RNA–Protein interactions for RNA: ENST00000394957.7

VSIR-201, Transcript of V-set immunoregulatory receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSIR, Length 4,689 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIR-201ENST00000394957 BECN1Q14457 450 aa18.72■□□□□ 0.59
VSIR-201ENST00000394957 IL27Q8NEV9 243 aa18.72■□□□□ 0.59
VSIR-201ENST00000394957 MAPK8IP3Q9UPT6 1336 aa18.72■□□□□ 0.59
VSIR-201ENST00000394957 HSPA5P11021 654 aaKnown RBP18.71■□□□□ 0.59
VSIR-201ENST00000394957 DDRGK1Q96HY6 314 aa18.71■□□□□ 0.59
VSIR-201ENST00000394957 PNNQ9H307 717 aaKnown RBP18.7■□□□□ 0.58
VSIR-201ENST00000394957 KIF21AQ7Z4S6 1674 aa18.7■□□□□ 0.58
VSIR-201ENST00000394957 PLB1Q6P1J6 1458 aa18.7■□□□□ 0.58
VSIR-201ENST00000394957 SCAPERQ9BY12 1400 aa18.7■□□□□ 0.58
VSIR-201ENST00000394957 U2SURPO15042 1029 aaKnown RBP18.7■□□□□ 0.58
VSIR-201ENST00000394957 CD109Q6YHK3 1445 aa18.69■□□□□ 0.58
VSIR-201ENST00000394957 TIAM1Q13009 1591 aa18.68■□□□□ 0.58
VSIR-201ENST00000394957 POGZQ7Z3K3 1410 aa18.68■□□□□ 0.58
VSIR-201ENST00000394957 AEBP2Q6ZN18 517 aaPredicted RBP18.67■□□□□ 0.58
VSIR-201ENST00000394957 NUTM2DQ5VT03 806 aaPredicted RBP18.66■□□□□ 0.58
VSIR-201ENST00000394957 C9orf84Q5VXU9 1444 aa18.66■□□□□ 0.58
VSIR-201ENST00000394957 USP35Q9P2H5 1018 aa18.66■□□□□ 0.58
VSIR-201ENST00000394957 TERF2IPQ9NYB0 399 aa18.65■□□□□ 0.58
VSIR-201ENST00000394957 MORC1Q86VD1 984 aa18.65■□□□□ 0.58
VSIR-201ENST00000394957 CDK13Q14004 1512 aaKnown RBP18.65■□□□□ 0.58
VSIR-201ENST00000394957 SUPT6HQ7KZ85 1726 aaKnown RBP18.63■□□□□ 0.57
VSIR-201ENST00000394957 RAPGEF3O95398 923 aa18.63■□□□□ 0.57
VSIR-201ENST00000394957 DHX57Q6P158 1386 aaKnown RBP18.63■□□□□ 0.57
VSIR-201ENST00000394957 RRBP1Q9P2E9 1410 aaKnown RBP18.63■□□□□ 0.57
VSIR-201ENST00000394957 CDK11BP21127 795 aaKnown RBP18.62■□□□□ 0.57
VSIR-201ENST00000394957 CCER2I3L3R5 266 aa18.61■□□□□ 0.57
VSIR-201ENST00000394957 TAF7LQ5H9L4 462 aa18.61■□□□□ 0.57
VSIR-201ENST00000394957 PAK3O75914 559 aaPredicted RBP18.59■□□□□ 0.57
VSIR-201ENST00000394957 TRAK1Q9UPV9 953 aa18.59■□□□□ 0.57
VSIR-201ENST00000394957 ADAMTS12P58397 1594 aa18.59■□□□□ 0.57
VSIR-201ENST00000394957 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.59■□□□□ 0.57
VSIR-201ENST00000394957 NGDNQ8NEJ9 315 aaKnown RBP18.59■□□□□ 0.57
VSIR-201ENST00000394957 SOX12O15370 315 aa18.58■□□□□ 0.57
VSIR-201ENST00000394957 EIF4G3O43432 1585 aaKnown RBP18.58■□□□□ 0.57
VSIR-201ENST00000394957 MAP3K1Q13233 1512 aa18.57■□□□□ 0.56
VSIR-201ENST00000394957 KIF14Q15058 1648 aa18.57■□□□□ 0.56
VSIR-201ENST00000394957 PCF11O94913 1555 aaKnown RBP18.56■□□□□ 0.56
VSIR-201ENST00000394957 ARHGEF11O15085 1522 aa18.56■□□□□ 0.56
VSIR-201ENST00000394957 GOLGA6L22H0YM25 854 aa18.56■□□□□ 0.56
VSIR-201ENST00000394957 WDR97A6NE52 1622 aa18.56■□□□□ 0.56
VSIR-201ENST00000394957 KTN1Q86UP2 1357 aaKnown RBP18.55■□□□□ 0.56
VSIR-201ENST00000394957 TPRNQ4KMQ1 711 aa18.54■□□□□ 0.56
VSIR-201ENST00000394957 SLC52A1Q9NWF4 448 aa18.54■□□□□ 0.56
VSIR-201ENST00000394957 CCDC141Q6ZP82 1450 aa18.54■□□□□ 0.56
VSIR-201ENST00000394957 HFM1A2PYH4 1435 aa18.53■□□□□ 0.56
VSIR-201ENST00000394957 DAPK1P53355 1430 aa18.53■□□□□ 0.56
VSIR-201ENST00000394957 ADGRL1O94910 1474 aa18.53■□□□□ 0.56
VSIR-201ENST00000394957 THEMISQ8N1K5 641 aaPredicted RBP18.52■□□□□ 0.56
VSIR-201ENST00000394957 EVC2Q86UK5 1308 aa18.52■□□□□ 0.56
VSIR-201ENST00000394957 RRP9O43818 475 aaKnown RBP18.52■□□□□ 0.56
VSIR-201ENST00000394957 TRIM44Q96DX7 344 aaPredicted RBP18.52■□□□□ 0.55
VSIR-201ENST00000394957 MSH5O43196 834 aa18.5■□□□□ 0.55
VSIR-201ENST00000394957 UGGT2Q9NYU1 1516 aa18.5■□□□□ 0.55
VSIR-201ENST00000394957 NUP160Q12769 1436 aa18.49■□□□□ 0.55
VSIR-201ENST00000394957 RBM10P98175 930 aaKnown RBP18.49■□□□□ 0.55
VSIR-201ENST00000394957 RALBP1Q15311 655 aa18.49■□□□□ 0.55
VSIR-201ENST00000394957 CASC1Q6TDU7 716 aa18.49■□□□□ 0.55
VSIR-201ENST00000394957 NCBP3Q53F19 620 aaKnown RBP18.49■□□□□ 0.55
VSIR-201ENST00000394957 ROCK1Q13464 1354 aa18.48■□□□□ 0.55
VSIR-201ENST00000394957 DENND4BO75064 1496 aaPredicted RBP18.48■□□□□ 0.55
VSIR-201ENST00000394957 CSB-PGBD3P0DP91 1061 aa18.47■□□□□ 0.55
VSIR-201ENST00000394957 ST20-MTHFSA0A0A6YYL1 179 aa18.46■□□□□ 0.55
VSIR-201ENST00000394957 MS4A1P11836 297 aa18.46■□□□□ 0.55
VSIR-201ENST00000394957 TEX14Q8IWB6 1497 aa18.46■□□□□ 0.55
VSIR-201ENST00000394957 TXNDC2Q86VQ3 553 aa18.45■□□□□ 0.54
VSIR-201ENST00000394957 IPO9Q96P70 1041 aaKnown RBP18.45■□□□□ 0.54
VSIR-201ENST00000394957 FGD1P98174 961 aa18.45■□□□□ 0.54
VSIR-201ENST00000394957 THOC2Q8NI27 1593 aaKnown RBP18.45■□□□□ 0.54
VSIR-201ENST00000394957 FANCAO15360 1455 aa18.44■□□□□ 0.54
VSIR-201ENST00000394957 ASXL2Q76L83 1435 aa18.44■□□□□ 0.54
VSIR-201ENST00000394957 RAPGEF6Q8TEU7 1601 aa18.43■□□□□ 0.54
VSIR-201ENST00000394957 CAMSAP2Q08AD1 1489 aa18.43■□□□□ 0.54
VSIR-201ENST00000394957 ATP10BO94823 1461 aa18.43■□□□□ 0.54
VSIR-201ENST00000394957 PPP6R1Q9UPN7 881 aa18.43■□□□□ 0.54
VSIR-201ENST00000394957 NUTM2FA1L443 756 aa18.42■□□□□ 0.54
VSIR-201ENST00000394957 FAM43AQ8N2R8 423 aa18.42■□□□□ 0.54
VSIR-201ENST00000394957 CHMP4BQ9H444 224 aaKnown RBP18.42■□□□□ 0.54
VSIR-201ENST00000394957 RTF1Q92541 710 aaKnown RBP18.41■□□□□ 0.54
VSIR-201ENST00000394957 OS9Q13438 667 aaPredicted RBP18.41■□□□□ 0.54
VSIR-201ENST00000394957 MINK1Q8N4C8 1332 aaPredicted RBP18.41■□□□□ 0.54
VSIR-201ENST00000394957 AKNAQ7Z591 1439 aa18.41■□□□□ 0.54
VSIR-201ENST00000394957 KIAA1107Q9UPP5 1409 aa18.41■□□□□ 0.54
VSIR-201ENST00000394957 U2AF1L5P0DN76 240 aaPredicted RBP18.41■□□□□ 0.54
VSIR-201ENST00000394957 U2AF1Q01081 240 aaKnown RBP eCLIP18.41■□□□□ 0.54
VSIR-201ENST00000394957 USP47Q96K76 1375 aa18.4■□□□□ 0.54
VSIR-201ENST00000394957 CENPJQ9HC77 1338 aaPredicted RBP18.4■□□□□ 0.54
VSIR-201ENST00000394957 RCAN3Q9UKA8 241 aa18.4■□□□□ 0.54
VSIR-201ENST00000394957 CTTNBP2Q8WZ74 1663 aa18.39■□□□□ 0.54
VSIR-201ENST00000394957 L1TD1Q5T7N2 865 aaKnown RBP18.39■□□□□ 0.53
VSIR-201ENST00000394957 BCL11BQ9C0K0 894 aaPredicted RBP18.39■□□□□ 0.53
VSIR-201ENST00000394957 KIAA0556O60303 1618 aa18.39■□□□□ 0.53
VSIR-201ENST00000394957 ATF3P18847 181 aa18.38■□□□□ 0.53
VSIR-201ENST00000394957 TAOK2Q9UL54 1235 aa18.38■□□□□ 0.53
VSIR-201ENST00000394957 RPGRIP1LQ68CZ1 1315 aa18.38■□□□□ 0.53
VSIR-201ENST00000394957 ABCA5Q8WWZ7 1642 aa18.38■□□□□ 0.53
VSIR-201ENST00000394957 WDR7Q9Y4E6 1490 aa18.38■□□□□ 0.53
VSIR-201ENST00000394957 PTMAP06454 111 aaKnown RBP18.38■□□□□ 0.53
VSIR-201ENST00000394957 HSP90AB1P08238 724 aaKnown RBP18.38■□□□□ 0.53
VSIR-201ENST00000394957 GSE1Q14687 1217 aa18.38■□□□□ 0.53
VSIR-201ENST00000394957 ANKLE2Q86XL3 938 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms