RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 RTN4Q9NQC3 1192 aaKnown RBP18.63■□□□□ 0.57
APOB-202ENST00000399256 TROQ12816 1431 aaPredicted RBP18.63■□□□□ 0.57
APOB-202ENST00000399256 MYBBP1AQ9BQG0 1328 aaKnown RBP18.63■□□□□ 0.57
APOB-202ENST00000399256 ZNF777Q9ULD5 760 aaPredicted RBP18.62■□□□□ 0.57
APOB-202ENST00000399256 BRD4O60885 1362 aaPredicted RBP18.61■□□□□ 0.57
APOB-202ENST00000399256 UHRF1BP1LA0JNW5 1464 aa18.61■□□□□ 0.57
APOB-202ENST00000399256 PRKCSHP14314 528 aaPredicted RBP18.61■□□□□ 0.57
APOB-202ENST00000399256 ADCY10Q96PN6 1610 aa18.61■□□□□ 0.57
APOB-202ENST00000399256 ST20-MTHFSA0A0A6YYL1 179 aa18.6■□□□□ 0.57
APOB-202ENST00000399256 BACH2Q9BYV9 841 aa18.6■□□□□ 0.57
APOB-202ENST00000399256 KDM2AQ9Y2K7 1162 aa18.6■□□□□ 0.57
APOB-202ENST00000399256 CAMSAP2Q08AD1 1489 aa18.59■□□□□ 0.57
APOB-202ENST00000399256 CFDP1Q9UEE9 299 aaPredicted RBP18.59■□□□□ 0.57
APOB-202ENST00000399256 RALGAPBQ86X10 1494 aa18.58■□□□□ 0.57
APOB-202ENST00000399256 RALBP1Q15311 655 aa18.58■□□□□ 0.56
APOB-202ENST00000399256 SKAP1Q86WV1 359 aa18.57■□□□□ 0.56
APOB-202ENST00000399256 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
APOB-202ENST00000399256 UHRF1BP1Q6BDS2 1440 aa18.55■□□□□ 0.56
APOB-202ENST00000399256 PLIN1O60240 522 aa18.55■□□□□ 0.56
APOB-202ENST00000399256 ZCCHC11Q5TAX3 1644 aaKnown RBP18.55■□□□□ 0.56
APOB-202ENST00000399256 PLEKHD1A6NEE1 506 aa18.55■□□□□ 0.56
APOB-202ENST00000399256 MS4A1P11836 297 aa18.54■□□□□ 0.56
APOB-202ENST00000399256 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
APOB-202ENST00000399256 USP35Q9P2H5 1018 aa18.53■□□□□ 0.56
APOB-202ENST00000399256 KTN1Q86UP2 1357 aaKnown RBP18.52■□□□□ 0.56
APOB-202ENST00000399256 DCAF11Q8TEB1 546 aa18.52■□□□□ 0.55
APOB-202ENST00000399256 NUP155O75694 1391 aa18.51■□□□□ 0.55
APOB-202ENST00000399256 ANKRD30AQ9BXX3 1397 aa18.51■□□□□ 0.55
APOB-202ENST00000399256 PPM1GO15355 546 aaPredicted RBP18.51■□□□□ 0.55
APOB-202ENST00000399256 NLRP13Q86W25 1043 aa18.51■□□□□ 0.55
APOB-202ENST00000399256 ANKRD50Q9ULJ7 1429 aa18.5■□□□□ 0.55
APOB-202ENST00000399256 PDE3BQ13370 1112 aa18.5■□□□□ 0.55
APOB-202ENST00000399256 ABCC10Q5T3U5 1492 aa18.5■□□□□ 0.55
APOB-202ENST00000399256 ADGRL2O95490 1459 aa18.49■□□□□ 0.55
APOB-202ENST00000399256 CRBNQ96SW2 442 aa18.49■□□□□ 0.55
APOB-202ENST00000399256 ITSN2Q9NZM3 1697 aa18.49■□□□□ 0.55
APOB-202ENST00000399256 GPATCH8Q9UKJ3 1502 aaKnown RBP18.49■□□□□ 0.55
APOB-202ENST00000399256 E9PCH4 1651 aa18.48■□□□□ 0.55
APOB-202ENST00000399256 PARD3Q8TEW0 1356 aa18.46■□□□□ 0.55
APOB-202ENST00000399256 ARHGEF12Q9NZN5 1544 aa18.46■□□□□ 0.55
APOB-202ENST00000399256 CROCC2H7BZ55 1655 aa18.46■□□□□ 0.55
APOB-202ENST00000399256 CDC42BPAQ5VT25 1732 aa18.46■□□□□ 0.55
APOB-202ENST00000399256 WASHC2CQ9Y4E1 1318 aa18.46■□□□□ 0.55
APOB-202ENST00000399256 SLC4A3P48751 1232 aa18.44■□□□□ 0.54
APOB-202ENST00000399256 CC2D1BQ5T0F9 858 aaKnown RBP18.44■□□□□ 0.54
APOB-202ENST00000399256 DDRGK1Q96HY6 314 aa18.44■□□□□ 0.54
APOB-202ENST00000399256 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.42■□□□□ 0.54
APOB-202ENST00000399256 RIMBP3CA6NJZ7 1639 aa18.42■□□□□ 0.54
APOB-202ENST00000399256 RIMBP3BA6NNM3 1639 aa18.42■□□□□ 0.54
APOB-202ENST00000399256 RIMBP3Q9UFD9 1639 aa18.42■□□□□ 0.54
APOB-202ENST00000399256 TTC37Q6PGP7 1564 aa18.41■□□□□ 0.54
APOB-202ENST00000399256 C20orf194Q5TEA3 1177 aa18.41■□□□□ 0.54
APOB-202ENST00000399256 BRPF3Q9ULD4 1205 aa18.41■□□□□ 0.54
APOB-202ENST00000399256 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.41■□□□□ 0.54
APOB-202ENST00000399256 PER1O15534 1290 aaPredicted RBP18.39■□□□□ 0.53
APOB-202ENST00000399256 PREX2Q70Z35 1606 aa18.38■□□□□ 0.53
APOB-202ENST00000399256 NFKBIBQ15653 356 aa18.38■□□□□ 0.53
APOB-202ENST00000399256 GSE1Q14687 1217 aa18.38■□□□□ 0.53
APOB-202ENST00000399256 C9orf84Q5VXU9 1444 aa18.38■□□□□ 0.53
APOB-202ENST00000399256 NBPF1Q3BBV0 1214 aa18.37■□□□□ 0.53
APOB-202ENST00000399256 CDC42BPBQ9Y5S2 1711 aa18.37■□□□□ 0.53
APOB-202ENST00000399256 WDR7Q9Y4E6 1490 aa18.37■□□□□ 0.53
APOB-202ENST00000399256 BLMP54132 1417 aaPredicted RBP18.36■□□□□ 0.53
APOB-202ENST00000399256 RGL3Q3MIN7 710 aa18.36■□□□□ 0.53
APOB-202ENST00000399256 DAXXQ9UER7 740 aaPredicted RBP18.36■□□□□ 0.53
APOB-202ENST00000399256 MYO5CQ9NQX4 1742 aa18.34■□□□□ 0.53
APOB-202ENST00000399256 ASXL2Q76L83 1435 aa18.33■□□□□ 0.53
APOB-202ENST00000399256 PANK3Q9H999 370 aa18.33■□□□□ 0.53
APOB-202ENST00000399256 KDM5DQ9BY66 1539 aa18.33■□□□□ 0.52
APOB-202ENST00000399256 TSPY4P0CV99 314 aa18.33■□□□□ 0.52
APOB-202ENST00000399256 TSPY10P0CW01 314 aa18.33■□□□□ 0.52
APOB-202ENST00000399256 FRAT1Q92837 279 aaPredicted RBP18.33■□□□□ 0.52
APOB-202ENST00000399256 DISP3Q9P2K9 1392 aa18.33■□□□□ 0.52
APOB-202ENST00000399256 KDM2BQ8NHM5 1336 aa18.32■□□□□ 0.52
APOB-202ENST00000399256 PRAG1Q86YV5 1406 aa18.32■□□□□ 0.52
APOB-202ENST00000399256 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
APOB-202ENST00000399256 SAMD9LQ8IVG5 1584 aa18.3■□□□□ 0.52
APOB-202ENST00000399256 ZMYM4Q5VZL5 1548 aa18.3■□□□□ 0.52
APOB-202ENST00000399256 HNRNPMP52272 730 aaKnown RBP eCLIP18.3■□□□□ 0.52
APOB-202ENST00000399256 SHANK2Q9UPX8 1470 aa18.29■□□□□ 0.52
APOB-202ENST00000399256 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
APOB-202ENST00000399256 CENPQQ7L2Z9 268 aaPredicted RBP18.29■□□□□ 0.52
APOB-202ENST00000399256 ADAMTS8Q9UP79 889 aa18.29■□□□□ 0.52
APOB-202ENST00000399256 COL17A1Q9UMD9 1497 aaPredicted RBP18.29■□□□□ 0.52
APOB-202ENST00000399256 ARHGAP5Q13017 1502 aa18.29■□□□□ 0.52
APOB-202ENST00000399256 CYB5RLQ6IPT4 315 aa18.28■□□□□ 0.52
APOB-202ENST00000399256 FAM161AQ3B820 660 aa18.28■□□□□ 0.52
APOB-202ENST00000399256 C8orf34Q49A92 452 aa18.28■□□□□ 0.52
APOB-202ENST00000399256 TESK2Q96S53 571 aa18.27■□□□□ 0.52
APOB-202ENST00000399256 ABCA9Q8IUA7 1624 aa18.27■□□□□ 0.52
APOB-202ENST00000399256 CCDC144AA2RUR9 1427 aa18.27■□□□□ 0.52
APOB-202ENST00000399256 PLCH2O75038 1416 aa18.27■□□□□ 0.51
APOB-202ENST00000399256 PLEKHH2Q8IVE3 1493 aa18.27■□□□□ 0.51
APOB-202ENST00000399256 RGS3P49796 1198 aa18.26■□□□□ 0.51
APOB-202ENST00000399256 INSRP06213 1382 aa18.25■□□□□ 0.51
APOB-202ENST00000399256 PLEKHH1Q9ULM0 1364 aa18.25■□□□□ 0.51
APOB-202ENST00000399256 FAM135AQ9P2D6 1515 aa18.25■□□□□ 0.51
APOB-202ENST00000399256 ARHGEF5Q12774 1597 aa18.24■□□□□ 0.51
APOB-202ENST00000399256 ERBINQ96RT1 1412 aa18.24■□□□□ 0.51
APOB-202ENST00000399256 FRAT2O75474 233 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms