6M4 381 aaKnown RBP15.99■□□□□ 0.15
RNF43-201ENST00000407977 SAFB2Q14151 953 aaKnown RBP eCLIP15.98■□□□□ 0.15
RNF43-201ENST00000407977 BECN2A8MW95 431 aa15.98■□□□□ 0.15
RNF43-201ENST00000407977 RSPH4AQ5TD94 716 aa15.98■□□□□ 0.15
RNF43-201ENST00000407977 ZKSCAN2Q63HK3 967 aa15.98■□□□□ 0.15
RNF43-201ENST00000407977 EXOC6Q8TAG9 804 aa15.98■□□□□ 0.15
RNF43-201ENST00000407977 GORABQ5T7V8 394 aa15.98■□□□□ 0.15
RNF43-201ENST00000407977 MAP7D2Q96T17 732 aa15.98■□□□□ 0.15
RNF43-201ENST00000407977 AAMPQ13685 434 aa15.97■□□□□ 0.15
RNF43-201ENST00000407977 SOX12O15370 315 aa15.97■□□□□ 0.15
RNF43-201ENST00000407977 REC8O95072 547 aa15.96■□□□□ 0.15
RNF43-201ENST00000407977 FAM43AQ8N2R8 423 aa15.96■□□□□ 0.15
RNF43-201ENST00000407977 TEX35Q5T0J7 233 aa15.96■□□□□ 0.15
RNF43-201ENST00000407977 CCDC70Q6NSX1 233 aa15.96■□□□□ 0.15
RNF43-201ENST00000407977 ZNF771Q7L3S4 317 aaPredicted RBP15.96■□□□□ 0.15
RNF43-201ENST00000407977 CCDC146Q8IYE0 955 aa15.96■□□□□ 0.15
RNF43-201ENST00000407977 CARMIL2Q6F5E8 1435 aa15.95■□□□□ 0.14
RNF43-201ENST00000407977 TPM1P09493 284 aa15.95■□□□□ 0.14
RNF43-201ENST00000407977 TSR1Q2NL82 804 aaKnown RBP15.95■□□□□ 0.14
RNF43-201ENST00000407977 SLC4A3P48751 1232 aa15.94■□□□□ 0.14
RNF43-201ENST00000407977 CRBNQ96SW2 442 aa15.94■□□□□ 0.14
RNF43-201ENST00000407977 NOL8Q76FK4 1167 aaKnown RBP15.94■□□□□ 0.14
RNF43-201ENST00000407977 STK26Q9P289 416 aa15.94■□□□□ 0.14
RNF43-201ENST00000407977 H3BQV1 296 aa15.94■□□□□ 0.14
RNF43-201ENST00000407977 IFFO2Q5TF58 517 aa15.94■□□□□ 0.14
RNF43-201ENST00000407977 ISY1Q9ULR0 285 aaKnown RBP15.94■□□□□ 0.14
RNF43-201ENST00000407977 NUCB2P80303 420 aa15.93■□□□□ 0.14
RNF43-201ENST00000407977 RASSF8Q8NHQ8 419 aa15.93■□□□□ 0.14
RNF43-201ENST00000407977 SLC4A10Q6U841 1118 aa15.93■□□□□ 0.14
RNF43-201ENST00000407977 ANKRD45Q5TZF3 282 aa15.92■□□□□ 0.14
RNF43-201ENST00000407977 DDX19BQ9UMR2 479 aa15.92■□□□□ 0.14
RNF43-201ENST00000407977 EFCAB2Q5VUJ9 269 aa15.92■□□□□ 0.14
RNF43-201ENST00000407977 MRE11P49959 708 aa15.91■□□□□ 0.14
RNF43-201ENST00000407977 FAM184AQ8NB25 1140 aa15.91■□□□□ 0.14
RNF43-201ENST00000407977 CEP89Q96ST8 783 aa15.91■□□□□ 0.14
RNF43-201ENST00000407977 FAM13BQ9NYF5 915 aa15.9■□□□□ 0.14
RNF43-201ENST00000407977 CCDC88BA6NC98 1476 aa15.9■□□□□ 0.14
RNF43-201ENST00000407977 RUFY2Q8WXA3 655 aa15.9■□□□□ 0.14
RNF43-201ENST00000407977 CECR2Q9BXF3 1484 aa15.89■□□□□ 0.13
RNF43-201ENST00000407977 FOXD4L5Q5VV16 416 aaPredicted RBP15.89■□□□□ 0.13
RNF43-201ENST00000407977 FOXD4L4Q8WXT5 416 aaPredicted RBP15.89■□□□□ 0.13
RNF43-201ENST00000407977 TAF7LQ5H9L4 462 aa15.88■□□□□ 0.13
RNF43-201ENST00000407977 TPD52L1Q16890 204 aaPredicted RBP15.88■□□□□ 0.13
RNF43-201ENST00000407977 GGT6Q6P531 493 aa15.88■□□□□ 0.13
RNF43-201ENST00000407977 PANK3Q9H999 370 aa15.88■□□□□ 0.13
RNF43-201ENST00000407977 ST20-MTHFSA0A0A6YYL1 179 aa15.87■□□□□ 0.13
RNF43-201ENST00000407977 TPM2P07951 284 aa15.87■□□□□ 0.13
RNF43-201ENST00000407977 DIAPH3Q9NSV4 1193 aa15.87■□□□□ 0.13
RNF43-201ENST00000407977 CCDC18Q5T9S5 1454 aa15.87■□□□□ 0.13
RNF43-201ENST00000407977 PLIN1O60240 522 aa15.87■□□□□ 0.13
RNF43-201ENST00000407977 ARGLU1Q9NWB6 273 aaPredicted RBP15.87■□□□□ 0.13
RNF43-201ENST00000407977 NFKBIBQ15653 356 aa15.86■□□□□ 0.13
RNF43-201ENST00000407977 CCAR2Q8N163 923 aaKnown RBP15.86■□□□□ 0.13
RNF43-201ENST00000407977 COG6Q9Y2V7 657 aa15.86■□□□□ 0.13
RNF43-201ENST00000407977 ZKSCAN1P17029 563 aaPredicted RBP15.86■□□□□ 0.13
RNF43-201ENST00000407977 LRRFIP1Q32MZ4 808 aaKnown RBP15.86■□□□□ 0.13
RNF43-201ENST00000407977 CPLX2Q6PUV4 134 aaKnown RBP15.86■□□□□ 0.13
RNF43-201ENST00000407977 IPO7O95373 1038 aaKnown RBP15.85■□□□□ 0.13
RNF43-201ENST00000407977 RILPL2Q969X0 211 aa15.85■□□□□ 0.13
RNF43-201ENST00000407977 CREBRFQ8IUR6 639 aa15.84■□□□□ 0.13
RNF43-201ENST00000407977 CHMP3Q9Y3E7 222 aa15.84■□□□□ 0.13
RNF43-201ENST00000407977 ROCK1Q13464 1354 aa15.84■□□□□ 0.13
RNF43-201ENST00000407977 UACAQ9BZF9 1416 aa15.84■□□□□ 0.13
RNF43-201ENST00000407977 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
RNF43-201ENST00000407977 ACBD3Q9H3P7 528 aa15.84■□□□□ 0.13
RNF43-201ENST00000407977 CCDC39Q9UFE4 941 aa15.84■□□□□ 0.13
RNF43-201ENST00000407977 NOM1Q5C9Z4 860 aaKnown RBP15.84■□□□□ 0.13
RNF43-201ENST00000407977 ZNF592Q92610 1267 aa15.84■□□□□ 0.13
RNF43-201ENST00000407977 API5Q9BZZ5 524 aaKnown RBP15.84■□□□□ 0.13
RNF43-201ENST00000407977 USP47Q96K76 1375 aa15.84■□□□□ 0.13
RNF43-201ENST00000407977 ANKRD20A12PQ8NF67 263 aa15.83■□□□□ 0.12
RNF43-201ENST00000407977 CCDC144AA2RUR9 1427 aa15.83■□□□□ 0.12
RNF43-201ENST00000407977 DZIP1LQ8IYY4 767 aaKnown RBP15.83■□□□□ 0.12
RNF43-201ENST00000407977 HOOK1Q9UJC3 728 aaKnown RBP15.83■□□□□ 0.12
RNF43-201ENST00000407977 INTS3Q68E01 1043 aaKnown RBP15.81■□□□□ 0.12
RNF43-201ENST00000407977 HOMER1Q86YM7 354 aa15.81■□□□□ 0.12
RNF43-201ENST00000407977 PAK3O75914 559 aaPredicted RBP15.8■□□□□ 0.12
RNF43-201ENST00000407977 CSB-PGBD3P0DP91 1061 aa15.8■□□□□ 0.12
RNF43-201ENST00000407977 C22orf23Q9BZE7 217 aa15.8■□□□□ 0.12
RNF43-201ENST00000407977 RAPGEF2Q9Y4G8 1499 aa15.8■□□□□ 0.12
RNF43-201ENST00000407977 PES1O00541 588 aaKnown RBP15.8■□□□□ 0.12
RNF43-201ENST00000407977 RRP7AQ9Y3A4 280 aaKnown RBP15.8■□□□□ 0.12
RNF43-201ENST00000407977 RNF20Q5VTR2 975 aa15.8■□□□□ 0.12
RNF43-201ENST00000407977 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
RNF43-201ENST00000407977 ERCC6Q03468 1493 aa15.79■□□□□ 0.12
RNF43-201ENST00000407977 BCL2L13Q9BXK5 485 aa15.79■□□□□ 0.12
RNF43-201ENST00000407977 NASPP49321 788 aaPredicted RBP15.79■□□□□ 0.12
RNF43-201ENST00000407977 SASS6Q6UVJ0 657 aa15.79■□□□□ 0.12
RNF43-201ENST00000407977 SYNE3Q6ZMZ3 975 aa15.79■□□□□ 0.12
RNF43-201ENST00000407977 APAF1O14727 1248 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms