RNA–Protein interactions for RNA: ENST00000398793.6

TOP3B-202, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 3,107 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-202ENST00000398793 ROCK1Q13464 1354 aa18.34■□□□□ 0.53
TOP3B-202ENST00000398793 STAG3Q9UJ98 1225 aa18.33■□□□□ 0.53
TOP3B-202ENST00000398793 CEBPAP49715 358 aaPredicted RBP18.33■□□□□ 0.52
TOP3B-202ENST00000398793 BCANQ96GW7 911 aa18.33■□□□□ 0.52
TOP3B-202ENST00000398793 ESF1Q9H501 851 aaKnown RBP18.33■□□□□ 0.52
TOP3B-202ENST00000398793 CARD11Q9BXL7 1154 aa18.32■□□□□ 0.52
TOP3B-202ENST00000398793 ANKRD30BQ9BXX2 1392 aa18.31■□□□□ 0.52
TOP3B-202ENST00000398793 YEATS2Q9ULM3 1422 aa18.31■□□□□ 0.52
TOP3B-202ENST00000398793 MYO5CQ9NQX4 1742 aa18.3■□□□□ 0.52
TOP3B-202ENST00000398793 PZPP20742 1482 aa18.29■□□□□ 0.52
TOP3B-202ENST00000398793 PREX2Q70Z35 1606 aa18.28■□□□□ 0.52
TOP3B-202ENST00000398793 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
TOP3B-202ENST00000398793 EIF4G2P78344 907 aaKnown RBP eCLIP18.26■□□□□ 0.51
TOP3B-202ENST00000398793 STK26Q9P289 416 aa18.25■□□□□ 0.51
TOP3B-202ENST00000398793 KIAA1107Q9UPP5 1409 aa18.24■□□□□ 0.51
TOP3B-202ENST00000398793 CCDC144AA2RUR9 1427 aa18.23■□□□□ 0.51
TOP3B-202ENST00000398793 TMEM132EQ6IEE7 984 aa18.23■□□□□ 0.51
TOP3B-202ENST00000398793 ST20-MTHFSA0A0A6YYL1 179 aa18.22■□□□□ 0.51
TOP3B-202ENST00000398793 KANK1Q14678 1352 aa18.21■□□□□ 0.51
TOP3B-202ENST00000398793 ABCC1P33527 1531 aa18.2■□□□□ 0.5
TOP3B-202ENST00000398793 COL17A1Q9UMD9 1497 aaPredicted RBP18.18■□□□□ 0.5
TOP3B-202ENST00000398793 CFAP70Q5T0N1 1121 aa18.18■□□□□ 0.5
TOP3B-202ENST00000398793 DNAJC5Q9H3Z4 198 aa18.17■□□□□ 0.5
TOP3B-202ENST00000398793 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
TOP3B-202ENST00000398793 FAM135AQ9P2D6 1515 aa18.16■□□□□ 0.5
TOP3B-202ENST00000398793 ANO8Q9HCE9 1232 aaPredicted RBP18.16■□□□□ 0.5
TOP3B-202ENST00000398793 TRAK1Q9UPV9 953 aa18.15■□□□□ 0.5
TOP3B-202ENST00000398793 UGGT1Q9NYU2 1555 aa18.15■□□□□ 0.5
TOP3B-202ENST00000398793 ADGRL2O95490 1459 aa18.14■□□□□ 0.49
TOP3B-202ENST00000398793 ATP7AQ04656 1500 aa18.14■□□□□ 0.49
TOP3B-202ENST00000398793 ROCK2O75116 1388 aaKnown RBP18.14■□□□□ 0.49
TOP3B-202ENST00000398793 PLEKHG5O94827 1062 aa18.14■□□□□ 0.49
TOP3B-202ENST00000398793 ZNF518AQ6AHZ1 1483 aa18.13■□□□□ 0.49
TOP3B-202ENST00000398793 IDI1Q13907 227 aa18.13■□□□□ 0.49
TOP3B-202ENST00000398793 GCC2Q8IWJ2 1684 aa18.12■□□□□ 0.49
TOP3B-202ENST00000398793 POGZQ7Z3K3 1410 aa18.12■□□□□ 0.49
TOP3B-202ENST00000398793 A2MP01023 1474 aa18.12■□□□□ 0.49
TOP3B-202ENST00000398793 WASHC2AQ641Q2 1341 aa18.11■□□□□ 0.49
TOP3B-202ENST00000398793 RBM19Q9Y4C8 960 aaKnown RBP18.11■□□□□ 0.49
TOP3B-202ENST00000398793 ADGRF5Q8IZF2 1346 aa18.11■□□□□ 0.49
TOP3B-202ENST00000398793 NUTM2FA1L443 756 aa18.1■□□□□ 0.49
TOP3B-202ENST00000398793 ABCA9Q8IUA7 1624 aa18.1■□□□□ 0.49
TOP3B-202ENST00000398793 RPRD2Q5VT52 1461 aaKnown RBP18.09■□□□□ 0.49
TOP3B-202ENST00000398793 SHANK2Q9UPX8 1470 aa18.08■□□□□ 0.49
TOP3B-202ENST00000398793 ARHGEF5Q12774 1597 aa18.07■□□□□ 0.48
TOP3B-202ENST00000398793 ZFYVE16Q7Z3T8 1539 aa18.07■□□□□ 0.48
TOP3B-202ENST00000398793 PLA2R1Q13018 1463 aa18.07■□□□□ 0.48
TOP3B-202ENST00000398793 RBM33Q96EV2 1170 aaKnown RBP18.07■□□□□ 0.48
TOP3B-202ENST00000398793 SALL2Q9Y467 1007 aaPredicted RBP18.07■□□□□ 0.48
TOP3B-202ENST00000398793 ANP32CO43423 234 aa18.06■□□□□ 0.48
TOP3B-202ENST00000398793 DUOX2Q9NRD8 1548 aa18.06■□□□□ 0.48
TOP3B-202ENST00000398793 USP47Q96K76 1375 aa18.05■□□□□ 0.48
TOP3B-202ENST00000398793 ADGBQ8N7X0 1667 aa18.05■□□□□ 0.48
TOP3B-202ENST00000398793 TIMELESSQ9UNS1 1208 aa18.05■□□□□ 0.48
TOP3B-202ENST00000398793 CROCC2H7BZ55 1655 aa18.05■□□□□ 0.48
TOP3B-202ENST00000398793 FAM9BQ8IZU0 186 aa18.05■□□□□ 0.48
TOP3B-202ENST00000398793 TMC1Q8TDI8 760 aa18.03■□□□□ 0.48
TOP3B-202ENST00000398793 CCDC184Q52MB2 194 aa18.02■□□□□ 0.48
TOP3B-202ENST00000398793 CC2D1BQ5T0F9 858 aaKnown RBP18.02■□□□□ 0.48
TOP3B-202ENST00000398793 TNNT2P45379 298 aaPredicted RBP18.02■□□□□ 0.47
TOP3B-202ENST00000398793 KIF7Q2M1P5 1343 aa18.01■□□□□ 0.47
TOP3B-202ENST00000398793 MSH5O43196 834 aa18■□□□□ 0.47
TOP3B-202ENST00000398793 ERBINQ96RT1 1412 aa17.99■□□□□ 0.47
TOP3B-202ENST00000398793 DIP2BQ9P265 1576 aa17.99■□□□□ 0.47
TOP3B-202ENST00000398793 KIDINS220Q9ULH0 1771 aa17.97■□□□□ 0.47
TOP3B-202ENST00000398793 SLC26A8Q96RN1 970 aa17.97■□□□□ 0.47
TOP3B-202ENST00000398793 RTEL1-TNFRSF6BF6WH68 1400 aa17.97■□□□□ 0.47
TOP3B-202ENST00000398793 TEX14Q8IWB6 1497 aa17.97■□□□□ 0.47
TOP3B-202ENST00000398793 NPATQ14207 1427 aa17.96■□□□□ 0.47
TOP3B-202ENST00000398793 FKBP8Q14318 412 aa17.95■□□□□ 0.46
TOP3B-202ENST00000398793 NEO1Q92859 1461 aa17.93■□□□□ 0.46
TOP3B-202ENST00000398793 MINK1Q8N4C8 1332 aaPredicted RBP17.93■□□□□ 0.46
TOP3B-202ENST00000398793 NOS1P29475 1434 aa17.92■□□□□ 0.46
TOP3B-202ENST00000398793 ATP10AO60312 1499 aa17.92■□□□□ 0.46
TOP3B-202ENST00000398793 DEKP35659 375 aaKnown RBP17.92■□□□□ 0.46
TOP3B-202ENST00000398793 ABCA6Q8N139 1617 aa17.9■□□□□ 0.46
TOP3B-202ENST00000398793 PRDM15P57071 1507 aaPredicted RBP17.9■□□□□ 0.46
TOP3B-202ENST00000398793 WAPLQ7Z5K2 1190 aa17.9■□□□□ 0.46
TOP3B-202ENST00000398793 MRS2Q9HD23 443 aa17.89■□□□□ 0.45
TOP3B-202ENST00000398793 POGKQ9P215 609 aa17.89■□□□□ 0.45
TOP3B-202ENST00000398793 HECW2Q9P2P5 1572 aa17.89■□□□□ 0.45
TOP3B-202ENST00000398793 MLH3Q9UHC1 1453 aa17.88■□□□□ 0.45
TOP3B-202ENST00000398793 CCDC136Q96JN2 1154 aa17.87■□□□□ 0.45
TOP3B-202ENST00000398793 CCDC7Q96M83 1385 aa17.86■□□□□ 0.45
TOP3B-202ENST00000398793 TXNDC2Q86VQ3 553 aa17.86■□□□□ 0.45
TOP3B-202ENST00000398793 PANK3Q9H999 370 aa17.86■□□□□ 0.45
TOP3B-202ENST00000398793 CABP2Q9NPB3 220 aa17.86■□□□□ 0.45
TOP3B-202ENST00000398793 FRMPD1Q5SYB0 1578 aa17.86■□□□□ 0.45
TOP3B-202ENST00000398793 MAST1Q9Y2H9 1570 aa17.86■□□□□ 0.45
TOP3B-202ENST00000398793 SOX12O15370 315 aa17.85■□□□□ 0.45
TOP3B-202ENST00000398793 ZMYM3Q14202 1370 aa17.85■□□□□ 0.45
TOP3B-202ENST00000398793 INO80Q9ULG1 1556 aaPredicted RBP17.85■□□□□ 0.45
TOP3B-202ENST00000398793 SRPK2P78362 688 aaKnown RBP17.85■□□□□ 0.45
TOP3B-202ENST00000398793 HNRNPUQ00839 825 aaKnown RBP eCLIP17.84■□□□□ 0.45
TOP3B-202ENST00000398793 CEP152O94986 1710 aa17.84■□□□□ 0.45
TOP3B-202ENST00000398793 PLXNC1O60486 1568 aa17.84■□□□□ 0.45
TOP3B-202ENST00000398793 DIP2CQ9Y2E4 1556 aa17.83■□□□□ 0.44
TOP3B-202ENST00000398793 DISP3Q9P2K9 1392 aa17.82■□□□□ 0.44
TOP3B-202ENST00000398793 MAP3K4Q9Y6R4 1608 aa17.82■□□□□ 0.44
TOP3B-202ENST00000398793 E9PCH4 1651 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms