RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 ROCK1Q13464 1354 aa18.34■□□□□ 0.53
TOP3B-202ENST00000398793 STAG3Q9UJ98 1225 aa18.33■□□□□ 0.53
TOP3B-202ENST00000398793 CEBPAP49715 358 aaPredicted RBP18.33■□□□□ 0.52
TOP3B-202ENST00000398793 BCANQ96GW7 911 aa18.33■□□□□ 0.52
TOP3B-202ENST00000398793 ESF1Q9H501 851 aaKnown RBP18.33■□□□□ 0.52
TOP3B-202ENST00000398793 CARD11Q9BXL7 1154 aa18.32■□□□□ 0.52
TOP3B-202ENST00000398793 ANKRD30BQ9BXX2 1392 aa18.31■□□□□ 0.52
TOP3B-202ENST00000398793 YEATS2Q9ULM3 1422 aa18.31■□□□□ 0.52
TOP3B-202ENST00000398793 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
TOP3B-202ENST00000398793 PZPP20742 1482 aa18.29■□□□□ 0.52
TOP3B-202ENST00000398793 PREX2Q70Z35 1606 aa18.28■□□□□ 0.52
TOP3B-202ENST00000398793 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-202ENST00000398793 EIF4G2P78344 907 aaKnown RBP eCLIP18.26■□□□□ 0.51
TOP3B-202ENST00000398793 STK26Q9P289 416 aa18.25■□□□□ 0.51
TOP3B-202ENST00000398793 KIAA1107Q9UPP5 1409 aa18.24■□□□□ 0.51
TOP3B-202ENST00000398793 CCDC144AA2RUR9 1427 aa18.23■□□□□ 0.51
TOP3B-202ENST00000398793 TMEM132EQ6IEE7 984 aa18.23■□□□□ 0.51
TOP3B-202ENST00000398793 ST20-MTHFSA0A0A6YYL1 179 aa18.22■□□□□ 0.51
TOP3B-202ENST00000398793 KANK1Q14678 1352 aa18.21■□□□□ 0.51
TOP3B-202ENST00000398793 ABCC1P33527 1531 aa18.2■□□□□ 0.5
TOP3B-202ENST00000398793 COL17A1Q9UMD9 1497 aaPredicted RBP18.18■□□□□ 0.5
TOP3B-202ENST00000398793 CFAP70Q5T0N1 1121 aa18.18■□□□□ 0.5
TOP3B-202ENST00000398793 DNAJC5Q9H3Z4 198 aa18.17■□□□□ 0.5
TOP3B-202ENST00000398793 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
TOP3B-202ENST00000398793 FAM135AQ9P2D6 1515 aa18.16■□□□□ 0.5
TOP3B-202ENST00000398793 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
TOP3B-202ENST00000398793 TRAK1Q9UPV9 953 aa18.15■□□□□ 0.5
TOP3B-202ENST00000398793 UGGT1Q9NYU2 1555 aa18.15■□□□□ 0.5
TOP3B-202ENST00000398793 ADGRL2O95490 1459 aa18.14■□□□□ 0.49
TOP3B-202ENST00000398793 ATP7AQ04656 1500 aa18.14■□□□□ 0.49
TOP3B-202ENST00000398793 ROCK2O75116 1388 aaKnown RBP18.14■□□□□ 0.49
TOP3B-202ENST00000398793 PLEKHG5O94827 1062 aa18.14■□□□□ 0.49
TOP3B-202ENST00000398793 ZNF518AQ6AHZ1 1483 aa18.13■□□□□ 0.49
TOP3B-202ENST00000398793 IDI1Q13907 227 aa18.13■□□□□ 0.49
TOP3B-202ENST00000398793 GCC2Q8IWJ2 1684 aa18.12■□□□□ 0.49
TOP3B-202ENST00000398793 POGZQ7Z3K3 1410 aa18.12■□□□□ 0.49
TOP3B-202ENST00000398793 A2MP01023 1474 aa18.12■□□□□ 0.49
TOP3B-202ENST00000398793 WASHC2AQ641Q2 1341 aa18.11■□□□□ 0.49
TOP3B-202ENST00000398793 RBM19Q9Y4C8 960 aaKnown RBP18.11■□□□□ 0.49
TOP3B-202ENST00000398793 ADGRF5Q8IZF2 1346 aa18.11■□□□□ 0.49
TOP3B-202ENST00000398793 NUTM2FA1L443 756 aa18.1■□□□□ 0.49
TOP3B-202ENST00000398793 ABCA9Q8IUA7 1624 aa18.1■□□□□ 0.49
TOP3B-202ENST00000398793 RPRD2Q5VT52 1461 aaKnown RBP18.09■□□□□ 0.49
TOP3B-202ENST00000398793 SHANK2Q9UPX8 1470 aa18.08■□□□□ 0.49
TOP3B-202ENST00000398793 ARHGEF5Q12774 1597 aa18.07■□□□□ 0.48
TOP3B-202ENST00000398793 ZFYVE16Q7Z3T8 1539 aa18.07■□□□□ 0.48
TOP3B-202ENST00000398793 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
TOP3B-202ENST00000398793 RBM33Q96EV2 1170 aaKnown RBP18.07■□□□□ 0.48
TOP3B-202ENST00000398793 SALL2Q9Y467 1007 aaPredicted RBP18.07■□□□□ 0.48
TOP3B-202ENST00000398793 ANP32CO43423 234 aa18.06■□□□□ 0.48
TOP3B-202ENST00000398793 DUOX2Q9NRD8 1548 aa18.06■□□□□ 0.48
TOP3B-202ENST00000398793 USP47Q96K76 1375 aa18.05■□□□□ 0.48
TOP3B-202ENST00000398793 ADGBQ8N7X0 1667 aa18.05■□□□□ 0.48
TOP3B-202ENST00000398793 TIMELESSQ9UNS1 1208 aa18.05■□□□□ 0.48
TOP3B-202ENST00000398793 CROCC2H7BZ55 1655 aa18.05■□□□□ 0.48
TOP3B-202ENST00000398793 FAM9BQ8IZU0 186 aa18.05■□□□□ 0.48
TOP3B-202ENST00000398793 TMC1Q8TDI8 760 aa18.03■□□□□ 0.48
TOP3B-202ENST00000398793 CCDC184Q52MB2 194 aa18.02■□□□□ 0.48
TOP3B-202ENST00000398793 CC2D1BQ5T0F9 858 aaKnown RBP18.02■□□□□ 0.48
TOP3B-202ENST00000398793 TNNT2P45379 298 aaPredicted RBP18.02■□□□□ 0.47
TOP3B-202ENST00000398793 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
TOP3B-202ENST00000398793 MSH5O43196 834 aa18■□□□□ 0.47
TOP3B-202ENST00000398793 ERBINQ96RT1 1412 aa17.99■□□□□ 0.47
TOP3B-202ENST00000398793 DIP2BQ9P265 1576 aa17.99■□□□□ 0.47
TOP3B-202ENST00000398793 KIDINS220Q9ULH0 1771 aa17.97■□□□□ 0.47
TOP3B-202ENST00000398793 SLC26A8Q96RN1 970 aa17.97■□□□□ 0.47
TOP3B-202ENST00000398793 RTEL1-TNFRSF6BF6WH68 1400 aa17.97■□□□□ 0.47
TOP3B-202ENST00000398793 TEX14Q8IWB6 1497 aa17.97■□□□□ 0.47
TOP3B-202ENST00000398793 NPATQ14207 1427 aa17.96■□□□□ 0.47
TOP3B-202ENST00000398793 FKBP8Q14318 412 aa17.95■□□□□ 0.46
TOP3B-202ENST00000398793 NEO1Q92859 1461 aa17.93■□□□□ 0.46
TOP3B-202ENST00000398793 MINK1Q8N4C8 1332 aaPredicted RBP17.93■□□□□ 0.46
TOP3B-202ENST00000398793 NOS1P29475 1434 aa17.92■□□□□ 0.46
TOP3B-202ENST00000398793 ATP10AO60312 1499 aa17.92■□□□□ 0.46
TOP3B-202ENST00000398793 DEKP35659 375 aaKnown RBP17.92■□□□□ 0.46
TOP3B-202ENST00000398793 ABCA6Q8N139 1617 aa17.9■□□□□ 0.46
TOP3B-202ENST00000398793 PRDM15P57071 1507 aaPredicted RBP17.9■□□□□ 0.46
TOP3B-202ENST00000398793 WAPLQ7Z5K2 1190 aa17.9■□□□□ 0.46
TOP3B-202ENST00000398793 MRS2Q9HD23 443 aa17.89■□□□□ 0.45
TOP3B-202ENST00000398793 POGKQ9P215 609 aa17.89■□□□□ 0.45
TOP3B-202ENST00000398793 HECW2Q9P2P5 1572 aa17.89■□□□□ 0.45
TOP3B-202ENST00000398793 MLH3Q9UHC1 1453 aa17.88■□□□□ 0.45
TOP3B-202ENST00000398793 CCDC136Q96JN2 1154 aa17.87■□□□□ 0.45
TOP3B-202ENST00000398793 CCDC7Q96M83 1385 aa17.86■□□□□ 0.45
TOP3B-202ENST00000398793 TXNDC2Q86VQ3 553 aa17.86■□□□□ 0.45
TOP3B-202ENST00000398793 PANK3Q9H999 370 aa17.86■□□□□ 0.45
TOP3B-202ENST00000398793 CABP2Q9NPB3 220 aa17.86■□□□□ 0.45
TOP3B-202ENST00000398793 FRMPD1Q5SYB0 1578 aa17.86■□□□□ 0.45
TOP3B-202ENST00000398793 MAST1Q9Y2H9 1570 aa17.86■□□□□ 0.45
TOP3B-202ENST00000398793 SOX12O15370 315 aa17.85■□□□□ 0.45
TOP3B-202ENST00000398793 ZMYM3Q14202 1370 aa17.85■□□□□ 0.45
TOP3B-202ENST00000398793 INO80Q9ULG1 1556 aaPredicted RBP17.85■□□□□ 0.45
TOP3B-202ENST00000398793 SRPK2P78362 688 aaKnown RBP17.85■□□□□ 0.45
TOP3B-202ENST00000398793 HNRNPUQ00839 825 aaKnown RBP eCLIP17.84■□□□□ 0.45
TOP3B-202ENST00000398793 CEP152O94986 1710 aa17.84■□□□□ 0.45
TOP3B-202ENST00000398793 PLXNC1O60486 1568 aa17.84■□□□□ 0.45
TOP3B-202ENST00000398793 DIP2CQ9Y2E4 1556 aa17.83■□□□□ 0.44
TOP3B-202ENST00000398793 DISP3Q9P2K9 1392 aa17.82■□□□□ 0.44
TOP3B-202ENST00000398793 MAP3K4Q9Y6R4 1608 aa17.82■□□□□ 0.44
TOP3B-202ENST00000398793 E9PCH4 1651 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms