RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 SHANK2Q9UPX8 1470 aa19.07■□□□□ 0.64
ATG3-202ENST00000402314 RTL5Q5HYW3 569 aaPredicted RBP19.05■□□□□ 0.64
ATG3-202ENST00000402314 ZBED9Q6R2W3 1325 aa19.05■□□□□ 0.64
ATG3-202ENST00000402314 CCDC141Q6ZP82 1450 aa19.05■□□□□ 0.64
ATG3-202ENST00000402314 SYCP2Q9BX26 1530 aa19.04■□□□□ 0.64
ATG3-202ENST00000402314 KDM5CP41229 1560 aa19.03■□□□□ 0.64
ATG3-202ENST00000402314 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.03■□□□□ 0.64
ATG3-202ENST00000402314 ARHGAP5Q13017 1502 aa19.03■□□□□ 0.64
ATG3-202ENST00000402314 ROCK2O75116 1388 aaKnown RBP19.03■□□□□ 0.64
ATG3-202ENST00000402314 CDC42BPBQ9Y5S2 1711 aa19.03■□□□□ 0.64
ATG3-202ENST00000402314 CHD1O14646 1710 aa19.02■□□□□ 0.64
ATG3-202ENST00000402314 TTC37Q6PGP7 1564 aa19.01■□□□□ 0.63
ATG3-202ENST00000402314 RALGAPBQ86X10 1494 aa19.01■□□□□ 0.63
ATG3-202ENST00000402314 LAS1LQ9Y4W2 734 aaKnown RBP19.01■□□□□ 0.63
ATG3-202ENST00000402314 UHRF1BP1Q6BDS2 1440 aa19.01■□□□□ 0.63
ATG3-202ENST00000402314 TMC1Q8TDI8 760 aa19■□□□□ 0.63
ATG3-202ENST00000402314 FAM135AQ9P2D6 1515 aa19■□□□□ 0.63
ATG3-202ENST00000402314 ANP32AP39687 249 aaKnown RBP19■□□□□ 0.63
ATG3-202ENST00000402314 PLEKHH2Q8IVE3 1493 aa19■□□□□ 0.63
ATG3-202ENST00000402314 ZBTB47Q9UFB7 747 aaPredicted RBP19■□□□□ 0.63
ATG3-202ENST00000402314 CCDC144AA2RUR9 1427 aa18.98■□□□□ 0.63
ATG3-202ENST00000402314 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.98■□□□□ 0.633e-6■■■■□ 23
ATG3-202ENST00000402314 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
ATG3-202ENST00000402314 ARHGEF5Q12774 1597 aa18.97■□□□□ 0.63
ATG3-202ENST00000402314 PLA2R1Q13018 1463 aa18.96■□□□□ 0.63
ATG3-202ENST00000402314 PNISRQ8TF01 805 aaKnown RBP18.96■□□□□ 0.63
ATG3-202ENST00000402314 PREX2Q70Z35 1606 aa18.96■□□□□ 0.63
ATG3-202ENST00000402314 KDM5DQ9BY66 1539 aa18.95■□□□□ 0.62
ATG3-202ENST00000402314 POLR1AO95602 1720 aaPredicted RBP18.95■□□□□ 0.62
ATG3-202ENST00000402314 RSPH4AQ5TD94 716 aa18.95■□□□□ 0.62
ATG3-202ENST00000402314 ARHGEF12Q9NZN5 1544 aa18.95■□□□□ 0.62
ATG3-202ENST00000402314 IPO9Q96P70 1041 aaKnown RBP18.93■□□□□ 0.62
ATG3-202ENST00000402314 AFAP1Q8N556 730 aa18.93■□□□□ 0.62
ATG3-202ENST00000402314 ERICH6BQ5W0A0 696 aa18.91■□□□□ 0.62
ATG3-202ENST00000402314 ARID4BQ4LE39 1312 aaPredicted RBP18.9■□□□□ 0.62
ATG3-202ENST00000402314 PRAG1Q86YV5 1406 aa18.9■□□□□ 0.62
ATG3-202ENST00000402314 CC2D1BQ5T0F9 858 aaKnown RBP18.9■□□□□ 0.62
ATG3-202ENST00000402314 ABCC2Q92887 1545 aa18.88■□□□□ 0.61
ATG3-202ENST00000402314 A2MP01023 1474 aa18.88■□□□□ 0.61
ATG3-202ENST00000402314 TRAPPC8Q9Y2L5 1435 aa18.88■□□□□ 0.61
ATG3-202ENST00000402314 EFCAB2Q5VUJ9 269 aa18.88■□□□□ 0.61
ATG3-202ENST00000402314 NUDCQ9Y266 331 aa18.87■□□□□ 0.61
ATG3-202ENST00000402314 DISP3Q9P2K9 1392 aa18.86■□□□□ 0.61
ATG3-202ENST00000402314 SKAP1Q86WV1 359 aa18.85■□□□□ 0.61
ATG3-202ENST00000402314 NEFMP07197 916 aa18.84■□□□□ 0.61
ATG3-202ENST00000402314 MYBBP1AQ9BQG0 1328 aaKnown RBP18.84■□□□□ 0.61
ATG3-202ENST00000402314 TESK2Q96S53 571 aa18.84■□□□□ 0.61
ATG3-202ENST00000402314 SHROOM2Q13796 1616 aa18.84■□□□□ 0.61
ATG3-202ENST00000402314 SMG6Q86US8 1419 aaKnown RBP18.83■□□□□ 0.6
ATG3-202ENST00000402314 PANK3Q9H999 370 aa18.82■□□□□ 0.6
ATG3-202ENST00000402314 PLCH2O75038 1416 aa18.82■□□□□ 0.6
ATG3-202ENST00000402314 PER1O15534 1290 aaPredicted RBP18.82■□□□□ 0.6
ATG3-202ENST00000402314 SPAG9O60271 1321 aaKnown RBP18.81■□□□□ 0.6
ATG3-202ENST00000402314 RALBP1Q15311 655 aa18.81■□□□□ 0.6
ATG3-202ENST00000402314 MYO5CQ9NQX4 1742 aa18.8■□□□□ 0.6
ATG3-202ENST00000402314 TRPM1Q7Z4N2 1603 aa18.78■□□□□ 0.6
ATG3-202ENST00000402314 KTN1Q86UP2 1357 aaKnown RBP18.78■□□□□ 0.6
ATG3-202ENST00000402314 UNC13BO14795 1591 aa18.77■□□□□ 0.6
ATG3-202ENST00000402314 BRD4O60885 1362 aaPredicted RBP18.77■□□□□ 0.59
ATG3-202ENST00000402314 NLRP13Q86W25 1043 aa18.76■□□□□ 0.59
ATG3-202ENST00000402314 ZCCHC11Q5TAX3 1644 aaKnown RBP18.76■□□□□ 0.59
ATG3-202ENST00000402314 CDCA7LQ96GN5 454 aa18.76■□□□□ 0.59
ATG3-202ENST00000402314 LRPPRCP42704 1394 aaKnown RBP18.76■□□□□ 0.59
ATG3-202ENST00000402314 MAST1Q9Y2H9 1570 aa18.76■□□□□ 0.59
ATG3-202ENST00000402314 DUOX2Q9NRD8 1548 aa18.76■□□□□ 0.59
ATG3-202ENST00000402314 EXOC6Q8TAG9 804 aa18.75■□□□□ 0.59
ATG3-202ENST00000402314 GPRASP1Q5JY77 1395 aa18.74■□□□□ 0.59
ATG3-202ENST00000402314 SLC4A3P48751 1232 aa18.74■□□□□ 0.59
ATG3-202ENST00000402314 KIF3BO15066 747 aa18.74■□□□□ 0.59
ATG3-202ENST00000402314 EIF5BO60841 1220 aaKnown RBP18.74■□□□□ 0.59
ATG3-202ENST00000402314 ERBINQ96RT1 1412 aa18.73■□□□□ 0.59
ATG3-202ENST00000402314 TMF1P82094 1093 aa18.73■□□□□ 0.59
ATG3-202ENST00000402314 BRPF3Q9ULD4 1205 aa18.73■□□□□ 0.59
ATG3-202ENST00000402314 PARD3Q8TEW0 1356 aa18.73■□□□□ 0.59
ATG3-202ENST00000402314 IQGAP3Q86VI3 1631 aa18.73■□□□□ 0.59
ATG3-202ENST00000402314 PLXNC1O60486 1568 aa18.72■□□□□ 0.59
ATG3-202ENST00000402314 COL17A1Q9UMD9 1497 aaPredicted RBP18.71■□□□□ 0.58
ATG3-202ENST00000402314 ABCC1P33527 1531 aa18.7■□□□□ 0.58
ATG3-202ENST00000402314 RNF123Q5XPI4 1314 aa18.7■□□□□ 0.58
ATG3-202ENST00000402314 E9PCH4 1651 aa18.68■□□□□ 0.58
ATG3-202ENST00000402314 SCAPERQ9BY12 1400 aa18.68■□□□□ 0.58
ATG3-202ENST00000402314 CLASP1Q7Z460 1538 aa18.68■□□□□ 0.58
ATG3-202ENST00000402314 PDE4AP27815 886 aa18.67■□□□□ 0.58
ATG3-202ENST00000402314 PRDM15P57071 1507 aaPredicted RBP18.67■□□□□ 0.58
ATG3-202ENST00000402314 PLIN1O60240 522 aa18.66■□□□□ 0.58
ATG3-202ENST00000402314 MAGI2Q86UL8 1455 aa18.66■□□□□ 0.58
ATG3-202ENST00000402314 RCAN3Q9UKA8 241 aa18.65■□□□□ 0.58
ATG3-202ENST00000402314 ATP10AO60312 1499 aa18.65■□□□□ 0.58
ATG3-202ENST00000402314 RRP1P56182 461 aaKnown RBP18.64■□□□□ 0.57
ATG3-202ENST00000402314 UHRF1BP1LA0JNW5 1464 aa18.64■□□□□ 0.57
ATG3-202ENST00000402314 CFAP70Q5T0N1 1121 aa18.63■□□□□ 0.57
ATG3-202ENST00000402314 ADAMTS8Q9UP79 889 aa18.63■□□□□ 0.57
ATG3-202ENST00000402314 FANCAO15360 1455 aa18.62■□□□□ 0.57
ATG3-202ENST00000402314 KNSTRNQ9Y448 316 aa18.62■□□□□ 0.57
ATG3-202ENST00000402314 CHGAP10645 457 aaKnown RBP18.61■□□□□ 0.57
ATG3-202ENST00000402314 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
ATG3-202ENST00000402314 ZFYVE16Q7Z3T8 1539 aa18.61■□□□□ 0.57
ATG3-202ENST00000402314 UGGT1Q9NYU2 1555 aa18.61■□□□□ 0.57
ATG3-202ENST00000402314 ADGRF5Q8IZF2 1346 aa18.59■□□□□ 0.57
ATG3-202ENST00000402314 WDR7Q9Y4E6 1490 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms