RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 NPM2Q86SE8 214 aaKnown RBP15.87■□□□□ 0.13
PCNX4-204ENST00000406949 WDR43Q15061 677 aaKnown RBP eCLIP15.86■□□□□ 0.13
PCNX4-204ENST00000406949 SPATA31E1Q6ZUB1 1445 aa15.86■□□□□ 0.13
PCNX4-204ENST00000406949 NLRP13Q86W25 1043 aa15.86■□□□□ 0.13
PCNX4-204ENST00000406949 PNISRQ8TF01 805 aaKnown RBP15.86■□□□□ 0.13
PCNX4-204ENST00000406949 ADGRL2O95490 1459 aa15.86■□□□□ 0.13
PCNX4-204ENST00000406949 ERICH6BQ5W0A0 696 aa15.86■□□□□ 0.13
PCNX4-204ENST00000406949 ARID4BQ4LE39 1312 aaPredicted RBP15.85■□□□□ 0.13
PCNX4-204ENST00000406949 PLEKHH2Q8IVE3 1493 aa15.83■□□□□ 0.12
PCNX4-204ENST00000406949 SYCP2Q9BX26 1530 aa15.82■□□□□ 0.12
PCNX4-204ENST00000406949 ABCC10Q5T3U5 1492 aa15.82■□□□□ 0.12
PCNX4-204ENST00000406949 SLC24A1O60721 1099 aa15.82■□□□□ 0.12
PCNX4-204ENST00000406949 DHX29Q7Z478 1369 aaKnown RBP15.82■□□□□ 0.12
PCNX4-204ENST00000406949 ABCA8O94911 1581 aa15.81■□□□□ 0.12
PCNX4-204ENST00000406949 ADGBQ8N7X0 1667 aa15.8■□□□□ 0.12
PCNX4-204ENST00000406949 RCAN3Q9UKA8 241 aa15.8■□□□□ 0.12
PCNX4-204ENST00000406949 ANP32AP39687 249 aaKnown RBP15.79■□□□□ 0.12
PCNX4-204ENST00000406949 RALGAPBQ86X10 1494 aa15.79■□□□□ 0.12
PCNX4-204ENST00000406949 GGT6Q6P531 493 aa15.78■□□□□ 0.12
PCNX4-204ENST00000406949 SHANK2Q9UPX8 1470 aa15.78■□□□□ 0.12
PCNX4-204ENST00000406949 KANK1Q14678 1352 aa15.78■□□□□ 0.12
PCNX4-204ENST00000406949 FAM135AQ9P2D6 1515 aa15.78■□□□□ 0.12
PCNX4-204ENST00000406949 TNNT2P45379 298 aaPredicted RBP15.77■□□□□ 0.12
PCNX4-204ENST00000406949 CDCA7LQ96GN5 454 aa15.76■□□□□ 0.11
PCNX4-204ENST00000406949 MBD5Q9P267 1494 aa15.76■□□□□ 0.11
PCNX4-204ENST00000406949 BRD4O60885 1362 aaPredicted RBP15.76■□□□□ 0.11
PCNX4-204ENST00000406949 PLIN1O60240 522 aa15.76■□□□□ 0.11
PCNX4-204ENST00000406949 CDC42BPAQ5VT25 1732 aa15.76■□□□□ 0.11
PCNX4-204ENST00000406949 CDCA8Q53HL2 280 aa15.76■□□□□ 0.11
PCNX4-204ENST00000406949 NBR1Q14596 966 aa15.75■□□□□ 0.11
PCNX4-204ENST00000406949 EXOC6Q8TAG9 804 aa15.74■□□□□ 0.11
PCNX4-204ENST00000406949 SMG6Q86US8 1419 aaKnown RBP15.73■□□□□ 0.11
PCNX4-204ENST00000406949 DISP3Q9P2K9 1392 aa15.72■□□□□ 0.11
PCNX4-204ENST00000406949 RRP1P56182 461 aaKnown RBP15.72■□□□□ 0.11
PCNX4-204ENST00000406949 NUTM2DQ5VT03 806 aaPredicted RBP15.72■□□□□ 0.11
PCNX4-204ENST00000406949 PRAG1Q86YV5 1406 aa15.72■□□□□ 0.11
PCNX4-204ENST00000406949 CCDC146Q8IYE0 955 aa15.71■□□□□ 0.11
PCNX4-204ENST00000406949 UHRF1BP1Q6BDS2 1440 aa15.71■□□□□ 0.11
PCNX4-204ENST00000406949 ADCY10Q96PN6 1610 aa15.71■□□□□ 0.11
PCNX4-204ENST00000406949 SAMD9LQ8IVG5 1584 aa15.71■□□□□ 0.1
PCNX4-204ENST00000406949 BCORL1Q5H9F3 1711 aa15.7■□□□□ 0.1
PCNX4-204ENST00000406949 CANXP27824 592 aaKnown RBP15.7■□□□□ 0.1
PCNX4-204ENST00000406949 NEUROD2Q15784 382 aa15.7■□□□□ 0.1
PCNX4-204ENST00000406949 ERBINQ96RT1 1412 aa15.7■□□□□ 0.1
PCNX4-204ENST00000406949 SCAPERQ9BY12 1400 aa15.7■□□□□ 0.1
PCNX4-204ENST00000406949 TRAPPC8Q9Y2L5 1435 aa15.69■□□□□ 0.1
PCNX4-204ENST00000406949 ARHGEF12Q9NZN5 1544 aa15.69■□□□□ 0.1
PCNX4-204ENST00000406949 CFAP70Q5T0N1 1121 aa15.69■□□□□ 0.1
PCNX4-204ENST00000406949 MSH5O43196 834 aa15.68■□□□□ 0.1
PCNX4-204ENST00000406949 KDM5CP41229 1560 aa15.68■□□□□ 0.1
PCNX4-204ENST00000406949 SAFB2Q14151 953 aaKnown RBP eCLIP15.68■□□□□ 0.1
PCNX4-204ENST00000406949 ERCC6L2Q5T890 1561 aa15.68■□□□□ 0.1
PCNX4-204ENST00000406949 ADAMTS8Q9UP79 889 aa15.68■□□□□ 0.1
PCNX4-204ENST00000406949 CROCC2H7BZ55 1655 aa15.67■□□□□ 0.1
PCNX4-204ENST00000406949 TRAK1Q9UPV9 953 aa15.67■□□□□ 0.1
PCNX4-204ENST00000406949 TESK2Q96S53 571 aa15.67■□□□□ 0.1
PCNX4-204ENST00000406949 TTC37Q6PGP7 1564 aa15.66■□□□□ 0.1
PCNX4-204ENST00000406949 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.66■□□□□ 0.1
PCNX4-204ENST00000406949 ZBTB47Q9UFB7 747 aaPredicted RBP15.66■□□□□ 0.1
PCNX4-204ENST00000406949 A2MP01023 1474 aa15.65■□□□□ 0.1
PCNX4-204ENST00000406949 PLCH2O75038 1416 aa15.65■□□□□ 0.1
PCNX4-204ENST00000406949 FANCIQ9NVI1 1328 aa15.65■□□□□ 0.1
PCNX4-204ENST00000406949 PDE3BQ13370 1112 aa15.65■□□□□ 0.1
PCNX4-204ENST00000406949 RTL5Q5HYW3 569 aaPredicted RBP15.65■□□□□ 0.1
PCNX4-204ENST00000406949 ARHGEF5Q12774 1597 aa15.64■□□□□ 0.1
PCNX4-204ENST00000406949 DAXXQ9UER7 740 aaPredicted RBP15.64■□□□□ 0.09
PCNX4-204ENST00000406949 ABCC2Q92887 1545 aa15.64■□□□□ 0.09
PCNX4-204ENST00000406949 CHD1O14646 1710 aa15.64■□□□□ 0.09
PCNX4-204ENST00000406949 NOP58Q9Y2X3 529 aaKnown RBP15.63■□□□□ 0.09
PCNX4-204ENST00000406949 PER1O15534 1290 aaPredicted RBP15.62■□□□□ 0.09
PCNX4-204ENST00000406949 PPP2R1AP30153 589 aa15.62■□□□□ 0.09
PCNX4-204ENST00000406949 EIF3AQ14152 1382 aaKnown RBP15.62■□□□□ 0.09
PCNX4-204ENST00000406949 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.61■□□□□ 0.09
PCNX4-204ENST00000406949 CRBNQ96SW2 442 aa15.61■□□□□ 0.09
PCNX4-204ENST00000406949 DUOX2Q9NRD8 1548 aa15.61■□□□□ 0.09
PCNX4-204ENST00000406949 PREX2Q70Z35 1606 aa15.61■□□□□ 0.09
PCNX4-204ENST00000406949 PLA2R1Q13018 1463 aa15.6■□□□□ 0.09
PCNX4-204ENST00000406949 STAG3Q9UJ98 1225 aa15.6■□□□□ 0.09
PCNX4-204ENST00000406949 WASHC2CQ9Y4E1 1318 aa15.6■□□□□ 0.09
PCNX4-204ENST00000406949 TMEM132EQ6IEE7 984 aa15.6■□□□□ 0.09
PCNX4-204ENST00000406949 STK26Q9P289 416 aa15.6■□□□□ 0.09
PCNX4-204ENST00000406949 CDC42BPBQ9Y5S2 1711 aa15.59■□□□□ 0.09
PCNX4-204ENST00000406949 APAF1O14727 1248 aa15.59■□□□□ 0.09
PCNX4-204ENST00000406949 MORC1Q86VD1 984 aa15.59■□□□□ 0.09
PCNX4-204ENST00000406949 PARD3Q8TEW0 1356 aa15.58■□□□□ 0.09
PCNX4-204ENST00000406949 GOLGA2Q08379 1002 aa15.58■□□□□ 0.08
PCNX4-204ENST00000406949 KDM5DQ9BY66 1539 aa15.57■□□□□ 0.08
PCNX4-204ENST00000406949 RGS3P49796 1198 aa15.57■□□□□ 0.08
PCNX4-204ENST00000406949 ADGRF5Q8IZF2 1346 aa15.56■□□□□ 0.08
PCNX4-204ENST00000406949 FANCAO15360 1455 aa15.56■□□□□ 0.08
PCNX4-204ENST00000406949 SKAP1Q86WV1 359 aa15.56■□□□□ 0.08
PCNX4-204ENST00000406949 FRAT1Q92837 279 aaPredicted RBP15.55■□□□□ 0.08
PCNX4-204ENST00000406949 RRP7AQ9Y3A4 280 aaKnown RBP15.55■□□□□ 0.08
PCNX4-204ENST00000406949 LRPPRCP42704 1394 aaKnown RBP15.55■□□□□ 0.08
PCNX4-204ENST00000406949 ADGRL1O94910 1474 aa15.55■□□□□ 0.08
PCNX4-204ENST00000406949 MYO5CQ9NQX4 1742 aa15.54■□□□□ 0.08
PCNX4-204ENST00000406949 COL17A1Q9UMD9 1497 aaPredicted RBP15.54■□□□□ 0.08
PCNX4-204ENST00000406949 OSCARQ8IYS5 282 aa15.53■□□□□ 0.08
PCNX4-204ENST00000406949 EIF5BO60841 1220 aaKnown RBP15.52■□□□□ 0.08
PCNX4-204ENST00000406949 LAS1LQ9Y4W2 734 aaKnown RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms