RNA–Protein interactions for RNA: ENST00000396444.7

USP8-202, Transcript of ubiquitin specific peptidase 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP8, Length 19,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-202ENST00000396444 BRD4O60885 1362 aaPredicted RBP6.18□□□□□ -1.42
USP8-202ENST00000396444 CADPSQ9ULU8 1353 aa6.18□□□□□ -1.42
USP8-202ENST00000396444 IPO9Q96P70 1041 aaKnown RBP6.18□□□□□ -1.42
USP8-202ENST00000396444 CCP110O43303 1012 aa6.18□□□□□ -1.42
USP8-202ENST00000396444 HMMRO75330 724 aa6.18□□□□□ -1.42
USP8-202ENST00000396444 A6NNZ2 444 aa6.18□□□□□ -1.42
USP8-202ENST00000396444 TUBB8Q3ZCM7 444 aa6.18□□□□□ -1.42
USP8-202ENST00000396444 PPP6R1Q9UPN7 881 aa6.18□□□□□ -1.42
USP8-202ENST00000396444 CENPQQ7L2Z9 268 aaPredicted RBP6.18□□□□□ -1.42
USP8-202ENST00000396444 REC8O95072 547 aa6.18□□□□□ -1.42
USP8-202ENST00000396444 KIAA2012Q0VF49 1180 aa6.18□□□□□ -1.42
USP8-202ENST00000396444 GPS2Q13227 327 aa6.17□□□□□ -1.42
USP8-202ENST00000396444 STAG3Q9UJ98 1225 aa6.17□□□□□ -1.42
USP8-202ENST00000396444 ZMYM4Q5VZL5 1548 aa6.17□□□□□ -1.42
USP8-202ENST00000396444 MYOM3Q5VTT5 1437 aa6.17□□□□□ -1.42
USP8-202ENST00000396444 EPB41L2O43491 1005 aaKnown RBP6.17□□□□□ -1.42
USP8-202ENST00000396444 AEBP1Q8IUX7 1158 aa6.17□□□□□ -1.42
USP8-202ENST00000396444 FANCD2Q9BXW9 1451 aa6.17□□□□□ -1.42
USP8-202ENST00000396444 MSNP26038 577 aaKnown RBP6.17□□□□□ -1.42
USP8-202ENST00000396444 TERF1P54274 439 aa6.17□□□□□ -1.42
USP8-202ENST00000396444 RAPGEF2Q9Y4G8 1499 aa6.16□□□□□ -1.42
USP8-202ENST00000396444 CNGB1Q14028 1251 aaPredicted RBP6.16□□□□□ -1.42
USP8-202ENST00000396444 CAGE1Q8TC20 777 aa6.16□□□□□ -1.42
USP8-202ENST00000396444 KIF2AO00139 706 aaPredicted RBP6.16□□□□□ -1.42
USP8-202ENST00000396444 PDE3AQ14432 1141 aa6.16□□□□□ -1.42
USP8-202ENST00000396444 BICRAQ9NZM4 1560 aa6.16□□□□□ -1.42
USP8-202ENST00000396444 EIF3DO15371 548 aaKnown RBP eCLIP6.16□□□□□ -1.42
USP8-202ENST00000396444 RBM19Q9Y4C8 960 aaKnown RBP6.16□□□□□ -1.42
USP8-202ENST00000396444 KIF7Q2M1P5 1343 aa6.16□□□□□ -1.42
USP8-202ENST00000396444 RRP9O43818 475 aaKnown RBP6.15□□□□□ -1.42
USP8-202ENST00000396444 NUCB2P80303 420 aa6.15□□□□□ -1.42
USP8-202ENST00000396444 CDK11BP21127 795 aaKnown RBP6.15□□□□□ -1.42
USP8-202ENST00000396444 FKBP8Q14318 412 aa6.15□□□□□ -1.42
USP8-202ENST00000396444 EFCAB5A4FU69 1503 aa6.15□□□□□ -1.42
USP8-202ENST00000396444 CWC22Q9HCG8 908 aaKnown RBP6.15□□□□□ -1.43
USP8-202ENST00000396444 E9PSI1 815 aa6.15□□□□□ -1.43
USP8-202ENST00000396444 ST18O60284 1047 aa6.15□□□□□ -1.43
USP8-202ENST00000396444 PEG3Q9GZU2 1588 aa6.15□□□□□ -1.43
USP8-202ENST00000396444 GTPBP4Q9BZE4 634 aaKnown RBP6.15□□□□□ -1.43
USP8-202ENST00000396444 DIAPH3Q9NSV4 1193 aa6.15□□□□□ -1.43
USP8-202ENST00000396444 SOGA1O94964 1423 aa6.14□□□□□ -1.43
USP8-202ENST00000396444 UBE2Q2Q8WVN8 375 aa6.14□□□□□ -1.43
USP8-202ENST00000396444 CFDP1Q9UEE9 299 aaPredicted RBP6.14□□□□□ -1.43
USP8-202ENST00000396444 SOS1Q07889 1333 aaPredicted RBP6.14□□□□□ -1.43
USP8-202ENST00000396444 TERF2IPQ9NYB0 399 aa6.14□□□□□ -1.43
USP8-202ENST00000396444 SYNJ1O43426 1573 aa6.14□□□□□ -1.43
USP8-202ENST00000396444 U2SURPO15042 1029 aaKnown RBP6.14□□□□□ -1.43
USP8-202ENST00000396444 FAM107BQ9H098 131 aa6.14□□□□□ -1.43
USP8-202ENST00000396444 SUPT16HQ9Y5B9 1047 aaKnown RBP6.14□□□□□ -1.43
USP8-202ENST00000396444 PDCP20941 246 aa6.14□□□□□ -1.43
USP8-202ENST00000396444 HSP90AB4PQ58FF6 505 aa6.14□□□□□ -1.43
USP8-202ENST00000396444 TPM4P67936 248 aa6.13□□□□□ -1.43
USP8-202ENST00000396444 TXLNBQ8N3L3 684 aa6.13□□□□□ -1.43
USP8-202ENST00000396444 HSCBQ8IWL3 235 aa6.13□□□□□ -1.43
USP8-202ENST00000396444 CENPJQ9HC77 1338 aaPredicted RBP6.13□□□□□ -1.43
USP8-202ENST00000396444 POLR3GO15318 223 aaPredicted RBP6.13□□□□□ -1.43
USP8-202ENST00000396444 HSP90B1P14625 803 aaKnown RBP6.13□□□□□ -1.43
USP8-202ENST00000396444 TEX35Q5T0J7 233 aa6.13□□□□□ -1.43
USP8-202ENST00000396444 FYCO1Q9BQS8 1478 aa6.12□□□□□ -1.43
USP8-202ENST00000396444 C11orf95C9JLR9 678 aaPredicted RBP6.12□□□□□ -1.43
USP8-202ENST00000396444 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.12□□□□□ -1.43
USP8-202ENST00000396444 FGD5Q6ZNL6 1462 aa6.12□□□□□ -1.43
USP8-202ENST00000396444 MRE11P49959 708 aa6.12□□□□□ -1.43
USP8-202ENST00000396444 MRC2Q9UBG0 1479 aa6.12□□□□□ -1.43
USP8-202ENST00000396444 FHOD3Q2V2M9 1422 aa6.12□□□□□ -1.43
USP8-202ENST00000396444 GPATCH3Q96I76 525 aa6.11□□□□□ -1.43
USP8-202ENST00000396444 ARID3AQ99856 593 aa6.11□□□□□ -1.43
USP8-202ENST00000396444 PLEKHH1Q9ULM0 1364 aa6.11□□□□□ -1.43
USP8-202ENST00000396444 FAM161AQ3B820 660 aa6.11□□□□□ -1.43
USP8-202ENST00000396444 MIER1Q8N108 512 aa6.11□□□□□ -1.43
USP8-202ENST00000396444 CASKIN1Q8WXD9 1431 aa6.1□□□□□ -1.43
USP8-202ENST00000396444 NPC1L1Q9UHC9 1359 aa6.1□□□□□ -1.43
USP8-202ENST00000396444 DAPK1P53355 1430 aa6.1□□□□□ -1.43
USP8-202ENST00000396444 CARD11Q9BXL7 1154 aa6.1□□□□□ -1.43
USP8-202ENST00000396444 HOOK1Q9UJC3 728 aaKnown RBP6.1□□□□□ -1.43
USP8-202ENST00000396444 KIF14Q15058 1648 aa6.1□□□□□ -1.43
USP8-202ENST00000396444 CCDC66A2RUB6 948 aa6.1□□□□□ -1.43
USP8-202ENST00000396444 RCAN3Q9UKA8 241 aa6.1□□□□□ -1.43
USP8-202ENST00000396444 MYBBP1AQ9BQG0 1328 aaKnown RBP6.1□□□□□ -1.43
USP8-202ENST00000396444 PES1O00541 588 aaKnown RBP6.1□□□□□ -1.43
USP8-202ENST00000396444 ADGBQ8N7X0 1667 aa6.1□□□□□ -1.43
USP8-202ENST00000396444 SH3BGRP55822 239 aaPredicted RBP6.09□□□□□ -1.43
USP8-202ENST00000396444 TPM1P09493 284 aa6.09□□□□□ -1.43
USP8-202ENST00000396444 PIP4K2AP48426 406 aaPredicted RBP6.09□□□□□ -1.43
USP8-202ENST00000396444 NT5C2P49902 561 aa6.09□□□□□ -1.43
USP8-202ENST00000396444 NAT10Q9H0A0 1025 aaKnown RBP6.09□□□□□ -1.43
USP8-202ENST00000396444 ACBD3Q9H3P7 528 aa6.09□□□□□ -1.43
USP8-202ENST00000396444 CFAP43Q8NDM7 1665 aa6.09□□□□□ -1.43
USP8-202ENST00000396444 MBD3O95983 291 aa6.09□□□□□ -1.43
USP8-202ENST00000396444 CHGAP10645 457 aaKnown RBP6.09□□□□□ -1.43
USP8-202ENST00000396444 NOM1Q5C9Z4 860 aaKnown RBP6.09□□□□□ -1.44
USP8-202ENST00000396444 IQSEC3Q9UPP2 1182 aaPredicted RBP6.08□□□□□ -1.44
USP8-202ENST00000396444 DDX10Q13206 875 aaKnown RBP6.08□□□□□ -1.44
USP8-202ENST00000396444 CCDC70Q6NSX1 233 aa6.08□□□□□ -1.44
USP8-202ENST00000396444 RNF20Q5VTR2 975 aa6.08□□□□□ -1.44
USP8-202ENST00000396444 SF3B2Q13435 895 aaKnown RBP6.08□□□□□ -1.44
USP8-202ENST00000396444 FTSJ3Q8IY81 847 aaKnown RBP6.08□□□□□ -1.44
USP8-202ENST00000396444 GOLGA6L4A6NEF3 574 aa6.08□□□□□ -1.44
USP8-202ENST00000396444 GOLGA2Q08379 1002 aa6.08□□□□□ -1.44
USP8-202ENST00000396444 CWC15Q9P013 229 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms