RNA–Protein interactions for RNA: ENST00000404249.7

CDK11A-208, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDK11A, Length 2,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-208ENST00000404249 DCAF11Q8TEB1 546 aa24.18■■□□□ 1.46
CDK11A-208ENST00000404249 TRPM1Q7Z4N2 1603 aa24.18■■□□□ 1.46
CDK11A-208ENST00000404249 RSPH4AQ5TD94 716 aa24.16■■□□□ 1.46
CDK11A-208ENST00000404249 ST20-MTHFSA0A0A6YYL1 179 aa24.16■■□□□ 1.46
CDK11A-208ENST00000404249 ARHGAP5Q13017 1502 aa24.15■■□□□ 1.46
CDK11A-208ENST00000404249 SHROOM2Q13796 1616 aa24.15■■□□□ 1.46
CDK11A-208ENST00000404249 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.14■■□□□ 1.45
CDK11A-208ENST00000404249 MYO5CQ9NQX4 1742 aa24.13■■□□□ 1.45
CDK11A-208ENST00000404249 CCDC144AA2RUR9 1427 aa24.13■■□□□ 1.45
CDK11A-208ENST00000404249 NUDCQ9Y266 331 aa24.13■■□□□ 1.45
CDK11A-208ENST00000404249 PLXNC1O60486 1568 aa24.12■■□□□ 1.45
CDK11A-208ENST00000404249 PRAG1Q86YV5 1406 aa24.12■■□□□ 1.45
CDK11A-208ENST00000404249 FANCIQ9NVI1 1328 aa24.12■■□□□ 1.45
CDK11A-208ENST00000404249 B4GALNT3Q6L9W6 998 aa24.12■■□□□ 1.45
CDK11A-208ENST00000404249 PNISRQ8TF01 805 aaKnown RBP24.11■■□□□ 1.45
CDK11A-208ENST00000404249 KTN1Q86UP2 1357 aaKnown RBP24.1■■□□□ 1.45
CDK11A-208ENST00000404249 IQGAP3Q86VI3 1631 aa24.1■■□□□ 1.45
CDK11A-208ENST00000404249 TMC1Q8TDI8 760 aa24.1■■□□□ 1.45
CDK11A-208ENST00000404249 BRD4O60885 1362 aaPredicted RBP24.07■■□□□ 1.44
CDK11A-208ENST00000404249 MYBBP1AQ9BQG0 1328 aaKnown RBP24.07■■□□□ 1.44
CDK11A-208ENST00000404249 ABCC2Q92887 1545 aa24.07■■□□□ 1.44
CDK11A-208ENST00000404249 LAMC1P11047 1609 aa24.07■■□□□ 1.44
CDK11A-208ENST00000404249 PLA2R1Q13018 1463 aa24.06■■□□□ 1.44
CDK11A-208ENST00000404249 MSH5O43196 834 aa24.06■■□□□ 1.44
CDK11A-208ENST00000404249 LRPPRCP42704 1394 aaKnown RBP24.06■■□□□ 1.44
CDK11A-208ENST00000404249 PLEKHH2Q8IVE3 1493 aa24.06■■□□□ 1.44
CDK11A-208ENST00000404249 RNF123Q5XPI4 1314 aa24.05■■□□□ 1.44
CDK11A-208ENST00000404249 RALBP1Q15311 655 aa24.05■■□□□ 1.44
CDK11A-208ENST00000404249 A2MP01023 1474 aa24.05■■□□□ 1.44
CDK11A-208ENST00000404249 GPRASP1Q5JY77 1395 aa24.02■■□□□ 1.44
CDK11A-208ENST00000404249 ERCC6L2Q5T890 1561 aa24.02■■□□□ 1.44
CDK11A-208ENST00000404249 PRDM15P57071 1507 aaPredicted RBP24.01■■□□□ 1.43
CDK11A-208ENST00000404249 DUOX2Q9NRD8 1548 aa24.01■■□□□ 1.43
CDK11A-208ENST00000404249 EIF2AK4Q9P2K8 1649 aaKnown RBP24.01■■□□□ 1.43
CDK11A-208ENST00000404249 MAGI2Q86UL8 1455 aa24■■□□□ 1.43
CDK11A-208ENST00000404249 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.99■■□□□ 1.432e-6■■■■□ 19.5
CDK11A-208ENST00000404249 COL17A1Q9UMD9 1497 aaPredicted RBP23.98■■□□□ 1.43
CDK11A-208ENST00000404249 RGL3Q3MIN7 710 aa23.98■■□□□ 1.43
CDK11A-208ENST00000404249 SENP3-EIF4A1A0A087X0R7 540 aa23.97■■□□□ 1.43
CDK11A-208ENST00000404249 PARD3Q8TEW0 1356 aa23.97■■□□□ 1.43
CDK11A-208ENST00000404249 NBPF1Q3BBV0 1214 aa23.96■■□□□ 1.43
CDK11A-208ENST00000404249 ERBINQ96RT1 1412 aa23.96■■□□□ 1.43
CDK11A-208ENST00000404249 ATP10AO60312 1499 aa23.95■■□□□ 1.42
CDK11A-208ENST00000404249 ZCCHC11Q5TAX3 1644 aaKnown RBP23.94■■□□□ 1.42
CDK11A-208ENST00000404249 RNF17Q9BXT8 1623 aaKnown RBP23.92■■□□□ 1.42
CDK11A-208ENST00000404249 NLRP13Q86W25 1043 aa23.92■■□□□ 1.42
CDK11A-208ENST00000404249 ABCC1P33527 1531 aa23.91■■□□□ 1.42
CDK11A-208ENST00000404249 PLCH2O75038 1416 aa23.9■■□□□ 1.42
CDK11A-208ENST00000404249 DISP3Q9P2K9 1392 aa23.89■■□□□ 1.42
CDK11A-208ENST00000404249 CCDC136Q96JN2 1154 aa23.89■■□□□ 1.41
CDK11A-208ENST00000404249 PER1O15534 1290 aaPredicted RBP23.88■■□□□ 1.41
CDK11A-208ENST00000404249 TESK2Q96S53 571 aa23.88■■□□□ 1.41
CDK11A-208ENST00000404249 ERICH6Q7L0X2 663 aa23.86■■□□□ 1.41
CDK11A-208ENST00000404249 WASHC2CQ9Y4E1 1318 aa23.83■■□□□ 1.41
CDK11A-208ENST00000404249 UHRF1BP1LA0JNW5 1464 aa23.83■■□□□ 1.41
CDK11A-208ENST00000404249 EFCAB2Q5VUJ9 269 aa23.82■■□□□ 1.4
CDK11A-208ENST00000404249 TRAPPC8Q9Y2L5 1435 aa23.82■■□□□ 1.4
CDK11A-208ENST00000404249 MADDQ8WXG6 1647 aa23.82■■□□□ 1.4
CDK11A-208ENST00000404249 CLASP1Q7Z460 1538 aa23.81■■□□□ 1.4
CDK11A-208ENST00000404249 IQGAP1P46940 1657 aa23.8■■□□□ 1.4
CDK11A-208ENST00000404249 TMF1P82094 1093 aa23.8■■□□□ 1.4
CDK11A-208ENST00000404249 ZMYM4Q5VZL5 1548 aa23.79■■□□□ 1.4
CDK11A-208ENST00000404249 RRP1P56182 461 aaKnown RBP23.79■■□□□ 1.4
CDK11A-208ENST00000404249 CEP152O94986 1710 aa23.79■■□□□ 1.4
CDK11A-208ENST00000404249 SPHKAPQ2M3C7 1700 aa23.78■■□□□ 1.4
CDK11A-208ENST00000404249 PDE3BQ13370 1112 aa23.78■■□□□ 1.4
CDK11A-208ENST00000404249 CC2D1BQ5T0F9 858 aaKnown RBP23.78■■□□□ 1.4
CDK11A-208ENST00000404249 PANK3Q9H999 370 aa23.78■■□□□ 1.4
CDK11A-208ENST00000404249 TRPM2O94759 1503 aa23.77■■□□□ 1.4
CDK11A-208ENST00000404249 INSRP06213 1382 aa23.77■■□□□ 1.4
CDK11A-208ENST00000404249 BLMP54132 1417 aaPredicted RBP23.77■■□□□ 1.4
CDK11A-208ENST00000404249 ZFYVE16Q7Z3T8 1539 aa23.77■■□□□ 1.4
CDK11A-208ENST00000404249 RCAN3Q9UKA8 241 aa23.75■■□□□ 1.39
CDK11A-208ENST00000404249 SALL2Q9Y467 1007 aaPredicted RBP23.75■■□□□ 1.39
CDK11A-208ENST00000404249 ARAP3Q8WWN8 1544 aa23.75■■□□□ 1.39
CDK11A-208ENST00000404249 DEPDC5O75140 1603 aa23.75■■□□□ 1.39
CDK11A-208ENST00000404249 RTEL1-TNFRSF6BF6WH68 1400 aa23.73■■□□□ 1.39
CDK11A-208ENST00000404249 CLTCL1P53675 1640 aa23.72■■□□□ 1.39
CDK11A-208ENST00000404249 SPAG9O60271 1321 aaKnown RBP23.72■■□□□ 1.39
CDK11A-208ENST00000404249 TET3O43151 1660 aa23.7■■□□□ 1.39
CDK11A-208ENST00000404249 WDR7Q9Y4E6 1490 aa23.7■■□□□ 1.38
CDK11A-208ENST00000404249 PTPRTO14522 1441 aa23.68■■□□□ 1.38
CDK11A-208ENST00000404249 EXOC6Q8TAG9 804 aa23.68■■□□□ 1.38
CDK11A-208ENST00000404249 SYNMO15061 1565 aa23.67■■□□□ 1.38
CDK11A-208ENST00000404249 INO80Q9ULG1 1556 aaPredicted RBP23.66■■□□□ 1.38
CDK11A-208ENST00000404249 CDCA7LQ96GN5 454 aa23.66■■□□□ 1.38
CDK11A-208ENST00000404249 SCAPERQ9BY12 1400 aa23.65■■□□□ 1.38
CDK11A-208ENST00000404249 SCAF11Q99590 1463 aaKnown RBP23.65■■□□□ 1.38
CDK11A-208ENST00000404249 AFAP1Q8N556 730 aa23.64■■□□□ 1.38
CDK11A-208ENST00000404249 ABCA9Q8IUA7 1624 aa23.64■■□□□ 1.38
CDK11A-208ENST00000404249 ATP7AQ04656 1500 aa23.64■■□□□ 1.38
CDK11A-208ENST00000404249 VWDEQ8N2E2 1590 aa23.64■■□□□ 1.37
CDK11A-208ENST00000404249 NOP58Q9Y2X3 529 aaKnown RBP23.63■■□□□ 1.37
CDK11A-208ENST00000404249 MYOM1P52179 1685 aa23.62■■□□□ 1.37
CDK11A-208ENST00000404249 KIAA1210Q9ULL0 1709 aa23.62■■□□□ 1.37
CDK11A-208ENST00000404249 STAC3Q96MF2 364 aa23.61■■□□□ 1.37
CDK11A-208ENST00000404249 KNSTRNQ9Y448 316 aa23.59■■□□□ 1.37
CDK11A-208ENST00000404249 KANK1Q14678 1352 aa23.59■■□□□ 1.37
CDK11A-208ENST00000404249 ANP32AP39687 249 aaKnown RBP23.59■■□□□ 1.37
CDK11A-208ENST00000404249 NEURL4Q96JN8 1562 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms