RNA–Protein interactions for RNA: ENST00000395185.7

HERC4-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-203ENST00000395185 ITSN2Q9NZM3 1697 aa12.73□□□□□ -0.37
HERC4-203ENST00000395185 RRP7BPQ9NSQ0 103 aa12.73□□□□□ -0.37
HERC4-203ENST00000395185 AGLP35573 1532 aa12.72□□□□□ -0.37
HERC4-203ENST00000395185 CNTLNQ9NXG0 1405 aa12.72□□□□□ -0.37
HERC4-203ENST00000395185 WASHC2CQ9Y4E1 1318 aa12.72□□□□□ -0.37
HERC4-203ENST00000395185 CHIC2Q9UKJ5 165 aa12.72□□□□□ -0.37
HERC4-203ENST00000395185 ATP7AQ04656 1500 aa12.72□□□□□ -0.37
HERC4-203ENST00000395185 DAPK1P53355 1430 aa12.71□□□□□ -0.37
HERC4-203ENST00000395185 ROCK1Q13464 1354 aa12.71□□□□□ -0.37
HERC4-203ENST00000395185 ZMYM3Q14202 1370 aa12.7□□□□□ -0.38
HERC4-203ENST00000395185 REREQ9P2R6 1566 aa12.7□□□□□ -0.38
HERC4-203ENST00000395185 DIP2CQ9Y2E4 1556 aa12.7□□□□□ -0.38
HERC4-203ENST00000395185 BCORL1Q5H9F3 1711 aa12.7□□□□□ -0.38
HERC4-203ENST00000395185 ADAMTSL3P82987 1691 aa12.7□□□□□ -0.38
HERC4-203ENST00000395185 ARHGEF5Q12774 1597 aa12.69□□□□□ -0.38
HERC4-203ENST00000395185 ANKRD30AQ9BXX3 1397 aa12.69□□□□□ -0.38
HERC4-203ENST00000395185 ITGAEP38570 1179 aa12.68□□□□□ -0.38
HERC4-203ENST00000395185 NCOA1Q15788 1441 aa12.68□□□□□ -0.38
HERC4-203ENST00000395185 DNMT1P26358 1616 aaKnown RBP12.67□□□□□ -0.38
HERC4-203ENST00000395185 HFM1A2PYH4 1435 aa12.67□□□□□ -0.38
HERC4-203ENST00000395185 KIDINS220Q9ULH0 1771 aa12.66□□□□□ -0.38
HERC4-203ENST00000395185 ADGRL2O95490 1459 aa12.66□□□□□ -0.38
HERC4-203ENST00000395185 SHANK2Q9UPX8 1470 aa12.66□□□□□ -0.38
HERC4-203ENST00000395185 NAIPQ13075 1403 aa12.66□□□□□ -0.38
HERC4-203ENST00000395185 MYCNP04198 464 aaPredicted RBP12.66□□□□□ -0.38
HERC4-203ENST00000395185 ABCA6Q8N139 1617 aa12.66□□□□□ -0.38
HERC4-203ENST00000395185 MADDQ8WXG6 1647 aa12.66□□□□□ -0.38
HERC4-203ENST00000395185 SETD5Q9C0A6 1442 aa12.65□□□□□ -0.38
HERC4-203ENST00000395185 HSPA2P54652 639 aa12.65□□□□□ -0.38
HERC4-203ENST00000395185 KIF15Q9NS87 1388 aa12.65□□□□□ -0.38
HERC4-203ENST00000395185 INO80Q9ULG1 1556 aaPredicted RBP12.63□□□□□ -0.39
HERC4-203ENST00000395185 KANK1Q14678 1352 aa12.62□□□□□ -0.39
HERC4-203ENST00000395185 UHRF1BP1Q6BDS2 1440 aa12.62□□□□□ -0.39
HERC4-203ENST00000395185 MAST1Q9Y2H9 1570 aa12.61□□□□□ -0.39
HERC4-203ENST00000395185 SAMD1Q6SPF0 538 aaPredicted RBP12.61□□□□□ -0.39
HERC4-203ENST00000395185 RAB3GAP2Q9H2M9 1393 aa12.6□□□□□ -0.39
HERC4-203ENST00000395185 ZBTB22O15209 634 aa12.6□□□□□ -0.39
HERC4-203ENST00000395185 NPATQ14207 1427 aa12.6□□□□□ -0.39
HERC4-203ENST00000395185 RIMS1Q86UR5 1692 aaKnown RBP12.6□□□□□ -0.39
HERC4-203ENST00000395185 ACIN1Q9UKV3 1341 aaKnown RBP12.6□□□□□ -0.39
HERC4-203ENST00000395185 FBXO31Q5XUX0 539 aaPredicted RBP12.59□□□□□ -0.39
HERC4-203ENST00000395185 DUOX2Q9NRD8 1548 aa12.58□□□□□ -0.4
HERC4-203ENST00000395185 ADGBQ8N7X0 1667 aa12.57□□□□□ -0.4
HERC4-203ENST00000395185 PLXNC1O60486 1568 aa12.57□□□□□ -0.4
HERC4-203ENST00000395185 THEMISQ8N1K5 641 aaPredicted RBP12.57□□□□□ -0.4
HERC4-203ENST00000395185 SIGLEC1Q9BZZ2 1709 aa12.57□□□□□ -0.4
HERC4-203ENST00000395185 ERBINQ96RT1 1412 aa12.56□□□□□ -0.4
HERC4-203ENST00000395185 CROCC2H7BZ55 1655 aa12.55□□□□□ -0.4
HERC4-203ENST00000395185 LMTK3Q96Q04 1460 aa12.55□□□□□ -0.4
HERC4-203ENST00000395185 FER1L4A9Z1Z3 1794 aa12.55□□□□□ -0.4
HERC4-203ENST00000395185 TNRQ92752 1358 aa12.55□□□□□ -0.4
HERC4-203ENST00000395185 ANKRD50Q9ULJ7 1429 aa12.54□□□□□ -0.4
HERC4-203ENST00000395185 PKD2Q13563 968 aa12.54□□□□□ -0.4
HERC4-203ENST00000395185 STAG3Q9UJ98 1225 aa12.54□□□□□ -0.4
HERC4-203ENST00000395185 DHX57Q6P158 1386 aaKnown RBP12.53□□□□□ -0.4
HERC4-203ENST00000395185 FAM135AQ9P2D6 1515 aa12.52□□□□□ -0.4
HERC4-203ENST00000395185 SOCS7O14512 581 aa12.52□□□□□ -0.41
HERC4-203ENST00000395185 CAPN15O75808 1086 aa12.51□□□□□ -0.41
HERC4-203ENST00000395185 ANKLE2Q86XL3 938 aa12.51□□□□□ -0.41
HERC4-203ENST00000395185 KDM5DQ9BY66 1539 aa12.51□□□□□ -0.41
HERC4-203ENST00000395185 FBXO41Q8TF61 875 aa12.5□□□□□ -0.41
HERC4-203ENST00000395185 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
HERC4-203ENST00000395185 CLSPNQ9HAW4 1339 aa12.5□□□□□ -0.41
HERC4-203ENST00000395185 PZPP20742 1482 aa12.5□□□□□ -0.41
HERC4-203ENST00000395185 GCC2Q8IWJ2 1684 aa12.5□□□□□ -0.41
HERC4-203ENST00000395185 SETD1BQ9UPS6 1966 aaKnown RBP12.5□□□□□ -0.41
HERC4-203ENST00000395185 NCKAP5LQ9HCH0 1330 aa12.49□□□□□ -0.41
HERC4-203ENST00000395185 SLC52A1Q9NWF4 448 aa12.49□□□□□ -0.41
HERC4-203ENST00000395185 NUP155O75694 1391 aa12.48□□□□□ -0.41
HERC4-203ENST00000395185 TRIM52Q96A61 297 aa12.48□□□□□ -0.41
HERC4-203ENST00000395185 ARHGAP31Q2M1Z3 1444 aa12.47□□□□□ -0.41
HERC4-203ENST00000395185 HDGFP51858 240 aaKnown RBP12.47□□□□□ -0.41
HERC4-203ENST00000395185 MPHOSPH9Q99550 1183 aa12.47□□□□□ -0.41
HERC4-203ENST00000395185 EID1Q9Y6B2 187 aa12.47□□□□□ -0.41
HERC4-203ENST00000395185 ABCC3O15438 1527 aa12.46□□□□□ -0.42
HERC4-203ENST00000395185 NLRP1Q9C000 1473 aa12.46□□□□□ -0.42
HERC4-203ENST00000395185 MROH2AA6NES4 1674 aa12.45□□□□□ -0.42
HERC4-203ENST00000395185 C3P01024 1663 aa12.45□□□□□ -0.42
HERC4-203ENST00000395185 CLTCQ00610 1675 aaKnown RBP12.45□□□□□ -0.42
HERC4-203ENST00000395185 EIF2AK4Q9P2K8 1649 aaKnown RBP12.45□□□□□ -0.42
HERC4-203ENST00000395185 IDI1Q13907 227 aa12.45□□□□□ -0.42
HERC4-203ENST00000395185 A2ML1A8K2U0 1454 aa12.45□□□□□ -0.42
HERC4-203ENST00000395185 TXNDC2Q86VQ3 553 aa12.44□□□□□ -0.42
HERC4-203ENST00000395185 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
HERC4-203ENST00000395185 PTPRTO14522 1441 aa12.44□□□□□ -0.42
HERC4-203ENST00000395185 CERKQ8TCT0 537 aa12.43□□□□□ -0.42
HERC4-203ENST00000395185 PREX1Q8TCU6 1659 aa12.42□□□□□ -0.42
HERC4-203ENST00000395185 RNF17Q9BXT8 1623 aaKnown RBP12.42□□□□□ -0.42
HERC4-203ENST00000395185 ERVK-7P63135 1459 aa12.41□□□□□ -0.42
HERC4-203ENST00000395185 CHGAP10645 457 aaKnown RBP12.41□□□□□ -0.42
HERC4-203ENST00000395185 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
HERC4-203ENST00000395185 BCANQ96GW7 911 aa12.4□□□□□ -0.42
HERC4-203ENST00000395185 PLA2R1Q13018 1463 aa12.4□□□□□ -0.43
HERC4-203ENST00000395185 VWDEQ8N2E2 1590 aa12.39□□□□□ -0.43
HERC4-203ENST00000395185 PRDM15P57071 1507 aaPredicted RBP12.39□□□□□ -0.43
HERC4-203ENST00000395185 LMTK2Q8IWU2 1503 aa12.39□□□□□ -0.43
HERC4-203ENST00000395185 CAMSAP1Q5T5Y3 1602 aa12.39□□□□□ -0.43
HERC4-203ENST00000395185 ANKRD30BQ9BXX2 1392 aa12.39□□□□□ -0.43
HERC4-203ENST00000395185 UNC13BO14795 1591 aa12.39□□□□□ -0.43
HERC4-203ENST00000395185 CEP170BQ9Y4F5 1589 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms