RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 ABCA9Q8IUA7 1624 aa22.36■■□□□ 1.17
SNX6-202ENST00000396526 ADGRL1O94910 1474 aa22.35■■□□□ 1.17
SNX6-202ENST00000396526 SPATA31E1Q6ZUB1 1445 aa22.34■■□□□ 1.17
SNX6-202ENST00000396526 CNTLNQ9NXG0 1405 aa22.34■■□□□ 1.17
SNX6-202ENST00000396526 ARID4BQ4LE39 1312 aaPredicted RBP22.33■■□□□ 1.17
SNX6-202ENST00000396526 RGL3Q3MIN7 710 aa22.33■■□□□ 1.17
SNX6-202ENST00000396526 IQGAP3Q86VI3 1631 aa22.31■■□□□ 1.16
SNX6-202ENST00000396526 RALGAPBQ86X10 1494 aa22.31■■□□□ 1.16
SNX6-202ENST00000396526 KIF7Q2M1P5 1343 aa22.3■■□□□ 1.16
SNX6-202ENST00000396526 POLR3GLQ9BT43 218 aa22.29■■□□□ 1.16
SNX6-202ENST00000396526 MAGI2Q86UL8 1455 aa22.28■■□□□ 1.16
SNX6-202ENST00000396526 C11orf95C9JLR9 678 aaPredicted RBP22.28■■□□□ 1.16
SNX6-202ENST00000396526 KIF3BO15066 747 aa22.28■■□□□ 1.16
SNX6-202ENST00000396526 ROCK2O75116 1388 aaKnown RBP22.27■■□□□ 1.16
SNX6-202ENST00000396526 CD109Q6YHK3 1445 aa22.27■■□□□ 1.16
SNX6-202ENST00000396526 ZFYVE16Q7Z3T8 1539 aa22.27■■□□□ 1.16
SNX6-202ENST00000396526 ATP10AO60312 1499 aa22.26■■□□□ 1.15
SNX6-202ENST00000396526 ATP7AQ04656 1500 aa22.26■■□□□ 1.15
SNX6-202ENST00000396526 DHX29Q7Z478 1369 aaKnown RBP22.25■■□□□ 1.15
SNX6-202ENST00000396526 STAC3Q96MF2 364 aa22.24■■□□□ 1.15
SNX6-202ENST00000396526 PLA2R1Q13018 1463 aa22.22■■□□□ 1.15
SNX6-202ENST00000396526 ZNF518AQ6AHZ1 1483 aa22.22■■□□□ 1.15
SNX6-202ENST00000396526 PRKRIP1Q9H875 184 aaPredicted RBP22.2■■□□□ 1.14
SNX6-202ENST00000396526 ST20-MTHFSA0A0A6YYL1 179 aa22.19■■□□□ 1.14
SNX6-202ENST00000396526 PRAG1Q86YV5 1406 aa22.18■■□□□ 1.14
SNX6-202ENST00000396526 CFAP74Q9C0B2 1584 aa22.18■■□□□ 1.14
SNX6-202ENST00000396526 INO80Q9ULG1 1556 aaPredicted RBP22.17■■□□□ 1.14
SNX6-202ENST00000396526 KDM5CP41229 1560 aa22.16■■□□□ 1.14
SNX6-202ENST00000396526 A2MP01023 1474 aa22.13■■□□□ 1.13
SNX6-202ENST00000396526 CYB5RLQ6IPT4 315 aa22.13■■□□□ 1.13
SNX6-202ENST00000396526 MRS2Q9HD23 443 aa22.12■■□□□ 1.13
SNX6-202ENST00000396526 POLR1AO95602 1720 aaPredicted RBP22.12■■□□□ 1.13
SNX6-202ENST00000396526 EIF2AK4Q9P2K8 1649 aaKnown RBP22.1■■□□□ 1.13
SNX6-202ENST00000396526 HNRNPUQ00839 825 aaKnown RBP eCLIP22.1■■□□□ 1.13
SNX6-202ENST00000396526 POGZQ7Z3K3 1410 aa22.1■■□□□ 1.13
SNX6-202ENST00000396526 NEO1Q92859 1461 aa22.09■■□□□ 1.13
SNX6-202ENST00000396526 GPRASP1Q5JY77 1395 aa22.09■■□□□ 1.13
SNX6-202ENST00000396526 PTPRTO14522 1441 aa22.09■■□□□ 1.13
SNX6-202ENST00000396526 NBPF1Q3BBV0 1214 aa22.08■■□□□ 1.13
SNX6-202ENST00000396526 NEFLP07196 543 aa22.08■■□□□ 1.12
SNX6-202ENST00000396526 PELP1Q8IZL8 1130 aaKnown RBP22.08■■□□□ 1.12
SNX6-202ENST00000396526 DEPDC5O75140 1603 aa22.08■■□□□ 1.12
SNX6-202ENST00000396526 TET3O43151 1660 aa22.08■■□□□ 1.12
SNX6-202ENST00000396526 MLH3Q9UHC1 1453 aa22.08■■□□□ 1.12
SNX6-202ENST00000396526 TRPM2O94759 1503 aa22.07■■□□□ 1.12
SNX6-202ENST00000396526 GGT6Q6P531 493 aa22.04■■□□□ 1.12
SNX6-202ENST00000396526 E9PCH4 1651 aa22.04■■□□□ 1.12
SNX6-202ENST00000396526 TMF1P82094 1093 aa22.04■■□□□ 1.12
SNX6-202ENST00000396526 PRDM15P57071 1507 aaPredicted RBP22.03■■□□□ 1.12
SNX6-202ENST00000396526 TRPM1Q7Z4N2 1603 aa22.03■■□□□ 1.12
SNX6-202ENST00000396526 VWDEQ8N2E2 1590 aa22.02■■□□□ 1.12
SNX6-202ENST00000396526 FAM9BQ8IZU0 186 aa22.02■■□□□ 1.12
SNX6-202ENST00000396526 KIDINS220Q9ULH0 1771 aa22.02■■□□□ 1.12
SNX6-202ENST00000396526 BCORL1Q5H9F3 1711 aa22.02■■□□□ 1.12
SNX6-202ENST00000396526 SLC24A1O60721 1099 aa22■■□□□ 1.11
SNX6-202ENST00000396526 CNGB1Q14028 1251 aaPredicted RBP22■■□□□ 1.11
SNX6-202ENST00000396526 WASHC2CQ9Y4E1 1318 aa22■■□□□ 1.11
SNX6-202ENST00000396526 KTN1Q86UP2 1357 aaKnown RBP22■■□□□ 1.11
SNX6-202ENST00000396526 SPHKAPQ2M3C7 1700 aa21.99■■□□□ 1.11
SNX6-202ENST00000396526 RAPGEF3O95398 923 aa21.99■■□□□ 1.11
SNX6-202ENST00000396526 CDCA8Q53HL2 280 aa21.99■■□□□ 1.11
SNX6-202ENST00000396526 HECW2Q9P2P5 1572 aa21.98■■□□□ 1.11
SNX6-202ENST00000396526 LAMC1P11047 1609 aa21.98■■□□□ 1.11
SNX6-202ENST00000396526 RALBP1Q15311 655 aa21.98■■□□□ 1.11
SNX6-202ENST00000396526 TMC1Q8TDI8 760 aa21.96■■□□□ 1.11
SNX6-202ENST00000396526 SUPT16HQ9Y5B9 1047 aaKnown RBP21.96■■□□□ 1.11
SNX6-202ENST00000396526 LMTK2Q8IWU2 1503 aa21.95■■□□□ 1.1
SNX6-202ENST00000396526 CHGAP10645 457 aaKnown RBP21.95■■□□□ 1.1
SNX6-202ENST00000396526 FAM69CQ0P6D2 419 aa21.94■■□□□ 1.1
SNX6-202ENST00000396526 EIF3AQ14152 1382 aaKnown RBP21.94■■□□□ 1.1
SNX6-202ENST00000396526 EFCAB6Q5THR3 1501 aa21.94■■□□□ 1.1
SNX6-202ENST00000396526 CCDC184Q52MB2 194 aa21.93■■□□□ 1.1
SNX6-202ENST00000396526 CLTCL1P53675 1640 aa21.92■■□□□ 1.1
SNX6-202ENST00000396526 TESK2Q96S53 571 aa21.91■■□□□ 1.1
SNX6-202ENST00000396526 CEP152O94986 1710 aa21.91■■□□□ 1.1
SNX6-202ENST00000396526 MROH1Q8NDA8 1641 aa21.91■■□□□ 1.1
SNX6-202ENST00000396526 NEURL4Q96JN8 1562 aa21.91■■□□□ 1.1
SNX6-202ENST00000396526 RNF17Q9BXT8 1623 aaKnown RBP21.9■■□□□ 1.1
SNX6-202ENST00000396526 GLI2P10070 1586 aa21.88■■□□□ 1.09
SNX6-202ENST00000396526 COL17A1Q9UMD9 1497 aaPredicted RBP21.88■■□□□ 1.09
SNX6-202ENST00000396526 FKBP8Q14318 412 aa21.88■■□□□ 1.09
SNX6-202ENST00000396526 MYBBP1AQ9BQG0 1328 aaKnown RBP21.88■■□□□ 1.09
SNX6-202ENST00000396526 SCAF11Q99590 1463 aaKnown RBP21.88■■□□□ 1.09
SNX6-202ENST00000396526 RPGRIP1LQ68CZ1 1315 aa21.85■■□□□ 1.09
SNX6-202ENST00000396526 ZBED9Q6R2W3 1325 aa21.85■■□□□ 1.09
SNX6-202ENST00000396526 MADDQ8WXG6 1647 aa21.85■■□□□ 1.09
SNX6-202ENST00000396526 RIMBP3CA6NJZ7 1639 aa21.84■■□□□ 1.09
SNX6-202ENST00000396526 RIMBP3BA6NNM3 1639 aa21.84■■□□□ 1.09
SNX6-202ENST00000396526 RIMBP3Q9UFD9 1639 aa21.84■■□□□ 1.09
SNX6-202ENST00000396526 NPATQ14207 1427 aa21.84■■□□□ 1.09
SNX6-202ENST00000396526 BRD4O60885 1362 aaPredicted RBP21.83■■□□□ 1.09
SNX6-202ENST00000396526 MYOM2P54296 1465 aa21.83■■□□□ 1.09
SNX6-202ENST00000396526 DISP3Q9P2K9 1392 aa21.83■■□□□ 1.09
SNX6-202ENST00000396526 KIF1BO60333 1816 aa21.83■■□□□ 1.08
SNX6-202ENST00000396526 MAP3K4Q9Y6R4 1608 aa21.82■■□□□ 1.08
SNX6-202ENST00000396526 PANK3Q9H999 370 aa21.82■■□□□ 1.08
SNX6-202ENST00000396526 PPRC1Q5VV67 1664 aaKnown RBP21.82■■□□□ 1.08
SNX6-202ENST00000396526 NLRP13Q86W25 1043 aa21.82■■□□□ 1.08
SNX6-202ENST00000396526 FRMPD1Q5SYB0 1578 aa21.82■■□□□ 1.08
SNX6-202ENST00000396526 ABCA6Q8N139 1617 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms