RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 NUP160Q12769 1436 aa21.26■□□□□ 0.99
ATP2A3-206ENST00000397043 KTN1Q86UP2 1357 aaKnown RBP21.24■□□□□ 0.99
ATP2A3-206ENST00000397043 NLRP13Q86W25 1043 aa21.24■□□□□ 0.99
ATP2A3-206ENST00000397043 EXOC6Q8TAG9 804 aa21.23■□□□□ 0.99
ATP2A3-206ENST00000397043 ABCC10Q5T3U5 1492 aa21.23■□□□□ 0.99
ATP2A3-206ENST00000397043 CDCA7LQ96GN5 454 aa21.23■□□□□ 0.99
ATP2A3-206ENST00000397043 ANP32AP39687 249 aaKnown RBP21.22■□□□□ 0.99
ATP2A3-206ENST00000397043 RCAN3Q9UKA8 241 aa21.22■□□□□ 0.99
ATP2A3-206ENST00000397043 CDC42BPAQ5VT25 1732 aa21.22■□□□□ 0.99
ATP2A3-206ENST00000397043 UHRF1BP1Q6BDS2 1440 aa21.22■□□□□ 0.99
ATP2A3-206ENST00000397043 PANK3Q9H999 370 aa21.22■□□□□ 0.99
ATP2A3-206ENST00000397043 NOP58Q9Y2X3 529 aaKnown RBP21.2■□□□□ 0.98
ATP2A3-206ENST00000397043 BRD4O60885 1362 aaPredicted RBP21.2■□□□□ 0.98
ATP2A3-206ENST00000397043 CROCC2H7BZ55 1655 aa21.2■□□□□ 0.98
ATP2A3-206ENST00000397043 PLIN1O60240 522 aa21.2■□□□□ 0.98
ATP2A3-206ENST00000397043 POLR1AO95602 1720 aaPredicted RBP21.18■□□□□ 0.98
ATP2A3-206ENST00000397043 PAK3O75914 559 aaPredicted RBP21.18■□□□□ 0.98
ATP2A3-206ENST00000397043 RRP1P56182 461 aaKnown RBP21.18■□□□□ 0.98
ATP2A3-206ENST00000397043 CCDC141Q6ZP82 1450 aa21.18■□□□□ 0.98
ATP2A3-206ENST00000397043 ADCY10Q96PN6 1610 aa21.18■□□□□ 0.98
ATP2A3-206ENST00000397043 SHANK2Q9UPX8 1470 aa21.17■□□□□ 0.98
ATP2A3-206ENST00000397043 RSPH4AQ5TD94 716 aa21.17■□□□□ 0.98
ATP2A3-206ENST00000397043 ABCA8O94911 1581 aa21.17■□□□□ 0.98
ATP2A3-206ENST00000397043 ARHGAP5Q13017 1502 aa21.17■□□□□ 0.98
ATP2A3-206ENST00000397043 FAM135AQ9P2D6 1515 aa21.16■□□□□ 0.98
ATP2A3-206ENST00000397043 TMF1P82094 1093 aa21.15■□□□□ 0.98
ATP2A3-206ENST00000397043 ARHGEF12Q9NZN5 1544 aa21.14■□□□□ 0.97
ATP2A3-206ENST00000397043 DISP3Q9P2K9 1392 aa21.12■□□□□ 0.97
ATP2A3-206ENST00000397043 RNF123Q5XPI4 1314 aa21.12■□□□□ 0.97
ATP2A3-206ENST00000397043 SYCP2Q9BX26 1530 aa21.12■□□□□ 0.97
ATP2A3-206ENST00000397043 PRAG1Q86YV5 1406 aa21.12■□□□□ 0.97
ATP2A3-206ENST00000397043 PLEKHH2Q8IVE3 1493 aa21.12■□□□□ 0.97
ATP2A3-206ENST00000397043 ZBTB47Q9UFB7 747 aaPredicted RBP21.11■□□□□ 0.97
ATP2A3-206ENST00000397043 LRPPRCP42704 1394 aaKnown RBP21.1■□□□□ 0.97
ATP2A3-206ENST00000397043 PER1O15534 1290 aaPredicted RBP21.09■□□□□ 0.97
ATP2A3-206ENST00000397043 SKAP1Q86WV1 359 aa21.08■□□□□ 0.96
ATP2A3-206ENST00000397043 KNSTRNQ9Y448 316 aa21.08■□□□□ 0.96
ATP2A3-206ENST00000397043 SAMD9LQ8IVG5 1584 aa21.08■□□□□ 0.96
ATP2A3-206ENST00000397043 TESK2Q96S53 571 aa21.07■□□□□ 0.96
ATP2A3-206ENST00000397043 WDR43Q15061 677 aaKnown RBP eCLIP21.06■□□□□ 0.96
ATP2A3-206ENST00000397043 AFAP1Q8N556 730 aa21.05■□□□□ 0.96
ATP2A3-206ENST00000397043 IPO9Q96P70 1041 aaKnown RBP21.05■□□□□ 0.96
ATP2A3-206ENST00000397043 PARD3Q8TEW0 1356 aa21.04■□□□□ 0.96
ATP2A3-206ENST00000397043 EFCAB2Q5VUJ9 269 aa21.04■□□□□ 0.96
ATP2A3-206ENST00000397043 A2MP01023 1474 aa21.04■□□□□ 0.96
ATP2A3-206ENST00000397043 ADAMTS8Q9UP79 889 aa21.04■□□□□ 0.96
ATP2A3-206ENST00000397043 PLA2R1Q13018 1463 aa21.03■□□□□ 0.96
ATP2A3-206ENST00000397043 ERBINQ96RT1 1412 aa21.02■□□□□ 0.96
ATP2A3-206ENST00000397043 DEKP35659 375 aaKnown RBP21.02■□□□□ 0.96
ATP2A3-206ENST00000397043 PDE3BQ13370 1112 aa21.02■□□□□ 0.96
ATP2A3-206ENST00000397043 KDM5DQ9BY66 1539 aa21.02■□□□□ 0.96
ATP2A3-206ENST00000397043 RTL5Q5HYW3 569 aaPredicted RBP21.01■□□□□ 0.95
ATP2A3-206ENST00000397043 CRBNQ96SW2 442 aa21.01■□□□□ 0.95
ATP2A3-206ENST00000397043 ARHGEF5Q12774 1597 aa21■□□□□ 0.95
ATP2A3-206ENST00000397043 CDC42BPBQ9Y5S2 1711 aa20.99■□□□□ 0.95
ATP2A3-206ENST00000397043 SPAG9O60271 1321 aaKnown RBP20.98■□□□□ 0.95
ATP2A3-206ENST00000397043 CCDC146Q8IYE0 955 aa20.98■□□□□ 0.95
ATP2A3-206ENST00000397043 TTC37Q6PGP7 1564 aa20.97■□□□□ 0.95
ATP2A3-206ENST00000397043 PDE4AP27815 886 aa20.97■□□□□ 0.95
ATP2A3-206ENST00000397043 LAS1LQ9Y4W2 734 aaKnown RBP20.96■□□□□ 0.95
ATP2A3-206ENST00000397043 CHGAP10645 457 aaKnown RBP20.96■□□□□ 0.95
ATP2A3-206ENST00000397043 C20orf194Q5TEA3 1177 aa20.95■□□□□ 0.94
ATP2A3-206ENST00000397043 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.94■□□□□ 0.946e-6■■■■□ 21.5
ATP2A3-206ENST00000397043 TCERG1O14776 1098 aaKnown RBP20.94■□□□□ 0.94
ATP2A3-206ENST00000397043 PREX2Q70Z35 1606 aa20.94■□□□□ 0.94
ATP2A3-206ENST00000397043 COL17A1Q9UMD9 1497 aaPredicted RBP20.94■□□□□ 0.94
ATP2A3-206ENST00000397043 KIF3BO15066 747 aa20.93■□□□□ 0.94
ATP2A3-206ENST00000397043 PPP2R1AP30153 589 aa20.93■□□□□ 0.94
ATP2A3-206ENST00000397043 TRPM1Q7Z4N2 1603 aa20.92■□□□□ 0.94
ATP2A3-206ENST00000397043 GPRASP1Q5JY77 1395 aa20.91■□□□□ 0.94
ATP2A3-206ENST00000397043 SENP3Q9H4L4 574 aaPredicted RBP20.91■□□□□ 0.94
ATP2A3-206ENST00000397043 WASHC2CQ9Y4E1 1318 aa20.91■□□□□ 0.94
ATP2A3-206ENST00000397043 ERCC6L2Q5T890 1561 aa20.91■□□□□ 0.94
ATP2A3-206ENST00000397043 TRAPPC8Q9Y2L5 1435 aa20.9■□□□□ 0.94
ATP2A3-206ENST00000397043 TNNT2P45379 298 aaPredicted RBP20.89■□□□□ 0.93
ATP2A3-206ENST00000397043 CDCA8Q53HL2 280 aa20.88■□□□□ 0.93
ATP2A3-206ENST00000397043 CFAP70Q5T0N1 1121 aa20.86■□□□□ 0.93
ATP2A3-206ENST00000397043 GOLGA2Q08379 1002 aa20.85■□□□□ 0.93
ATP2A3-206ENST00000397043 DUOX2Q9NRD8 1548 aa20.84■□□□□ 0.93
ATP2A3-206ENST00000397043 NEUROD2Q15784 382 aa20.84■□□□□ 0.93
ATP2A3-206ENST00000397043 BACH2Q9BYV9 841 aa20.84■□□□□ 0.93
ATP2A3-206ENST00000397043 APAF1O14727 1248 aa20.84■□□□□ 0.93
ATP2A3-206ENST00000397043 RGS3P49796 1198 aa20.84■□□□□ 0.93
ATP2A3-206ENST00000397043 AMER1Q5JTC6 1135 aaPredicted RBP20.83■□□□□ 0.93
ATP2A3-206ENST00000397043 E9PCH4 1651 aa20.83■□□□□ 0.92
ATP2A3-206ENST00000397043 PLCH2O75038 1416 aa20.83■□□□□ 0.92
ATP2A3-206ENST00000397043 PRDM15P57071 1507 aaPredicted RBP20.82■□□□□ 0.92
ATP2A3-206ENST00000397043 PLEKHH1Q9ULM0 1364 aa20.82■□□□□ 0.92
ATP2A3-206ENST00000397043 MAGI2Q86UL8 1455 aa20.81■□□□□ 0.92
ATP2A3-206ENST00000397043 CHD1O14646 1710 aa20.81■□□□□ 0.92
ATP2A3-206ENST00000397043 DAXXQ9UER7 740 aaPredicted RBP20.8■□□□□ 0.92
ATP2A3-206ENST00000397043 ABCC2Q92887 1545 aa20.8■□□□□ 0.92
ATP2A3-206ENST00000397043 NEFMP07197 916 aa20.8■□□□□ 0.92
ATP2A3-206ENST00000397043 SLC4A3P48751 1232 aa20.79■□□□□ 0.92
ATP2A3-206ENST00000397043 UNC13BO14795 1591 aa20.79■□□□□ 0.92
ATP2A3-206ENST00000397043 DUSP27Q5VZP5 1158 aa20.79■□□□□ 0.92
ATP2A3-206ENST00000397043 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.79■□□□□ 0.92
ATP2A3-206ENST00000397043 MYO5CQ9NQX4 1742 aa20.78■□□□□ 0.92
ATP2A3-206ENST00000397043 KANK1Q14678 1352 aa20.78■□□□□ 0.92
ATP2A3-206ENST00000397043 BLMP54132 1417 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms