RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 NISCHQ9Y2I1 1504 aa8.54□□□□□ -1.04
HDGFP1-201ENST00000405943 HRCP23327 699 aa7.53□□□□□ -1.2
HDGFP1-201ENST00000405943 PELP1Q8IZL8 1130 aaKnown RBP7.42□□□□□ -1.22
HDGFP1-201ENST00000405943 SUPT5HO00267 1087 aaKnown RBP7.39□□□□□ -1.23
HDGFP1-201ENST00000405943 SHROOM4Q9ULL8 1493 aa7.38□□□□□ -1.23
HDGFP1-201ENST00000405943 CHIC1Q5VXU3 224 aa7.31□□□□□ -1.24
HDGFP1-201ENST00000405943 PCGF6Q9BYE7 350 aa7.31□□□□□ -1.24
HDGFP1-201ENST00000405943 DCAF1Q9Y4B6 1507 aa7.3□□□□□ -1.24
HDGFP1-201ENST00000405943 ZCCHC6Q5VYS8 1495 aaKnown RBP7.28□□□□□ -1.24
HDGFP1-201ENST00000405943 ZEB1P37275 1124 aaPredicted RBP7.27□□□□□ -1.25
HDGFP1-201ENST00000405943 MYO15BQ96JP2 1530 aa7.24□□□□□ -1.25
HDGFP1-201ENST00000405943 MYT1Q01538 1121 aa7.22□□□□□ -1.25
HDGFP1-201ENST00000405943 TRIM26Q12899 539 aaPredicted RBP7.21□□□□□ -1.26
HDGFP1-201ENST00000405943 PPARGC1BQ86YN6 1023 aaKnown RBP7.19□□□□□ -1.26
HDGFP1-201ENST00000405943 CCDC180Q9P1Z9 1646 aa7.18□□□□□ -1.26
HDGFP1-201ENST00000405943 LOC105371045A0A1W2PR82 267 aa7.03□□□□□ -1.28
HDGFP1-201ENST00000405943 DCAF8L2P0C7V8 631 aa7.01□□□□□ -1.29
HDGFP1-201ENST00000405943 SCAF1Q9H7N4 1312 aaKnown RBP7.01□□□□□ -1.29
HDGFP1-201ENST00000405943 CENPBP07199 599 aaPredicted RBP6.99□□□□□ -1.29
HDGFP1-201ENST00000405943 TRIM41Q8WV44 630 aa6.95□□□□□ -1.3
HDGFP1-201ENST00000405943 ACIN1Q9UKV3 1341 aaKnown RBP6.95□□□□□ -1.3
HDGFP1-201ENST00000405943 ABCC9O60706 1549 aa6.91□□□□□ -1.3
HDGFP1-201ENST00000405943 CCER1Q8TC90 406 aaPredicted RBP6.87□□□□□ -1.31
HDGFP1-201ENST00000405943 DIEXFQ68CQ4 756 aaKnown RBP6.85□□□□□ -1.31
HDGFP1-201ENST00000405943 RSF1Q96T23 1441 aaPredicted RBP6.84□□□□□ -1.31
HDGFP1-201ENST00000405943 RB1CC1Q8TDY2 1594 aa6.84□□□□□ -1.31
HDGFP1-201ENST00000405943 NEUROD1Q13562 356 aa6.84□□□□□ -1.31
HDGFP1-201ENST00000405943 GTF3C3Q9Y5Q9 886 aa6.84□□□□□ -1.31
HDGFP1-201ENST00000405943 FAM9AQ8IZU1 332 aaPredicted RBP6.81□□□□□ -1.32
HDGFP1-201ENST00000405943 CLSPNQ9HAW4 1339 aa6.77□□□□□ -1.32
HDGFP1-201ENST00000405943 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.77□□□□□ -1.33
HDGFP1-201ENST00000405943 TTBK1Q5TCY1 1321 aaPredicted RBP6.76□□□□□ -1.33
HDGFP1-201ENST00000405943 ZNF316A6NFI3 1004 aaPredicted RBP6.76□□□□□ -1.33
HDGFP1-201ENST00000405943 WRNQ14191 1432 aaPredicted RBP eCLIP6.75□□□□□ -1.33
HDGFP1-201ENST00000405943 SCRIBQ14160 1630 aa6.7□□□□□ -1.34
HDGFP1-201ENST00000405943 EEA1Q15075 1411 aa6.68□□□□□ -1.34
HDGFP1-201ENST00000405943 EHMT2Q96KQ7 1210 aa6.68□□□□□ -1.34
HDGFP1-201ENST00000405943 TNIKQ9UKE5 1360 aa6.66□□□□□ -1.34
HDGFP1-201ENST00000405943 YTHDC1Q96MU7 727 aaKnown RBP6.65□□□□□ -1.34
HDGFP1-201ENST00000405943 CEP162Q5TB80 1403 aa6.65□□□□□ -1.35
HDGFP1-201ENST00000405943 NACADO15069 1562 aa6.62□□□□□ -1.35
HDGFP1-201ENST00000405943 BAZ1AQ9NRL2 1556 aaPredicted RBP6.61□□□□□ -1.35
HDGFP1-201ENST00000405943 MIER1Q8N108 512 aa6.61□□□□□ -1.35
HDGFP1-201ENST00000405943 MROH2BQ7Z745 1585 aa6.61□□□□□ -1.35
HDGFP1-201ENST00000405943 GOLGA3Q08378 1498 aa6.59□□□□□ -1.36
HDGFP1-201ENST00000405943 CECR2Q9BXF3 1484 aa6.59□□□□□ -1.36
HDGFP1-201ENST00000405943 EIF4G1Q04637 1599 aaKnown RBP6.58□□□□□ -1.36
HDGFP1-201ENST00000405943 UBTFP17480 764 aaKnown RBP6.58□□□□□ -1.36
HDGFP1-201ENST00000405943 APLP2Q06481 763 aa6.58□□□□□ -1.36
HDGFP1-201ENST00000405943 CSRNP3Q8WYN3 585 aa6.58□□□□□ -1.36
HDGFP1-201ENST00000405943 ANP32EQ9BTT0 268 aa6.56□□□□□ -1.36
HDGFP1-201ENST00000405943 TOP2AP11388 1531 aaKnown RBP6.55□□□□□ -1.36
HDGFP1-201ENST00000405943 WIZO95785 1651 aa6.55□□□□□ -1.36
HDGFP1-201ENST00000405943 CCDC88BA6NC98 1476 aa6.54□□□□□ -1.36
HDGFP1-201ENST00000405943 SUPT16HQ9Y5B9 1047 aaKnown RBP6.54□□□□□ -1.36
HDGFP1-201ENST00000405943 CEP164Q9UPV0 1460 aa6.53□□□□□ -1.36
HDGFP1-201ENST00000405943 HNRNPUL2Q1KMD3 747 aaKnown RBP6.52□□□□□ -1.37
HDGFP1-201ENST00000405943 SOGA1O94964 1423 aa6.51□□□□□ -1.37
HDGFP1-201ENST00000405943 VPS8Q8N3P4 1428 aa6.51□□□□□ -1.37
HDGFP1-201ENST00000405943 CLIP1P30622 1438 aa6.5□□□□□ -1.37
HDGFP1-201ENST00000405943 ABCC8Q09428 1581 aa6.49□□□□□ -1.37
HDGFP1-201ENST00000405943 BAZ1BQ9UIG0 1483 aaKnown RBP6.49□□□□□ -1.37
HDGFP1-201ENST00000405943 KIF21BO75037 1637 aa6.49□□□□□ -1.37
HDGFP1-201ENST00000405943 TSHZ2Q9NRE2 1034 aa6.48□□□□□ -1.37
HDGFP1-201ENST00000405943 NEFLP07196 543 aa6.47□□□□□ -1.37
HDGFP1-201ENST00000405943 SMARCA2P51531 1590 aa6.47□□□□□ -1.37
HDGFP1-201ENST00000405943 BCL11AQ9H165 835 aa6.46□□□□□ -1.38
HDGFP1-201ENST00000405943 DHX57Q6P158 1386 aaKnown RBP6.44□□□□□ -1.38
HDGFP1-201ENST00000405943 SMARCA4P51532 1647 aa6.44□□□□□ -1.38
HDGFP1-201ENST00000405943 MYT1LQ9UL68 1186 aa6.44□□□□□ -1.38
HDGFP1-201ENST00000405943 RUSC2Q8N2Y8 1516 aa6.41□□□□□ -1.38
HDGFP1-201ENST00000405943 TIMELESSQ9UNS1 1208 aa6.4□□□□□ -1.38
HDGFP1-201ENST00000405943 CUX2O14529 1486 aa6.4□□□□□ -1.39
HDGFP1-201ENST00000405943 CCER2I3L3R5 266 aa6.38□□□□□ -1.39
HDGFP1-201ENST00000405943 FKBP8Q14318 412 aa6.38□□□□□ -1.39
HDGFP1-201ENST00000405943 ERICH6Q7L0X2 663 aa6.38□□□□□ -1.39
HDGFP1-201ENST00000405943 RRBP1Q9P2E9 1410 aaKnown RBP6.38□□□□□ -1.39
HDGFP1-201ENST00000405943 ERICH3Q5RHP9 1530 aa6.36□□□□□ -1.39
HDGFP1-201ENST00000405943 CCNB3Q8WWL7 1395 aa6.36□□□□□ -1.39
HDGFP1-201ENST00000405943 RAPGEF2Q9Y4G8 1499 aa6.35□□□□□ -1.39
HDGFP1-201ENST00000405943 ANP32CO43423 234 aa6.35□□□□□ -1.39
HDGFP1-201ENST00000405943 RBM19Q9Y4C8 960 aaKnown RBP6.35□□□□□ -1.39
HDGFP1-201ENST00000405943 FANCIQ9NVI1 1328 aa6.34□□□□□ -1.39
HDGFP1-201ENST00000405943 ERICH6BQ5W0A0 696 aa6.34□□□□□ -1.39
HDGFP1-201ENST00000405943 CDK11AQ9UQ88 783 aaPredicted RBP6.34□□□□□ -1.39
HDGFP1-201ENST00000405943 SYNJ1O43426 1573 aa6.34□□□□□ -1.39
HDGFP1-201ENST00000405943 PEG3Q9GZU2 1588 aa6.34□□□□□ -1.39
HDGFP1-201ENST00000405943 BCANQ96GW7 911 aa6.33□□□□□ -1.4
HDGFP1-201ENST00000405943 ARAP1Q96P48 1450 aa6.31□□□□□ -1.4
HDGFP1-201ENST00000405943 PRXQ9BXM0 1461 aa6.31□□□□□ -1.4
HDGFP1-201ENST00000405943 MAP3K1Q13233 1512 aa6.3□□□□□ -1.4
HDGFP1-201ENST00000405943 RANGAP1P46060 587 aaPredicted RBP6.3□□□□□ -1.4
HDGFP1-201ENST00000405943 SETD5Q9C0A6 1442 aa6.3□□□□□ -1.4
HDGFP1-201ENST00000405943 RAB3GAP2Q9H2M9 1393 aa6.3□□□□□ -1.4
HDGFP1-201ENST00000405943 TOP2BQ02880 1626 aa6.29□□□□□ -1.4
HDGFP1-201ENST00000405943 DDX10Q13206 875 aaKnown RBP6.29□□□□□ -1.4
HDGFP1-201ENST00000405943 KANK4Q5T7N3 995 aaPredicted RBP6.29□□□□□ -1.4
HDGFP1-201ENST00000405943 KIF27Q86VH2 1401 aa6.28□□□□□ -1.4
HDGFP1-201ENST00000405943 PPP1R15AO75807 674 aaPredicted RBP6.28□□□□□ -1.4
HDGFP1-201ENST00000405943 MAPKBP1O60336 1514 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms