RNA–Protein interactions for RNA: ENST00000395285.3

ARFGAP1-204, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-204ENST00000395285 ZCCHC11Q5TAX3 1644 aaKnown RBP22.61■■□□□ 1.21
ARFGAP1-204ENST00000395285 ARHGAP5Q13017 1502 aa22.6■■□□□ 1.21
ARFGAP1-204ENST00000395285 TEX14Q8IWB6 1497 aa22.6■■□□□ 1.21
ARFGAP1-204ENST00000395285 KIF15Q9NS87 1388 aa22.58■■□□□ 1.21
ARFGAP1-204ENST00000395285 KIAA1107Q9UPP5 1409 aa22.57■■□□□ 1.2
ARFGAP1-204ENST00000395285 PLEKHH2Q8IVE3 1493 aa22.56■■□□□ 1.2
ARFGAP1-204ENST00000395285 MYO5CQ9NQX4 1742 aa22.56■■□□□ 1.2
ARFGAP1-204ENST00000395285 SENP3-EIF4A1A0A087X0R7 540 aa22.55■■□□□ 1.2
ARFGAP1-204ENST00000395285 SYCP2Q9BX26 1530 aa22.54■■□□□ 1.2
ARFGAP1-204ENST00000395285 PLEKHG5O94827 1062 aa22.54■■□□□ 1.2
ARFGAP1-204ENST00000395285 NOP58Q9Y2X3 529 aaKnown RBP22.54■■□□□ 1.2
ARFGAP1-204ENST00000395285 NUP155O75694 1391 aa22.53■■□□□ 1.2
ARFGAP1-204ENST00000395285 PLCH2O75038 1416 aa22.53■■□□□ 1.2
ARFGAP1-204ENST00000395285 PKD2Q13563 968 aa22.53■■□□□ 1.2
ARFGAP1-204ENST00000395285 SPATA31E1Q6ZUB1 1445 aa22.53■■□□□ 1.2
ARFGAP1-204ENST00000395285 KDM5DQ9BY66 1539 aa22.52■■□□□ 1.19
ARFGAP1-204ENST00000395285 MAST1Q9Y2H9 1570 aa22.51■■□□□ 1.19
ARFGAP1-204ENST00000395285 RTL5Q5HYW3 569 aaPredicted RBP22.5■■□□□ 1.19
ARFGAP1-204ENST00000395285 EFCAB2Q5VUJ9 269 aa22.48■■□□□ 1.19
ARFGAP1-204ENST00000395285 PAK3O75914 559 aaPredicted RBP22.47■■□□□ 1.19
ARFGAP1-204ENST00000395285 ZBED9Q6R2W3 1325 aa22.44■■□□□ 1.18
ARFGAP1-204ENST00000395285 B4GALNT3Q6L9W6 998 aa22.44■■□□□ 1.18
ARFGAP1-204ENST00000395285 USP47Q96K76 1375 aa22.44■■□□□ 1.18
ARFGAP1-204ENST00000395285 ARHGEF12Q9NZN5 1544 aa22.43■■□□□ 1.18
ARFGAP1-204ENST00000395285 PLXNC1O60486 1568 aa22.42■■□□□ 1.18
ARFGAP1-204ENST00000395285 ARAP3Q8WWN8 1544 aa22.42■■□□□ 1.18
ARFGAP1-204ENST00000395285 WDR7Q9Y4E6 1490 aa22.42■■□□□ 1.18
ARFGAP1-204ENST00000395285 PPP4R2Q9NY27 417 aa22.42■■□□□ 1.18
ARFGAP1-204ENST00000395285 KDM2AQ9Y2K7 1162 aa22.42■■□□□ 1.18
ARFGAP1-204ENST00000395285 PODXL2Q9NZ53 605 aa22.39■■□□□ 1.18
ARFGAP1-204ENST00000395285 ABCC1P33527 1531 aa22.39■■□□□ 1.17
ARFGAP1-204ENST00000395285 RIMBP3CA6NJZ7 1639 aa22.38■■□□□ 1.17
ARFGAP1-204ENST00000395285 RIMBP3BA6NNM3 1639 aa22.38■■□□□ 1.17
ARFGAP1-204ENST00000395285 RIMBP3Q9UFD9 1639 aa22.38■■□□□ 1.17
ARFGAP1-204ENST00000395285 BCORL1Q5H9F3 1711 aa22.37■■□□□ 1.17
ARFGAP1-204ENST00000395285 FAM135AQ9P2D6 1515 aa22.37■■□□□ 1.17
ARFGAP1-204ENST00000395285 DHX29Q7Z478 1369 aaKnown RBP22.37■■□□□ 1.17
ARFGAP1-204ENST00000395285 DUOX2Q9NRD8 1548 aa22.36■■□□□ 1.17
ARFGAP1-204ENST00000395285 CARD11Q9BXL7 1154 aa22.34■■□□□ 1.17
ARFGAP1-204ENST00000395285 DAXXQ9UER7 740 aaPredicted RBP22.34■■□□□ 1.17
ARFGAP1-204ENST00000395285 UNC13BO14795 1591 aa22.34■■□□□ 1.17
ARFGAP1-204ENST00000395285 POLR1AO95602 1720 aaPredicted RBP22.34■■□□□ 1.17
ARFGAP1-204ENST00000395285 ERBINQ96RT1 1412 aa22.33■■□□□ 1.17
ARFGAP1-204ENST00000395285 TRAPPC8Q9Y2L5 1435 aa22.33■■□□□ 1.17
ARFGAP1-204ENST00000395285 ABCA9Q8IUA7 1624 aa22.3■■□□□ 1.16
ARFGAP1-204ENST00000395285 DCAF11Q8TEB1 546 aa22.3■■□□□ 1.16
ARFGAP1-204ENST00000395285 ASXL2Q76L83 1435 aa22.3■■□□□ 1.16
ARFGAP1-204ENST00000395285 RTEL1-TNFRSF6BF6WH68 1400 aa22.29■■□□□ 1.16
ARFGAP1-204ENST00000395285 ST20-MTHFSA0A0A6YYL1 179 aa22.28■■□□□ 1.16
ARFGAP1-204ENST00000395285 SPAG9O60271 1321 aaKnown RBP22.28■■□□□ 1.16
ARFGAP1-204ENST00000395285 FANCAO15360 1455 aa22.27■■□□□ 1.16
ARFGAP1-204ENST00000395285 UHRF1BP1Q6BDS2 1440 aa22.27■■□□□ 1.16
ARFGAP1-204ENST00000395285 KDM5CP41229 1560 aa22.27■■□□□ 1.16
ARFGAP1-204ENST00000395285 TMC1Q8TDI8 760 aa22.26■■□□□ 1.15
ARFGAP1-204ENST00000395285 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.26■■□□□ 1.151e-10■□□□□ 8.9
ARFGAP1-204ENST00000395285 MAGI2Q86UL8 1455 aa22.26■■□□□ 1.15
ARFGAP1-204ENST00000395285 IQGAP3Q86VI3 1631 aa22.26■■□□□ 1.15
ARFGAP1-204ENST00000395285 NPM1P06748 294 aaKnown RBP eCLIP22.26■■□□□ 1.15
ARFGAP1-204ENST00000395285 AFAP1Q8N556 730 aa22.25■■□□□ 1.15
ARFGAP1-204ENST00000395285 CCDC144AA2RUR9 1427 aa22.22■■□□□ 1.15
ARFGAP1-204ENST00000395285 ZFYVE16Q7Z3T8 1539 aa22.22■■□□□ 1.15
ARFGAP1-204ENST00000395285 PNISRQ8TF01 805 aaKnown RBP22.22■■□□□ 1.15
ARFGAP1-204ENST00000395285 NUDCQ9Y266 331 aa22.21■■□□□ 1.15
ARFGAP1-204ENST00000395285 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
ARFGAP1-204ENST00000395285 SMG6Q86US8 1419 aaKnown RBP22.2■■□□□ 1.14
ARFGAP1-204ENST00000395285 PLA2R1Q13018 1463 aa22.19■■□□□ 1.14
ARFGAP1-204ENST00000395285 RALGAPBQ86X10 1494 aa22.19■■□□□ 1.14
ARFGAP1-204ENST00000395285 ADGRL1O94910 1474 aa22.19■■□□□ 1.14
ARFGAP1-204ENST00000395285 SCAPERQ9BY12 1400 aa22.17■■□□□ 1.14
ARFGAP1-204ENST00000395285 ARID4BQ4LE39 1312 aaPredicted RBP22.17■■□□□ 1.14
ARFGAP1-204ENST00000395285 ATP10AO60312 1499 aa22.17■■□□□ 1.14
ARFGAP1-204ENST00000395285 ROCK2O75116 1388 aaKnown RBP22.16■■□□□ 1.14
ARFGAP1-204ENST00000395285 ZBTB47Q9UFB7 747 aaPredicted RBP22.15■■□□□ 1.14
ARFGAP1-204ENST00000395285 ATP7AQ04656 1500 aa22.15■■□□□ 1.14
ARFGAP1-204ENST00000395285 GLIPR1L2Q4G1C9 344 aa22.14■■□□□ 1.14
ARFGAP1-204ENST00000395285 ZMYND15Q9H091 742 aa22.14■■□□□ 1.14
ARFGAP1-204ENST00000395285 INO80Q9ULG1 1556 aaPredicted RBP22.14■■□□□ 1.14
ARFGAP1-204ENST00000395285 IPO9Q96P70 1041 aaKnown RBP22.13■■□□□ 1.13
ARFGAP1-204ENST00000395285 BRPF3Q9ULD4 1205 aa22.13■■□□□ 1.13
ARFGAP1-204ENST00000395285 NBPF1Q3BBV0 1214 aa22.12■■□□□ 1.13
ARFGAP1-204ENST00000395285 ANP32AP39687 249 aaKnown RBP22.1■■□□□ 1.13
ARFGAP1-204ENST00000395285 VSIG10Q8N0Z9 540 aa22.09■■□□□ 1.13
ARFGAP1-204ENST00000395285 DEPDC5O75140 1603 aa22.08■■□□□ 1.13
ARFGAP1-204ENST00000395285 MYBBP1AQ9BQG0 1328 aaKnown RBP22.08■■□□□ 1.13
ARFGAP1-204ENST00000395285 CD109Q6YHK3 1445 aa22.08■■□□□ 1.12
ARFGAP1-204ENST00000395285 CYB5RLQ6IPT4 315 aa22.08■■□□□ 1.12
ARFGAP1-204ENST00000395285 RSPH6AQ9H0K4 717 aa22.08■■□□□ 1.12
ARFGAP1-204ENST00000395285 PRAG1Q86YV5 1406 aa22.07■■□□□ 1.12
ARFGAP1-204ENST00000395285 ZNF518AQ6AHZ1 1483 aa22.06■■□□□ 1.12
ARFGAP1-204ENST00000395285 WASHC2CQ9Y4E1 1318 aa22.06■■□□□ 1.12
ARFGAP1-204ENST00000395285 RNF123Q5XPI4 1314 aa22.05■■□□□ 1.12
ARFGAP1-204ENST00000395285 A2MP01023 1474 aa22.05■■□□□ 1.12
ARFGAP1-204ENST00000395285 KANK1Q14678 1352 aa22.05■■□□□ 1.12
ARFGAP1-204ENST00000395285 RALBP1Q15311 655 aa22.04■■□□□ 1.12
ARFGAP1-204ENST00000395285 CFAP74Q9C0B2 1584 aa22.04■■□□□ 1.12
ARFGAP1-204ENST00000395285 EIF2AK4Q9P2K8 1649 aaKnown RBP22.03■■□□□ 1.12
ARFGAP1-204ENST00000395285 KIF3BO15066 747 aa22.02■■□□□ 1.12
ARFGAP1-204ENST00000395285 NEFMP07197 916 aa22.02■■□□□ 1.12
ARFGAP1-204ENST00000395285 BRD4O60885 1362 aaPredicted RBP22.02■■□□□ 1.12
ARFGAP1-204ENST00000395285 CC2D1BQ5T0F9 858 aaKnown RBP22.02■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms