RNA–Protein interactions for RNA: ENST00000395503.8

ATP2A1-202, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP2A1, Length 3,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-202ENST00000395503 ATP10BO94823 1461 aa15.45■□□□□ 0.06
ATP2A1-202ENST00000395503 CEP170Q5SW79 1584 aa15.45■□□□□ 0.06
ATP2A1-202ENST00000395503 KTN1Q86UP2 1357 aaKnown RBP15.45■□□□□ 0.06
ATP2A1-202ENST00000395503 LAS1LQ9Y4W2 734 aaKnown RBP15.44■□□□□ 0.06
ATP2A1-202ENST00000395503 KDM5CP41229 1560 aa15.44■□□□□ 0.06
ATP2A1-202ENST00000395503 IPO9Q96P70 1041 aaKnown RBP15.44■□□□□ 0.06
ATP2A1-202ENST00000395503 ARID4BQ4LE39 1312 aaPredicted RBP15.44■□□□□ 0.06
ATP2A1-202ENST00000395503 MAGI1Q96QZ7 1491 aaPredicted RBP15.44■□□□□ 0.06
ATP2A1-202ENST00000395503 RNF123Q5XPI4 1314 aa15.43■□□□□ 0.06
ATP2A1-202ENST00000395503 RALGAPBQ86X10 1494 aa15.43■□□□□ 0.06
ATP2A1-202ENST00000395503 CCDC144AA2RUR9 1427 aa15.42■□□□□ 0.06
ATP2A1-202ENST00000395503 BRD4O60885 1362 aaPredicted RBP15.42■□□□□ 0.06
ATP2A1-202ENST00000395503 ADGRL2O95490 1459 aa15.41■□□□□ 0.06
ATP2A1-202ENST00000395503 SYNJ2O15056 1496 aa15.41■□□□□ 0.06
ATP2A1-202ENST00000395503 MYT1LQ9UL68 1186 aa15.41■□□□□ 0.06
ATP2A1-202ENST00000395503 RTL5Q5HYW3 569 aaPredicted RBP15.4■□□□□ 0.06
ATP2A1-202ENST00000395503 PTPRGP23470 1445 aa15.4■□□□□ 0.06
ATP2A1-202ENST00000395503 DISP3Q9P2K9 1392 aa15.39■□□□□ 0.05
ATP2A1-202ENST00000395503 CRBNQ96SW2 442 aa15.39■□□□□ 0.05
ATP2A1-202ENST00000395503 UHRF1BP1Q6BDS2 1440 aa15.39■□□□□ 0.05
ATP2A1-202ENST00000395503 ITSN2Q9NZM3 1697 aa15.39■□□□□ 0.05
ATP2A1-202ENST00000395503 PER1O15534 1290 aaPredicted RBP15.38■□□□□ 0.05
ATP2A1-202ENST00000395503 LRPPRCP42704 1394 aaKnown RBP15.38■□□□□ 0.05
ATP2A1-202ENST00000395503 PDE4AP27815 886 aa15.38■□□□□ 0.05
ATP2A1-202ENST00000395503 C20orf194Q5TEA3 1177 aa15.38■□□□□ 0.05
ATP2A1-202ENST00000395503 ADAMTS8Q9UP79 889 aa15.37■□□□□ 0.05
ATP2A1-202ENST00000395503 ADGBQ8N7X0 1667 aa15.36■□□□□ 0.05
ATP2A1-202ENST00000395503 TMF1P82094 1093 aa15.35■□□□□ 0.05
ATP2A1-202ENST00000395503 ABCC10Q5T3U5 1492 aa15.35■□□□□ 0.05
ATP2A1-202ENST00000395503 TESK2Q96S53 571 aa15.35■□□□□ 0.05
ATP2A1-202ENST00000395503 CCDC146Q8IYE0 955 aa15.34■□□□□ 0.05
ATP2A1-202ENST00000395503 POLR1AO95602 1720 aaPredicted RBP15.33■□□□□ 0.04
ATP2A1-202ENST00000395503 SLC4A3P48751 1232 aa15.33■□□□□ 0.04
ATP2A1-202ENST00000395503 PRAG1Q86YV5 1406 aa15.33■□□□□ 0.04
ATP2A1-202ENST00000395503 KNSTRNQ9Y448 316 aa15.33■□□□□ 0.04
ATP2A1-202ENST00000395503 WDR43Q15061 677 aaKnown RBP eCLIP15.32■□□□□ 0.04
ATP2A1-202ENST00000395503 FAM135AQ9P2D6 1515 aa15.32■□□□□ 0.04
ATP2A1-202ENST00000395503 CDC42BPAQ5VT25 1732 aa15.32■□□□□ 0.04
ATP2A1-202ENST00000395503 PLEKHH2Q8IVE3 1493 aa15.32■□□□□ 0.04
ATP2A1-202ENST00000395503 PARD3Q8TEW0 1356 aa15.31■□□□□ 0.04
ATP2A1-202ENST00000395503 TCERG1O14776 1098 aaKnown RBP15.31■□□□□ 0.04
ATP2A1-202ENST00000395503 SENP3Q9H4L4 574 aaPredicted RBP15.31■□□□□ 0.04
ATP2A1-202ENST00000395503 CCDC141Q6ZP82 1450 aa15.3■□□□□ 0.04
ATP2A1-202ENST00000395503 NUP160Q12769 1436 aa15.3■□□□□ 0.04
ATP2A1-202ENST00000395503 CROCC2H7BZ55 1655 aa15.29■□□□□ 0.04
ATP2A1-202ENST00000395503 NEFMP07197 916 aa15.29■□□□□ 0.04
ATP2A1-202ENST00000395503 PDE3BQ13370 1112 aa15.29■□□□□ 0.04
ATP2A1-202ENST00000395503 ARHGAP5Q13017 1502 aa15.28■□□□□ 0.04
ATP2A1-202ENST00000395503 ARHGEF12Q9NZN5 1544 aa15.28■□□□□ 0.04
ATP2A1-202ENST00000395503 PLA2R1Q13018 1463 aa15.28■□□□□ 0.04
ATP2A1-202ENST00000395503 ERBINQ96RT1 1412 aa15.28■□□□□ 0.04
ATP2A1-202ENST00000395503 A2MP01023 1474 aa15.28■□□□□ 0.04
ATP2A1-202ENST00000395503 RGS3P49796 1198 aa15.27■□□□□ 0.04
ATP2A1-202ENST00000395503 AFAP1Q8N556 730 aa15.27■□□□□ 0.04
ATP2A1-202ENST00000395503 BACH2Q9BYV9 841 aa15.27■□□□□ 0.04
ATP2A1-202ENST00000395503 SYCP2Q9BX26 1530 aa15.27■□□□□ 0.04
ATP2A1-202ENST00000395503 ABCA8O94911 1581 aa15.26■□□□□ 0.03
ATP2A1-202ENST00000395503 SHANK2Q9UPX8 1470 aa15.26■□□□□ 0.03
ATP2A1-202ENST00000395503 TNNT2P45379 298 aaPredicted RBP15.26■□□□□ 0.03
ATP2A1-202ENST00000395503 RSPH4AQ5TD94 716 aa15.26■□□□□ 0.03
ATP2A1-202ENST00000395503 RTN4Q9NQC3 1192 aaKnown RBP15.26■□□□□ 0.03
ATP2A1-202ENST00000395503 PPP2R1AP30153 589 aa15.25■□□□□ 0.03
ATP2A1-202ENST00000395503 ADCY10Q96PN6 1610 aa15.25■□□□□ 0.03
ATP2A1-202ENST00000395503 KDM5DQ9BY66 1539 aa15.24■□□□□ 0.03
ATP2A1-202ENST00000395503 NEUROD2Q15784 382 aa15.23■□□□□ 0.03
ATP2A1-202ENST00000395503 SAMD9LQ8IVG5 1584 aa15.23■□□□□ 0.03
ATP2A1-202ENST00000395503 CHGAP10645 457 aaKnown RBP15.23■□□□□ 0.03
ATP2A1-202ENST00000395503 APAF1O14727 1248 aa15.21■□□□□ 0.03
ATP2A1-202ENST00000395503 PLEKHH1Q9ULM0 1364 aa15.21■□□□□ 0.03
ATP2A1-202ENST00000395503 GOLGA2Q08379 1002 aa15.2■□□□□ 0.02
ATP2A1-202ENST00000395503 EFCAB2Q5VUJ9 269 aa15.2■□□□□ 0.02
ATP2A1-202ENST00000395503 DAXXQ9UER7 740 aaPredicted RBP15.2■□□□□ 0.02
ATP2A1-202ENST00000395503 COL17A1Q9UMD9 1497 aaPredicted RBP15.2■□□□□ 0.02
ATP2A1-202ENST00000395503 SPINK5Q9NQ38 1064 aaPredicted RBP15.2■□□□□ 0.02
ATP2A1-202ENST00000395503 BCAR3O75815 825 aa15.18■□□□□ 0.02
ATP2A1-202ENST00000395503 CFAP70Q5T0N1 1121 aa15.18■□□□□ 0.02
ATP2A1-202ENST00000395503 DUSP27Q5VZP5 1158 aa15.18■□□□□ 0.02
ATP2A1-202ENST00000395503 SPAG9O60271 1321 aaKnown RBP15.18■□□□□ 0.02
ATP2A1-202ENST00000395503 KIF3BO15066 747 aa15.17■□□□□ 0.02
ATP2A1-202ENST00000395503 PRKCSHP14314 528 aaPredicted RBP15.17■□□□□ 0.02
ATP2A1-202ENST00000395503 AMER1Q5JTC6 1135 aaPredicted RBP15.17■□□□□ 0.02
ATP2A1-202ENST00000395503 MS4A1P11836 297 aa15.16■□□□□ 0.02
ATP2A1-202ENST00000395503 RRP7AQ9Y3A4 280 aaKnown RBP15.16■□□□□ 0.02
ATP2A1-202ENST00000395503 MAGI2Q86UL8 1455 aa15.16■□□□□ 0.02
ATP2A1-202ENST00000395503 TRPM1Q7Z4N2 1603 aa15.16■□□□□ 0.02
ATP2A1-202ENST00000395503 GPRASP1Q5JY77 1395 aa15.16■□□□□ 0.02
ATP2A1-202ENST00000395503 IL27Q8NEV9 243 aa15.16■□□□□ 0.02
ATP2A1-202ENST00000395503 CDC42BPBQ9Y5S2 1711 aa15.15■□□□□ 0.02
ATP2A1-202ENST00000395503 TTC37Q6PGP7 1564 aa15.15■□□□□ 0.02
ATP2A1-202ENST00000395503 WASHC2CQ9Y4E1 1318 aa15.15■□□□□ 0.02
ATP2A1-202ENST00000395503 CANXP27824 592 aaKnown RBP15.15■□□□□ 0.02
ATP2A1-202ENST00000395503 DMRT2Q9Y5R5 561 aa15.15■□□□□ 0.02
ATP2A1-202ENST00000395503 ARHGEF5Q12774 1597 aa15.14■□□□□ 0.01
ATP2A1-202ENST00000395503 TRAPPC8Q9Y2L5 1435 aa15.14■□□□□ 0.01
ATP2A1-202ENST00000395503 FRAT1Q92837 279 aaPredicted RBP15.14■□□□□ 0.01
ATP2A1-202ENST00000395503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.12■□□□□ 0.01
ATP2A1-202ENST00000395503 BLMP54132 1417 aaPredicted RBP15.12■□□□□ 0.01
ATP2A1-202ENST00000395503 NUTM2DQ5VT03 806 aaPredicted RBP15.12■□□□□ 0.01
ATP2A1-202ENST00000395503 ERCC6L2Q5T890 1561 aa15.12■□□□□ 0.01
ATP2A1-202ENST00000395503 E9PCH4 1651 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms