RNA–Protein interactions for RNA: ENST00000397035.7

ATP2A3-204, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-204ENST00000397035 PLCB2Q00722 1185 aa19.21■□□□□ 0.67
ATP2A3-204ENST00000397035 SAFB2Q14151 953 aaKnown RBP eCLIP19.19■□□□□ 0.66
ATP2A3-204ENST00000397035 NBPF1Q3BBV0 1214 aa19.19■□□□□ 0.66
ATP2A3-204ENST00000397035 MAPK8IP3Q9UPT6 1336 aa19.18■□□□□ 0.66
ATP2A3-204ENST00000397035 APBB1O00213 710 aa19.18■□□□□ 0.66
ATP2A3-204ENST00000397035 BCAR3O75815 825 aa19.18■□□□□ 0.66
ATP2A3-204ENST00000397035 U2AF1L5P0DN76 240 aaPredicted RBP19.18■□□□□ 0.66
ATP2A3-204ENST00000397035 U2AF1Q01081 240 aaKnown RBP eCLIP19.18■□□□□ 0.66
ATP2A3-204ENST00000397035 PMFBP1Q8TBY8 1022 aa19.17■□□□□ 0.66
ATP2A3-204ENST00000397035 PTPRKQ15262 1439 aa19.16■□□□□ 0.66
ATP2A3-204ENST00000397035 AQRO60306 1485 aaKnown RBP eCLIP19.16■□□□□ 0.666e-7■■■■■ 28.7
ATP2A3-204ENST00000397035 NCOA1Q15788 1441 aa19.16■□□□□ 0.66
ATP2A3-204ENST00000397035 FYCO1Q9BQS8 1478 aa19.16■□□□□ 0.66
ATP2A3-204ENST00000397035 GBP4Q96PP9 640 aa19.14■□□□□ 0.66
ATP2A3-204ENST00000397035 SMC4Q9NTJ3 1288 aa19.14■□□□□ 0.65
ATP2A3-204ENST00000397035 PCF11O94913 1555 aaKnown RBP19.13■□□□□ 0.65
ATP2A3-204ENST00000397035 FAM43AQ8N2R8 423 aa19.12■□□□□ 0.65
ATP2A3-204ENST00000397035 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
ATP2A3-204ENST00000397035 E9PSI1 815 aa19.09■□□□□ 0.65
ATP2A3-204ENST00000397035 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
ATP2A3-204ENST00000397035 FOXD4L5Q5VV16 416 aaPredicted RBP19.09■□□□□ 0.65
ATP2A3-204ENST00000397035 FOXD4L4Q8WXT5 416 aaPredicted RBP19.09■□□□□ 0.65
ATP2A3-204ENST00000397035 CCDC144AA2RUR9 1427 aa19.07■□□□□ 0.64
ATP2A3-204ENST00000397035 STAG3Q9UJ98 1225 aa19.06■□□□□ 0.64
ATP2A3-204ENST00000397035 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.06■□□□□ 0.642e-6■■■■□ 26.4
ATP2A3-204ENST00000397035 PKNOX2Q96KN3 472 aa19.05■□□□□ 0.64
ATP2A3-204ENST00000397035 ANKRD30BQ9BXX2 1392 aa19.05■□□□□ 0.64
ATP2A3-204ENST00000397035 TRAK2O60296 914 aa19.04■□□□□ 0.64
ATP2A3-204ENST00000397035 CHMP5Q9NZZ3 219 aa19.04■□□□□ 0.64
ATP2A3-204ENST00000397035 DDX49Q9Y6V7 483 aaKnown RBP19.03■□□□□ 0.64
ATP2A3-204ENST00000397035 PPP2R1AP30153 589 aa19.03■□□□□ 0.64
ATP2A3-204ENST00000397035 C22orf23Q9BZE7 217 aa19.02■□□□□ 0.64
ATP2A3-204ENST00000397035 DDX11L8A8MPP1 907 aa19.02■□□□□ 0.64
ATP2A3-204ENST00000397035 FAM13BQ9NYF5 915 aa19.01■□□□□ 0.63
ATP2A3-204ENST00000397035 AMER1Q5JTC6 1135 aaPredicted RBP19.01■□□□□ 0.63
ATP2A3-204ENST00000397035 ELL2O00472 640 aaPredicted RBP19■□□□□ 0.63
ATP2A3-204ENST00000397035 NOL8Q76FK4 1167 aaKnown RBP19■□□□□ 0.63
ATP2A3-204ENST00000397035 FOXD4L6Q3SYB3 417 aaPredicted RBP19■□□□□ 0.63
ATP2A3-204ENST00000397035 FOXD4L3Q6VB84 417 aaPredicted RBP19■□□□□ 0.63
ATP2A3-204ENST00000397035 PDZRN3Q9UPQ7 1066 aa19■□□□□ 0.63
ATP2A3-204ENST00000397035 CALD1Q05682 793 aaKnown RBP19■□□□□ 0.63
ATP2A3-204ENST00000397035 ANKRD50Q9ULJ7 1429 aa18.99■□□□□ 0.63
ATP2A3-204ENST00000397035 CASC1Q6TDU7 716 aa18.98■□□□□ 0.63
ATP2A3-204ENST00000397035 PTPN23Q9H3S7 1636 aa18.98■□□□□ 0.63
ATP2A3-204ENST00000397035 LNPKQ9C0E8 428 aa18.98■□□□□ 0.63
ATP2A3-204ENST00000397035 MAP3K1Q13233 1512 aa18.98■□□□□ 0.63
ATP2A3-204ENST00000397035 NUTM2DQ5VT03 806 aaPredicted RBP18.98■□□□□ 0.63
ATP2A3-204ENST00000397035 STK26Q9P289 416 aa18.97■□□□□ 0.63
ATP2A3-204ENST00000397035 TRAK1Q9UPV9 953 aa18.97■□□□□ 0.63
ATP2A3-204ENST00000397035 ANKRD45Q5TZF3 282 aa18.97■□□□□ 0.63
ATP2A3-204ENST00000397035 SRPK2P78362 688 aaKnown RBP18.96■□□□□ 0.63
ATP2A3-204ENST00000397035 PDS5BQ9NTI5 1447 aa18.96■□□□□ 0.63
ATP2A3-204ENST00000397035 UBE2Q2Q8WVN8 375 aa18.96■□□□□ 0.63
ATP2A3-204ENST00000397035 ZKSCAN2Q63HK3 967 aa18.96■□□□□ 0.63
ATP2A3-204ENST00000397035 MRE11P49959 708 aa18.95■□□□□ 0.62
ATP2A3-204ENST00000397035 KIAA1107Q9UPP5 1409 aa18.94■□□□□ 0.62
ATP2A3-204ENST00000397035 IPO8O15397 1037 aaKnown RBP18.94■□□□□ 0.62
ATP2A3-204ENST00000397035 GAPVD1Q14C86 1478 aa18.94■□□□□ 0.62
ATP2A3-204ENST00000397035 RBM10P98175 930 aaKnown RBP18.94■□□□□ 0.62
ATP2A3-204ENST00000397035 NCAPD3P42695 1498 aa18.93■□□□□ 0.62
ATP2A3-204ENST00000397035 MIA2Q96PC5 1412 aa18.93■□□□□ 0.62
ATP2A3-204ENST00000397035 MCM4P33991 863 aa18.92■□□□□ 0.62
ATP2A3-204ENST00000397035 DZIP1LQ8IYY4 767 aaKnown RBP18.92■□□□□ 0.62
ATP2A3-204ENST00000397035 WASHC2CQ9Y4E1 1318 aa18.9■□□□□ 0.62
ATP2A3-204ENST00000397035 IGHDP01880 384 aa18.9■□□□□ 0.62
ATP2A3-204ENST00000397035 PANK2Q9BZ23 570 aa18.9■□□□□ 0.62
ATP2A3-204ENST00000397035 DAPK1P53355 1430 aa18.89■□□□□ 0.62
ATP2A3-204ENST00000397035 C8orf34Q49A92 452 aa18.89■□□□□ 0.62
ATP2A3-204ENST00000397035 CDK13Q14004 1512 aaKnown RBP18.89■□□□□ 0.61
ATP2A3-204ENST00000397035 PLEKHG5O94827 1062 aa18.89■□□□□ 0.61
ATP2A3-204ENST00000397035 RPRD2Q5VT52 1461 aaKnown RBP18.89■□□□□ 0.61
ATP2A3-204ENST00000397035 DUSP27Q5VZP5 1158 aa18.88■□□□□ 0.61
ATP2A3-204ENST00000397035 TCP11L2Q8N4U5 519 aa18.88■□□□□ 0.61
ATP2A3-204ENST00000397035 R3HCC1Q9Y3T6 440 aaKnown RBP18.88■□□□□ 0.61
ATP2A3-204ENST00000397035 SOX12O15370 315 aa18.88■□□□□ 0.61
ATP2A3-204ENST00000397035 JPH4Q96JJ6 628 aa18.88■□□□□ 0.61
ATP2A3-204ENST00000397035 SLFN5Q08AF3 891 aa18.87■□□□□ 0.61
ATP2A3-204ENST00000397035 EHBP1L1Q8N3D4 1523 aa18.87■□□□□ 0.61
ATP2A3-204ENST00000397035 GRPEL1Q9HAV7 217 aa18.87■□□□□ 0.61
ATP2A3-204ENST00000397035 EFCAB5A4FU69 1503 aa18.87■□□□□ 0.61
ATP2A3-204ENST00000397035 ESPNB1AK53 854 aa18.86■□□□□ 0.61
ATP2A3-204ENST00000397035 TBC1D2Q9BYX2 928 aa18.86■□□□□ 0.61
ATP2A3-204ENST00000397035 KIF3BO15066 747 aa18.85■□□□□ 0.61
ATP2A3-204ENST00000397035 DHX29Q7Z478 1369 aaKnown RBP18.85■□□□□ 0.61
ATP2A3-204ENST00000397035 NASPP49321 788 aaPredicted RBP18.85■□□□□ 0.61
ATP2A3-204ENST00000397035 MCTP1Q6DN14 999 aa18.85■□□□□ 0.61
ATP2A3-204ENST00000397035 PLPPR3Q6T4P5 718 aa18.85■□□□□ 0.61
ATP2A3-204ENST00000397035 SEC24BO95487 1268 aa18.85■□□□□ 0.61
ATP2A3-204ENST00000397035 TSR2Q969E8 191 aaKnown RBP18.85■□□□□ 0.61
ATP2A3-204ENST00000397035 GGT6Q6P531 493 aa18.84■□□□□ 0.61
ATP2A3-204ENST00000397035 PRG4Q92954 1404 aaPredicted RBP18.84■□□□□ 0.61
ATP2A3-204ENST00000397035 PDE3AQ14432 1141 aa18.84■□□□□ 0.61
ATP2A3-204ENST00000397035 RNF123Q5XPI4 1314 aa18.83■□□□□ 0.61
ATP2A3-204ENST00000397035 MPNDQ8N594 471 aa18.83■□□□□ 0.6
ATP2A3-204ENST00000397035 PTMSP20962 102 aa18.83■□□□□ 0.6
ATP2A3-204ENST00000397035 SKOR2Q2VWA4 1001 aaPredicted RBP18.83■□□□□ 0.6
ATP2A3-204ENST00000397035 RNF214Q8ND24 703 aa18.83■□□□□ 0.6
ATP2A3-204ENST00000397035 CHMP4BQ9H444 224 aaKnown RBP18.82■□□□□ 0.6
ATP2A3-204ENST00000397035 SUPT6HQ7KZ85 1726 aaKnown RBP18.82■□□□□ 0.6
ATP2A3-204ENST00000397035 KIAA2012Q0VF49 1180 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms