RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 KDM2BQ8NHM5 1336 aa5.84□□□□□ -1.47
HDGFP1-201ENST00000405943 MAPK8IP3Q9UPT6 1336 aa5.84□□□□□ -1.47
HDGFP1-201ENST00000405943 NGEFQ8N5V2 710 aa5.84□□□□□ -1.47
HDGFP1-201ENST00000405943 CFDP1Q9UEE9 299 aaPredicted RBP5.84□□□□□ -1.47
HDGFP1-201ENST00000405943 IQGAP2Q13576 1575 aa5.84□□□□□ -1.48
HDGFP1-201ENST00000405943 LRRIQ1Q96JM4 1722 aa5.83□□□□□ -1.48
HDGFP1-201ENST00000405943 ST20-MTHFSA0A0A6YYL1 179 aa5.83□□□□□ -1.48
HDGFP1-201ENST00000405943 AAMPQ13685 434 aa5.83□□□□□ -1.48
HDGFP1-201ENST00000405943 WDR43Q15061 677 aaKnown RBP eCLIP5.83□□□□□ -1.48
HDGFP1-201ENST00000405943 ANKRD50Q9ULJ7 1429 aa5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 ZMYM3Q14202 1370 aa5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 LAMC3Q9Y6N6 1575 aa5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 FRAT2O75474 233 aaPredicted RBP5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 TMF1P82094 1093 aa5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 GOLGA2Q08379 1002 aa5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 C8orf34Q49A92 452 aa5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 ISY1Q9ULR0 285 aaKnown RBP5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 CDK13Q14004 1512 aaKnown RBP5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 CAMSAP2Q08AD1 1489 aa5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 SHANK2Q9UPX8 1470 aa5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 BCORL1Q5H9F3 1711 aa5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 PDS5BQ9NTI5 1447 aa5.82□□□□□ -1.48
HDGFP1-201ENST00000405943 NUP155O75694 1391 aa5.81□□□□□ -1.48
HDGFP1-201ENST00000405943 GOLGA6L3A6NEY3 463 aa5.81□□□□□ -1.48
HDGFP1-201ENST00000405943 PLIN1O60240 522 aa5.81□□□□□ -1.48
HDGFP1-201ENST00000405943 CDCA8Q53HL2 280 aa5.81□□□□□ -1.48
HDGFP1-201ENST00000405943 DCAF11Q8TEB1 546 aa5.81□□□□□ -1.48
HDGFP1-201ENST00000405943 CDCA7LQ96GN5 454 aa5.81□□□□□ -1.48
HDGFP1-201ENST00000405943 PNNQ9H307 717 aaKnown RBP5.81□□□□□ -1.48
HDGFP1-201ENST00000405943 ADGBQ8N7X0 1667 aa5.81□□□□□ -1.48
HDGFP1-201ENST00000405943 ITSN2Q9NZM3 1697 aa5.81□□□□□ -1.48
HDGFP1-201ENST00000405943 CCDC144AA2RUR9 1427 aa5.81□□□□□ -1.48
HDGFP1-201ENST00000405943 TROQ12816 1431 aaPredicted RBP5.81□□□□□ -1.48
HDGFP1-201ENST00000405943 CGNL1Q0VF96 1302 aa5.8□□□□□ -1.48
HDGFP1-201ENST00000405943 URB2Q14146 1524 aaKnown RBP5.8□□□□□ -1.48
HDGFP1-201ENST00000405943 KDM5DQ9BY66 1539 aa5.8□□□□□ -1.48
HDGFP1-201ENST00000405943 RRP9O43818 475 aaKnown RBP5.8□□□□□ -1.48
HDGFP1-201ENST00000405943 HSP90AA1P07900 732 aaKnown RBP5.8□□□□□ -1.48
HDGFP1-201ENST00000405943 TSPY4P0CV99 314 aa5.8□□□□□ -1.48
HDGFP1-201ENST00000405943 TSPY10P0CW01 314 aa5.8□□□□□ -1.48
HDGFP1-201ENST00000405943 SLC4A3P48751 1232 aa5.8□□□□□ -1.48
HDGFP1-201ENST00000405943 ZNF644Q9H582 1327 aaPredicted RBP5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 E9PCH4 1651 aa5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 COL17A1Q9UMD9 1497 aaPredicted RBP5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 SENP3-EIF4A1A0A087X0R7 540 aa5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 PER1O15534 1290 aaPredicted RBP5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 SLC24A1O60721 1099 aa5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 PTMSP20962 102 aa5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 RGS3P49796 1198 aa5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 NAP1L5Q96NT1 182 aaPredicted RBP5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 KDM2AQ9Y2K7 1162 aa5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 KNSTRNQ9Y448 316 aa5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 NUP160Q12769 1436 aa5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 GPRASP1Q5JY77 1395 aa5.79□□□□□ -1.48
HDGFP1-201ENST00000405943 NUP153P49790 1475 aaKnown RBP5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 CANXP27824 592 aaKnown RBP5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 CLCN1P35523 988 aa5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 MRE11P49959 708 aa5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 PDE3AQ14432 1141 aa5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 HSP90AA2PQ14568 343 aaPredicted RBP5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 CC2D1BQ5T0F9 858 aaKnown RBP5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 RSPH4AQ5TD94 716 aa5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 DUSP27Q5VZP5 1158 aa5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 PRAG1Q86YV5 1406 aa5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 PMFBP1Q8TBY8 1022 aa5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 PKNOX2Q96KN3 472 aa5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 ERBINQ96RT1 1412 aa5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 CLASP1Q7Z460 1538 aa5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 KIAA0586Q9BVV6 1533 aa5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 GPATCH8Q9UKJ3 1502 aaKnown RBP5.78□□□□□ -1.48
HDGFP1-201ENST00000405943 CEP170Q5SW79 1584 aa5.77□□□□□ -1.49
HDGFP1-201ENST00000405943 PTPRGP23470 1445 aa5.77□□□□□ -1.49
HDGFP1-201ENST00000405943 C9orf84Q5VXU9 1444 aa5.77□□□□□ -1.49
HDGFP1-201ENST00000405943 ARID3CA6NKF2 412 aa5.77□□□□□ -1.49
HDGFP1-201ENST00000405943 E9PSI1 815 aa5.77□□□□□ -1.49
HDGFP1-201ENST00000405943 C20orf194Q5TEA3 1177 aa5.77□□□□□ -1.49
HDGFP1-201ENST00000405943 PANK3Q9H999 370 aa5.77□□□□□ -1.49
HDGFP1-201ENST00000405943 ZNF777Q9ULD5 760 aaPredicted RBP5.77□□□□□ -1.49
HDGFP1-201ENST00000405943 LAMC1P11047 1609 aa5.77□□□□□ -1.49
HDGFP1-201ENST00000405943 RAPGEF6Q8TEU7 1601 aa5.77□□□□□ -1.49
HDGFP1-201ENST00000405943 EIF2AK4Q9P2K8 1649 aaKnown RBP5.77□□□□□ -1.49
HDGFP1-201ENST00000405943 NKTRP30414 1462 aaKnown RBP5.77□□□□□ -1.49
HDGFP1-201ENST00000405943 ADAMTS12P58397 1594 aa5.76□□□□□ -1.49
HDGFP1-201ENST00000405943 ZNF608Q9ULD9 1512 aaPredicted RBP5.76□□□□□ -1.49
HDGFP1-201ENST00000405943 DDX11L8A8MPP1 907 aa5.76□□□□□ -1.49
HDGFP1-201ENST00000405943 SLFN5Q08AF3 891 aa5.76□□□□□ -1.49
HDGFP1-201ENST00000405943 TRIM44Q96DX7 344 aaPredicted RBP5.76□□□□□ -1.49
HDGFP1-201ENST00000405943 STAC3Q96MF2 364 aa5.76□□□□□ -1.49
HDGFP1-201ENST00000405943 ADAMTS8Q9UP79 889 aa5.76□□□□□ -1.49
HDGFP1-201ENST00000405943 KIAA0556O60303 1618 aa5.76□□□□□ -1.49
HDGFP1-201ENST00000405943 EIF4G3O43432 1585 aaKnown RBP5.76□□□□□ -1.49
HDGFP1-201ENST00000405943 CROCC2H7BZ55 1655 aa5.75□□□□□ -1.49
HDGFP1-201ENST00000405943 ZNF521Q96K83 1311 aa5.75□□□□□ -1.49
HDGFP1-201ENST00000405943 PLEKHD1A6NEE1 506 aa5.75□□□□□ -1.49
HDGFP1-201ENST00000405943 TPM2P07951 284 aa5.75□□□□□ -1.49
HDGFP1-201ENST00000405943 PPP2R1AP30153 589 aa5.75□□□□□ -1.49
HDGFP1-201ENST00000405943 ANP32BQ92688 251 aaKnown RBP5.75□□□□□ -1.49
HDGFP1-201ENST00000405943 CLUAP1Q96AJ1 413 aa5.75□□□□□ -1.49
HDGFP1-201ENST00000405943 RWDD1Q9H446 243 aaPredicted RBP5.75□□□□□ -1.49
HDGFP1-201ENST00000405943 CHMP5Q9NZZ3 219 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms