RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 RRP7BPQ9NSQ0 103 aa10.23□□□□□ -0.77
USP16-203ENST00000399975 RAPGEF3O95398 923 aa10.22□□□□□ -0.77
USP16-203ENST00000399975 MROH1Q8NDA8 1641 aa10.22□□□□□ -0.77
USP16-203ENST00000399975 PRDM15P57071 1507 aaPredicted RBP10.22□□□□□ -0.77
USP16-203ENST00000399975 YEATS2Q9ULM3 1422 aa10.2□□□□□ -0.78
USP16-203ENST00000399975 ZC3H13Q5T200 1668 aaKnown RBP10.19□□□□□ -0.78
USP16-203ENST00000399975 LMTK2Q8IWU2 1503 aa10.19□□□□□ -0.78
USP16-203ENST00000399975 PZPP20742 1482 aa10.18□□□□□ -0.78
USP16-203ENST00000399975 DHX57Q6P158 1386 aaKnown RBP10.18□□□□□ -0.78
USP16-203ENST00000399975 SIGLEC1Q9BZZ2 1709 aa10.18□□□□□ -0.78
USP16-203ENST00000399975 CLSPNQ9HAW4 1339 aa10.18□□□□□ -0.78
USP16-203ENST00000399975 TET3O43151 1660 aa10.17□□□□□ -0.78
USP16-203ENST00000399975 PPP6R1Q9UPN7 881 aa10.15□□□□□ -0.78
USP16-203ENST00000399975 CEP152O94986 1710 aa10.13□□□□□ -0.79
USP16-203ENST00000399975 ABCC3O15438 1527 aa10.13□□□□□ -0.79
USP16-203ENST00000399975 AEBP2Q6ZN18 517 aaPredicted RBP10.12□□□□□ -0.79
USP16-203ENST00000399975 MROH2AA6NES4 1674 aa10.12□□□□□ -0.79
USP16-203ENST00000399975 KANK1Q14678 1352 aa10.12□□□□□ -0.79
USP16-203ENST00000399975 CAMSAP1Q5T5Y3 1602 aa10.12□□□□□ -0.79
USP16-203ENST00000399975 E9PCH4 1651 aa10.12□□□□□ -0.79
USP16-203ENST00000399975 EFCAB6Q5THR3 1501 aa10.12□□□□□ -0.79
USP16-203ENST00000399975 NUP155O75694 1391 aa10.12□□□□□ -0.79
USP16-203ENST00000399975 MYT1LQ9UL68 1186 aa10.11□□□□□ -0.79
USP16-203ENST00000399975 RPRD2Q5VT52 1461 aaKnown RBP10.11□□□□□ -0.79
USP16-203ENST00000399975 ARHGAP31Q2M1Z3 1444 aa10.11□□□□□ -0.79
USP16-203ENST00000399975 MPHOSPH9Q99550 1183 aa10.11□□□□□ -0.79
USP16-203ENST00000399975 KIF3BO15066 747 aa10.1□□□□□ -0.79
USP16-203ENST00000399975 SPHKAPQ2M3C7 1700 aa10.09□□□□□ -0.79
USP16-203ENST00000399975 TRIM52Q96A61 297 aa10.09□□□□□ -0.79
USP16-203ENST00000399975 PTPRTO14522 1441 aa10.09□□□□□ -0.79
USP16-203ENST00000399975 NEURL4Q96JN8 1562 aa10.08□□□□□ -0.8
USP16-203ENST00000399975 ANKRD30BQ9BXX2 1392 aa10.08□□□□□ -0.8
USP16-203ENST00000399975 CLTCQ00610 1675 aaKnown RBP10.07□□□□□ -0.8
USP16-203ENST00000399975 CNTLNQ9NXG0 1405 aa10.07□□□□□ -0.8
USP16-203ENST00000399975 TRPM2O94759 1503 aa10.07□□□□□ -0.8
USP16-203ENST00000399975 ADAMTSL3P82987 1691 aa10.07□□□□□ -0.8
USP16-203ENST00000399975 SLC4A1APQ9BWU0 796 aaKnown RBP10.07□□□□□ -0.8
USP16-203ENST00000399975 CCER1Q8TC90 406 aaPredicted RBP10.06□□□□□ -0.8
USP16-203ENST00000399975 FER1L4A9Z1Z3 1794 aa10.05□□□□□ -0.8
USP16-203ENST00000399975 PREX1Q8TCU6 1659 aa10.05□□□□□ -0.8
USP16-203ENST00000399975 PIK3C2BO00750 1634 aa10.04□□□□□ -0.8
USP16-203ENST00000399975 PLA2R1Q13018 1463 aa10.04□□□□□ -0.8
USP16-203ENST00000399975 PKD2Q13563 968 aa10.04□□□□□ -0.8
USP16-203ENST00000399975 NOS1P29475 1434 aa10.04□□□□□ -0.8
USP16-203ENST00000399975 SPATA31D1Q6ZQQ2 1576 aa10.04□□□□□ -0.8
USP16-203ENST00000399975 ZEB1P37275 1124 aaPredicted RBP10.03□□□□□ -0.8
USP16-203ENST00000399975 TIMELESSQ9UNS1 1208 aa10.03□□□□□ -0.8
USP16-203ENST00000399975 NPATQ14207 1427 aa10.03□□□□□ -0.8
USP16-203ENST00000399975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.03□□□□□ -0.83e-8■□□□□ 10.7
USP16-203ENST00000399975 WASHC2CQ9Y4E1 1318 aa10.02□□□□□ -0.81
USP16-203ENST00000399975 GGT6Q6P531 493 aa10.02□□□□□ -0.81
USP16-203ENST00000399975 CLTCL1P53675 1640 aa10.01□□□□□ -0.81
USP16-203ENST00000399975 SYNMO15061 1565 aa10.01□□□□□ -0.81
USP16-203ENST00000399975 KDM5AP29375 1690 aaKnown RBP10.01□□□□□ -0.81
USP16-203ENST00000399975 C3P01024 1663 aa10.01□□□□□ -0.81
USP16-203ENST00000399975 ERVK-7P63135 1459 aa10.01□□□□□ -0.81
USP16-203ENST00000399975 KIF1BO60333 1816 aa10□□□□□ -0.81
USP16-203ENST00000399975 MADDQ8WXG6 1647 aa9.99□□□□□ -0.81
USP16-203ENST00000399975 RIMS1Q86UR5 1692 aaKnown RBP9.98□□□□□ -0.81
USP16-203ENST00000399975 ZMYM3Q14202 1370 aa9.98□□□□□ -0.81
USP16-203ENST00000399975 CCDC144AA2RUR9 1427 aa9.97□□□□□ -0.81
USP16-203ENST00000399975 IFT172Q9UG01 1749 aa9.97□□□□□ -0.81
USP16-203ENST00000399975 ADGRB3O60242 1522 aa9.97□□□□□ -0.81
USP16-203ENST00000399975 ARID4BQ4LE39 1312 aaPredicted RBP9.97□□□□□ -0.81
USP16-203ENST00000399975 SPATA31E1Q6ZUB1 1445 aa9.97□□□□□ -0.81
USP16-203ENST00000399975 FOXD1Q16676 465 aa9.96□□□□□ -0.81
USP16-203ENST00000399975 TMEM131LA2VDJ0 1609 aa9.95□□□□□ -0.82
USP16-203ENST00000399975 SIN3AQ96ST3 1273 aa9.94□□□□□ -0.82
USP16-203ENST00000399975 SLC52A1Q9NWF4 448 aa9.94□□□□□ -0.82
USP16-203ENST00000399975 ZNF142P52746 1687 aaPredicted RBP9.94□□□□□ -0.82
USP16-203ENST00000399975 NLRP1Q9C000 1473 aa9.94□□□□□ -0.82
USP16-203ENST00000399975 CFAP65Q6ZU64 1925 aaKnown RBP9.94□□□□□ -0.82
USP16-203ENST00000399975 STAC3Q96MF2 364 aa9.93□□□□□ -0.82
USP16-203ENST00000399975 ESF1Q9H501 851 aaKnown RBP9.93□□□□□ -0.82
USP16-203ENST00000399975 PPLO60437 1756 aa9.93□□□□□ -0.82
USP16-203ENST00000399975 UHRF1BP1Q6BDS2 1440 aa9.93□□□□□ -0.82
USP16-203ENST00000399975 UGGT1Q9NYU2 1555 aa9.93□□□□□ -0.82
USP16-203ENST00000399975 MLECQ14165 292 aa9.93□□□□□ -0.82
USP16-203ENST00000399975 UBR1Q8IWV7 1749 aa9.92□□□□□ -0.82
USP16-203ENST00000399975 MYO3AQ8NEV4 1616 aa9.92□□□□□ -0.82
USP16-203ENST00000399975 TNRQ92752 1358 aa9.92□□□□□ -0.82
USP16-203ENST00000399975 TONSLQ96HA7 1378 aa9.92□□□□□ -0.82
USP16-203ENST00000399975 MYOM2P54296 1465 aa9.91□□□□□ -0.82
USP16-203ENST00000399975 MYO5BQ9ULV0 1848 aa9.91□□□□□ -0.82
USP16-203ENST00000399975 KIAA1210Q9ULL0 1709 aa9.91□□□□□ -0.82
USP16-203ENST00000399975 RPGRIP1LQ68CZ1 1315 aa9.91□□□□□ -0.82
USP16-203ENST00000399975 PTPRMP28827 1452 aa9.9□□□□□ -0.82
USP16-203ENST00000399975 NRXN1Q9ULB1 1477 aa9.9□□□□□ -0.82
USP16-203ENST00000399975 ZFYVE9O95405 1425 aa9.9□□□□□ -0.83
USP16-203ENST00000399975 NEXMIFQ5QGS0 1516 aa9.89□□□□□ -0.83
USP16-203ENST00000399975 SETD1BQ9UPS6 1966 aaKnown RBP9.89□□□□□ -0.83
USP16-203ENST00000399975 PPP1R15AO75807 674 aaPredicted RBP9.89□□□□□ -0.83
USP16-203ENST00000399975 NEUROD1Q13562 356 aa9.89□□□□□ -0.83
USP16-203ENST00000399975 FBXO31Q5XUX0 539 aaPredicted RBP9.89□□□□□ -0.83
USP16-203ENST00000399975 A2ML1A8K2U0 1454 aa9.88□□□□□ -0.83
USP16-203ENST00000399975 LAMC1P11047 1609 aa9.88□□□□□ -0.83
USP16-203ENST00000399975 L3MBTL2Q969R5 705 aa9.88□□□□□ -0.83
USP16-203ENST00000399975 IDI1Q13907 227 aa9.87□□□□□ -0.83
USP16-203ENST00000399975 TRPM1Q7Z4N2 1603 aa9.87□□□□□ -0.83
USP16-203ENST00000399975 SLIT1O75093 1534 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms