RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 RIMS1Q86UR5 1692 aaKnown RBP26.75■■□□□ 1.87
CTNS-203ENST00000399306 PTPRMP28827 1452 aa26.74■■□□□ 1.87
CTNS-203ENST00000399306 MROH2AA6NES4 1674 aa26.74■■□□□ 1.87
CTNS-203ENST00000399306 GGT6Q6P531 493 aa26.74■■□□□ 1.87
CTNS-203ENST00000399306 DEPDC5O75140 1603 aa26.74■■□□□ 1.87
CTNS-203ENST00000399306 ESF1Q9H501 851 aaKnown RBP26.73■■□□□ 1.87
CTNS-203ENST00000399306 KDM5DQ9BY66 1539 aa26.72■■□□□ 1.87
CTNS-203ENST00000399306 PRDM15P57071 1507 aaPredicted RBP26.71■■□□□ 1.87
CTNS-203ENST00000399306 MROH1Q8NDA8 1641 aa26.7■■□□□ 1.86
CTNS-203ENST00000399306 HFM1A2PYH4 1435 aa26.7■■□□□ 1.86
CTNS-203ENST00000399306 ZC3H13Q5T200 1668 aaKnown RBP26.7■■□□□ 1.86
CTNS-203ENST00000399306 GCC2Q8IWJ2 1684 aa26.68■■□□□ 1.86
CTNS-203ENST00000399306 NAIPQ13075 1403 aa26.66■■□□□ 1.86
CTNS-203ENST00000399306 CLTCQ00610 1675 aaKnown RBP26.65■■□□□ 1.86
CTNS-203ENST00000399306 WASHC2CQ9Y4E1 1318 aa26.64■■□□□ 1.85
CTNS-203ENST00000399306 VWDEQ8N2E2 1590 aa26.63■■□□□ 1.85
CTNS-203ENST00000399306 KANK1Q14678 1352 aa26.63■■□□□ 1.85
CTNS-203ENST00000399306 AEBP2Q6ZN18 517 aaPredicted RBP26.63■■□□□ 1.85
CTNS-203ENST00000399306 UNC13BO14795 1591 aa26.63■■□□□ 1.85
CTNS-203ENST00000399306 ZMYM3Q14202 1370 aa26.62■■□□□ 1.85
CTNS-203ENST00000399306 ABCC3O15438 1527 aa26.62■■□□□ 1.85
CTNS-203ENST00000399306 C3P01024 1663 aa26.62■■□□□ 1.85
CTNS-203ENST00000399306 SETD1BQ9UPS6 1966 aaKnown RBP26.62■■□□□ 1.85
CTNS-203ENST00000399306 LMTK2Q8IWU2 1503 aa26.61■■□□□ 1.85
CTNS-203ENST00000399306 ACIN1Q9UKV3 1341 aaKnown RBP26.6■■□□□ 1.85
CTNS-203ENST00000399306 NPATQ14207 1427 aa26.57■■□□□ 1.84
CTNS-203ENST00000399306 ARHGAP31Q2M1Z3 1444 aa26.56■■□□□ 1.84
CTNS-203ENST00000399306 PZPP20742 1482 aa26.55■■□□□ 1.84
CTNS-203ENST00000399306 CEP152O94986 1710 aa26.54■■□□□ 1.84
CTNS-203ENST00000399306 CAMSAP1Q5T5Y3 1602 aa26.53■■□□□ 1.84
CTNS-203ENST00000399306 IQGAP3Q86VI3 1631 aa26.51■■□□□ 1.83
CTNS-203ENST00000399306 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.51■■□□□ 1.83
CTNS-203ENST00000399306 CEBPAP49715 358 aaPredicted RBP26.49■■□□□ 1.83
CTNS-203ENST00000399306 TET3O43151 1660 aa26.48■■□□□ 1.83
CTNS-203ENST00000399306 SETD5Q9C0A6 1442 aa26.48■■□□□ 1.83
CTNS-203ENST00000399306 EFCAB6Q5THR3 1501 aa26.47■■□□□ 1.83
CTNS-203ENST00000399306 NUP155O75694 1391 aa26.46■■□□□ 1.83
CTNS-203ENST00000399306 RPRD2Q5VT52 1461 aaKnown RBP26.46■■□□□ 1.83
CTNS-203ENST00000399306 PREX1Q8TCU6 1659 aa26.44■■□□□ 1.82
CTNS-203ENST00000399306 HRCP23327 699 aa26.44■■□□□ 1.82
CTNS-203ENST00000399306 SPATA31D1Q6ZQQ2 1576 aa26.43■■□□□ 1.82
CTNS-203ENST00000399306 TRIM26Q12899 539 aaPredicted RBP26.4■■□□□ 1.82
CTNS-203ENST00000399306 ERVK-7P63135 1459 aa26.4■■□□□ 1.82
CTNS-203ENST00000399306 UHRF1BP1Q6BDS2 1440 aa26.39■■□□□ 1.81
CTNS-203ENST00000399306 TNRQ92752 1358 aa26.38■■□□□ 1.81
CTNS-203ENST00000399306 PLPPR3Q6T4P5 718 aa26.37■■□□□ 1.81
CTNS-203ENST00000399306 FBXO31Q5XUX0 539 aaPredicted RBP26.36■■□□□ 1.81
CTNS-203ENST00000399306 LMTK3Q96Q04 1460 aa26.36■■□□□ 1.81
CTNS-203ENST00000399306 NLRP1Q9C000 1473 aa26.36■■□□□ 1.81
CTNS-203ENST00000399306 RAB3GAP2Q9H2M9 1393 aa26.35■■□□□ 1.81
CTNS-203ENST00000399306 CFAP65Q6ZU64 1925 aaKnown RBP26.34■■□□□ 1.81
CTNS-203ENST00000399306 NOS1P29475 1434 aa26.34■■□□□ 1.81
CTNS-203ENST00000399306 MYO3AQ8NEV4 1616 aa26.34■■□□□ 1.81
CTNS-203ENST00000399306 E9PCH4 1651 aa26.34■■□□□ 1.81
CTNS-203ENST00000399306 ZNF142P52746 1687 aaPredicted RBP26.34■■□□□ 1.81
CTNS-203ENST00000399306 TRIM52Q96A61 297 aa26.32■■□□□ 1.8
CTNS-203ENST00000399306 A2ML1A8K2U0 1454 aa26.3■■□□□ 1.8
CTNS-203ENST00000399306 CEP170BQ9Y4F5 1589 aaPredicted RBP26.29■■□□□ 1.8
CTNS-203ENST00000399306 SLC52A1Q9NWF4 448 aa26.26■■□□□ 1.79
CTNS-203ENST00000399306 PTPRTO14522 1441 aa26.25■■□□□ 1.79
CTNS-203ENST00000399306 SLC4A1APQ9BWU0 796 aaKnown RBP26.25■■□□□ 1.79
CTNS-203ENST00000399306 SYNMO15061 1565 aa26.24■■□□□ 1.79
CTNS-203ENST00000399306 KDM5AP29375 1690 aaKnown RBP26.24■■□□□ 1.79
CTNS-203ENST00000399306 SPHKAPQ2M3C7 1700 aa26.22■■□□□ 1.79
CTNS-203ENST00000399306 MPHOSPH9Q99550 1183 aa26.21■■□□□ 1.79
CTNS-203ENST00000399306 PIK3C2BO00750 1634 aa26.21■■□□□ 1.79
CTNS-203ENST00000399306 PKD2Q13563 968 aa26.2■■□□□ 1.78
CTNS-203ENST00000399306 UGGT1Q9NYU2 1555 aa26.19■■□□□ 1.78
CTNS-203ENST00000399306 PLA2R1Q13018 1463 aa26.18■■□□□ 1.78
CTNS-203ENST00000399306 THEMISQ8N1K5 641 aaPredicted RBP26.17■■□□□ 1.78
CTNS-203ENST00000399306 TRPM2O94759 1503 aa26.16■■□□□ 1.78
CTNS-203ENST00000399306 IDI1Q13907 227 aa26.16■■□□□ 1.78
CTNS-203ENST00000399306 UBR1Q8IWV7 1749 aa26.15■■□□□ 1.78
CTNS-203ENST00000399306 ADGRB3O60242 1522 aa26.12■■□□□ 1.77
CTNS-203ENST00000399306 HSPA2P54652 639 aa26.11■■□□□ 1.77
CTNS-203ENST00000399306 SLIT1O75093 1534 aa26.08■■□□□ 1.77
CTNS-203ENST00000399306 ARHGAP23Q9P227 1491 aa26.07■■□□□ 1.76
CTNS-203ENST00000399306 STRCQ7RTU9 1775 aa26.07■■□□□ 1.76
CTNS-203ENST00000399306 TMEM131LA2VDJ0 1609 aa26.06■■□□□ 1.76
CTNS-203ENST00000399306 STAG3Q9UJ98 1225 aa26.05■■□□□ 1.76
CTNS-203ENST00000399306 CLTCL1P53675 1640 aa26.04■■□□□ 1.76
CTNS-203ENST00000399306 DMRT2Q9Y5R5 561 aa26.04■■□□□ 1.76
CTNS-203ENST00000399306 TMEM2Q9UHN6 1383 aa26.02■■□□□ 1.76
CTNS-203ENST00000399306 POLR1AO95602 1720 aaPredicted RBP26.02■■□□□ 1.76
CTNS-203ENST00000399306 KIF1BO60333 1816 aa26.02■■□□□ 1.76
CTNS-203ENST00000399306 ANKLE2Q86XL3 938 aa26.01■■□□□ 1.75
CTNS-203ENST00000399306 NEURL4Q96JN8 1562 aa26■■□□□ 1.75
CTNS-203ENST00000399306 CCDC144AA2RUR9 1427 aa26■■□□□ 1.75
CTNS-203ENST00000399306 MED14O60244 1454 aa25.99■■□□□ 1.75
CTNS-203ENST00000399306 ANKRD30BQ9BXX2 1392 aa25.99■■□□□ 1.75
CTNS-203ENST00000399306 FOXD1Q16676 465 aa25.99■■□□□ 1.75
CTNS-203ENST00000399306 MYO5BQ9ULV0 1848 aa25.99■■□□□ 1.75
CTNS-203ENST00000399306 HDGFP51858 240 aaKnown RBP25.98■■□□□ 1.75
CTNS-203ENST00000399306 EID1Q9Y6B2 187 aa25.96■■□□□ 1.75
CTNS-203ENST00000399306 SCAF11Q99590 1463 aaKnown RBP25.96■■□□□ 1.75
CTNS-203ENST00000399306 ZFYVE9O95405 1425 aa25.95■■□□□ 1.74
CTNS-203ENST00000399306 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.93■■□□□ 1.74
CTNS-203ENST00000399306 NCKAP5LQ9HCH0 1330 aa25.92■■□□□ 1.74
CTNS-203ENST00000399306 CHGAP10645 457 aaKnown RBP25.92■■□□□ 1.74
CTNS-203ENST00000399306 PCGF6Q9BYE7 350 aa25.92■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms