RNA–Protein interactions for RNA: ENST00000401499.1

AC008060.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC008060.1, Length 1,551 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008060.1-201ENST00000401499 DEPDC5O75140 1603 aa28.58■■■□□ 2.17
AC008060.1-201ENST00000401499 MPHOSPH9Q99550 1183 aa28.58■■■□□ 2.17
AC008060.1-201ENST00000401499 NUP155O75694 1391 aa28.56■■■□□ 2.16
AC008060.1-201ENST00000401499 IQGAP3Q86VI3 1631 aa28.54■■■□□ 2.16
AC008060.1-201ENST00000401499 BCORL1Q5H9F3 1711 aa28.53■■■□□ 2.16
AC008060.1-201ENST00000401499 FAM135AQ9P2D6 1515 aa28.53■■■□□ 2.16
AC008060.1-201ENST00000401499 MROH1Q8NDA8 1641 aa28.52■■■□□ 2.16
AC008060.1-201ENST00000401499 SLC4A1APQ9BWU0 796 aaKnown RBP28.51■■■□□ 2.15
AC008060.1-201ENST00000401499 RNF17Q9BXT8 1623 aaKnown RBP28.49■■■□□ 2.15
AC008060.1-201ENST00000401499 PRDM15P57071 1507 aaPredicted RBP28.47■■■□□ 2.15
AC008060.1-201ENST00000401499 ARHGEF40Q8TER5 1519 aa28.47■■■□□ 2.15
AC008060.1-201ENST00000401499 KIF3BO15066 747 aa28.45■■■□□ 2.15
AC008060.1-201ENST00000401499 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.45■■■□□ 2.15
AC008060.1-201ENST00000401499 VWDEQ8N2E2 1590 aa28.45■■■□□ 2.15
AC008060.1-201ENST00000401499 FOXD1Q16676 465 aa28.45■■■□□ 2.14
AC008060.1-201ENST00000401499 REREQ9P2R6 1566 aa28.44■■■□□ 2.14
AC008060.1-201ENST00000401499 ATP10AO60312 1499 aa28.43■■■□□ 2.14
AC008060.1-201ENST00000401499 SIN3AQ96ST3 1273 aa28.41■■■□□ 2.14
AC008060.1-201ENST00000401499 PKD2Q13563 968 aa28.41■■■□□ 2.14
AC008060.1-201ENST00000401499 SIGLEC1Q9BZZ2 1709 aa28.4■■■□□ 2.14
AC008060.1-201ENST00000401499 ANKRD30BQ9BXX2 1392 aa28.39■■■□□ 2.14
AC008060.1-201ENST00000401499 TET3O43151 1660 aa28.36■■■□□ 2.13
AC008060.1-201ENST00000401499 CEP152O94986 1710 aa28.35■■■□□ 2.13
AC008060.1-201ENST00000401499 E9PCH4 1651 aa28.33■■■□□ 2.13
AC008060.1-201ENST00000401499 AGLP35573 1532 aa28.33■■■□□ 2.13
AC008060.1-201ENST00000401499 KANK1Q14678 1352 aa28.33■■■□□ 2.13
AC008060.1-201ENST00000401499 NEUROD1Q13562 356 aa28.33■■■□□ 2.12
AC008060.1-201ENST00000401499 LMTK2Q8IWU2 1503 aa28.3■■■□□ 2.12
AC008060.1-201ENST00000401499 GGT6Q6P531 493 aa28.28■■■□□ 2.12
AC008060.1-201ENST00000401499 ABCC3O15438 1527 aa28.26■■■□□ 2.12
AC008060.1-201ENST00000401499 EFCAB6Q5THR3 1501 aa28.26■■■□□ 2.12
AC008060.1-201ENST00000401499 RPRD2Q5VT52 1461 aaKnown RBP28.26■■■□□ 2.11
AC008060.1-201ENST00000401499 PLA2R1Q13018 1463 aa28.24■■■□□ 2.11
AC008060.1-201ENST00000401499 ZC3H13Q5T200 1668 aaKnown RBP28.24■■■□□ 2.11
AC008060.1-201ENST00000401499 CAMSAP1Q5T5Y3 1602 aa28.21■■■□□ 2.11
AC008060.1-201ENST00000401499 SPHKAPQ2M3C7 1700 aa28.21■■■□□ 2.11
AC008060.1-201ENST00000401499 TIMELESSQ9UNS1 1208 aa28.18■■■□□ 2.1
AC008060.1-201ENST00000401499 TONSLQ96HA7 1378 aa28.17■■■□□ 2.1
AC008060.1-201ENST00000401499 WASHC2CQ9Y4E1 1318 aa28.15■■■□□ 2.1
AC008060.1-201ENST00000401499 TRPM2O94759 1503 aa28.15■■■□□ 2.1
AC008060.1-201ENST00000401499 PTPRTO14522 1441 aa28.15■■■□□ 2.1
AC008060.1-201ENST00000401499 NPATQ14207 1427 aa28.13■■■□□ 2.09
AC008060.1-201ENST00000401499 CCDC144AA2RUR9 1427 aa28.11■■■□□ 2.09
AC008060.1-201ENST00000401499 CLTCQ00610 1675 aaKnown RBP28.11■■■□□ 2.09
AC008060.1-201ENST00000401499 CLTCL1P53675 1640 aa28.08■■■□□ 2.09
AC008060.1-201ENST00000401499 CFAP65Q6ZU64 1925 aaKnown RBP28.08■■■□□ 2.09
AC008060.1-201ENST00000401499 ARHGAP31Q2M1Z3 1444 aa28.07■■■□□ 2.08
AC008060.1-201ENST00000401499 MLECQ14165 292 aa28.06■■■□□ 2.08
AC008060.1-201ENST00000401499 PPP6R1Q9UPN7 881 aa28.06■■■□□ 2.08
AC008060.1-201ENST00000401499 ARID4BQ4LE39 1312 aaPredicted RBP28.04■■■□□ 2.08
AC008060.1-201ENST00000401499 PPP1R15AO75807 674 aaPredicted RBP28.03■■■□□ 2.08
AC008060.1-201ENST00000401499 L3MBTL2Q969R5 705 aa28.03■■■□□ 2.08
AC008060.1-201ENST00000401499 UGGT1Q9NYU2 1555 aa28.03■■■□□ 2.08
AC008060.1-201ENST00000401499 PREX1Q8TCU6 1659 aa28.01■■■□□ 2.07
AC008060.1-201ENST00000401499 NOS1P29475 1434 aa28■■■□□ 2.07
AC008060.1-201ENST00000401499 SYNMO15061 1565 aa27.99■■■□□ 2.07
AC008060.1-201ENST00000401499 CNTLNQ9NXG0 1405 aa27.99■■■□□ 2.07
AC008060.1-201ENST00000401499 SPATA31E1Q6ZUB1 1445 aa27.95■■■□□ 2.07
AC008060.1-201ENST00000401499 PIK3C2BO00750 1634 aa27.95■■■□□ 2.06
AC008060.1-201ENST00000401499 KIF1BO60333 1816 aa27.94■■■□□ 2.06
AC008060.1-201ENST00000401499 MROH2AA6NES4 1674 aa27.93■■■□□ 2.06
AC008060.1-201ENST00000401499 FER1L4A9Z1Z3 1794 aa27.92■■■□□ 2.06
AC008060.1-201ENST00000401499 ERVK-7P63135 1459 aa27.91■■■□□ 2.06
AC008060.1-201ENST00000401499 NEURL4Q96JN8 1562 aa27.91■■■□□ 2.06
AC008060.1-201ENST00000401499 SPATA31D1Q6ZQQ2 1576 aa27.88■■■□□ 2.05
AC008060.1-201ENST00000401499 ADGRB3O60242 1522 aa27.87■■■□□ 2.05
AC008060.1-201ENST00000401499 ZMYM3Q14202 1370 aa27.86■■■□□ 2.05
AC008060.1-201ENST00000401499 FBXO31Q5XUX0 539 aaPredicted RBP27.86■■■□□ 2.05
AC008060.1-201ENST00000401499 ESF1Q9H501 851 aaKnown RBP27.86■■■□□ 2.05
AC008060.1-201ENST00000401499 RGL3Q3MIN7 710 aa27.86■■■□□ 2.05
AC008060.1-201ENST00000401499 NBPF8Q3BBV2 869 aa27.84■■■□□ 2.05
AC008060.1-201ENST00000401499 UHRF1BP1Q6BDS2 1440 aa27.83■■■□□ 2.05
AC008060.1-201ENST00000401499 DCAF11Q8TEB1 546 aa27.82■■■□□ 2.04
AC008060.1-201ENST00000401499 IFT172Q9UG01 1749 aa27.81■■■□□ 2.04
AC008060.1-201ENST00000401499 C3P01024 1663 aa27.81■■■□□ 2.04
AC008060.1-201ENST00000401499 MADDQ8WXG6 1647 aa27.81■■■□□ 2.04
AC008060.1-201ENST00000401499 ADAMTSL3P82987 1691 aa27.79■■■□□ 2.04
AC008060.1-201ENST00000401499 KDM2AQ9Y2K7 1162 aa27.77■■■□□ 2.04
AC008060.1-201ENST00000401499 MYO5BQ9ULV0 1848 aa27.77■■■□□ 2.04
AC008060.1-201ENST00000401499 IDI1Q13907 227 aa27.76■■■□□ 2.03
AC008060.1-201ENST00000401499 SLC52A1Q9NWF4 448 aa27.76■■■□□ 2.03
AC008060.1-201ENST00000401499 RIMS1Q86UR5 1692 aaKnown RBP27.75■■■□□ 2.03
AC008060.1-201ENST00000401499 TMEM131LA2VDJ0 1609 aa27.75■■■□□ 2.03
AC008060.1-201ENST00000401499 PRAG1Q86YV5 1406 aa27.75■■■□□ 2.03
AC008060.1-201ENST00000401499 PPLO60437 1756 aa27.73■■■□□ 2.03
AC008060.1-201ENST00000401499 ZNF326Q5BKZ1 582 aaKnown RBP27.73■■■□□ 2.03
AC008060.1-201ENST00000401499 TRPM1Q7Z4N2 1603 aa27.72■■■□□ 2.03
AC008060.1-201ENST00000401499 RALGAPBQ86X10 1494 aa27.71■■■□□ 2.03
AC008060.1-201ENST00000401499 CHGAP10645 457 aaKnown RBP27.71■■■□□ 2.03
AC008060.1-201ENST00000401499 MYOM2P54296 1465 aa27.69■■■□□ 2.02
AC008060.1-201ENST00000401499 TNRQ92752 1358 aa27.68■■■□□ 2.02
AC008060.1-201ENST00000401499 CEBPAP49715 358 aaPredicted RBP27.68■■■□□ 2.02
AC008060.1-201ENST00000401499 ZNF316A6NFI3 1004 aaPredicted RBP27.67■■■□□ 2.02
AC008060.1-201ENST00000401499 NEXMIFQ5QGS0 1516 aa27.67■■■□□ 2.02
AC008060.1-201ENST00000401499 STAC3Q96MF2 364 aa27.63■■■□□ 2.01
AC008060.1-201ENST00000401499 NRXN1Q9ULB1 1477 aa27.63■■■□□ 2.01
AC008060.1-201ENST00000401499 A2ML1A8K2U0 1454 aa27.61■■■□□ 2.01
AC008060.1-201ENST00000401499 RPGRIP1LQ68CZ1 1315 aa27.61■■■□□ 2.01
AC008060.1-201ENST00000401499 KDM5AP29375 1690 aaKnown RBP27.61■■■□□ 2.01
AC008060.1-201ENST00000401499 UBR1Q8IWV7 1749 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms