RNA–Protein interactions for RNA: ENST00000394839.6

PRKACB-208, Transcript of protein kinase cAMP-activated catalytic subunit beta, human

TSL 2 BASIC

Gene PRKACB, Length 4,200 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKACB-208	ENST00000394839	NLRP1	Q9C000	1473 aa		6.71	□□□□□ -1.34
PRKACB-208	ENST00000394839	STAG3	Q9UJ98	1225 aa		6.71	□□□□□ -1.34
PRKACB-208	ENST00000394839	KANK1	Q14678	1352 aa		6.7	□□□□□ -1.34
PRKACB-208	ENST00000394839	CEP162	Q5TB80	1403 aa		6.7	□□□□□ -1.34
PRKACB-208	ENST00000394839	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	6.7	□□□□□ -1.34
PRKACB-208	ENST00000394839	ADGB	Q8N7X0	1667 aa		6.7	□□□□□ -1.34
PRKACB-208	ENST00000394839	CDC42BPB	Q9Y5S2	1711 aa		6.69	□□□□□ -1.34
PRKACB-208	ENST00000394839	HDGF	P51858	240 aa	Known RBP	6.69	□□□□□ -1.34
PRKACB-208	ENST00000394839	KDM5D	Q9BY66	1539 aa		6.69	□□□□□ -1.34
PRKACB-208	ENST00000394839	KIDINS220	Q9ULH0	1771 aa		6.68	□□□□□ -1.34
PRKACB-208	ENST00000394839	INO80	Q9ULG1	1556 aa	Predicted RBP	6.68	□□□□□ -1.34
PRKACB-208	ENST00000394839	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	6.68	□□□□□ -1.34
PRKACB-208	ENST00000394839	PIP4K2B	P78356	416 aa		6.68	□□□□□ -1.34
PRKACB-208	ENST00000394839	PZP	P20742	1482 aa		6.68	□□□□□ -1.34
PRKACB-208	ENST00000394839	MSH5	O43196	834 aa		6.68	□□□□□ -1.34
PRKACB-208	ENST00000394839	NPM3	O75607	178 aa	Known RBP	6.68	□□□□□ -1.34
PRKACB-208	ENST00000394839	ZNF142	P52746	1687 aa	Predicted RBP	6.67	□□□□□ -1.34
PRKACB-208	ENST00000394839	TCOF1	Q13428	1488 aa	Known RBP	6.67	□□□□□ -1.34
PRKACB-208	ENST00000394839	CDC42BPA	Q5VT25	1732 aa		6.67	□□□□□ -1.34
PRKACB-208	ENST00000394839	LTBP4	Q8N2S1	1624 aa		6.67	□□□□□ -1.34
PRKACB-208	ENST00000394839	MYO3A	Q8NEV4	1616 aa		6.67	□□□□□ -1.34
PRKACB-208	ENST00000394839	SUPT6H	Q7KZ85	1726 aa	Known RBP	6.67	□□□□□ -1.34
PRKACB-208	ENST00000394839	NPHP4	O75161	1426 aa	Predicted RBP	6.67	□□□□□ -1.34
PRKACB-208	ENST00000394839	PLXNC1	O60486	1568 aa		6.66	□□□□□ -1.34
PRKACB-208	ENST00000394839	CLTC	Q00610	1675 aa	Known RBP	6.66	□□□□□ -1.34
PRKACB-208	ENST00000394839	MIA2	Q96PC5	1412 aa		6.66	□□□□□ -1.34
PRKACB-208	ENST00000394839	CNKSR2	Q8WXI2	1034 aa		6.66	□□□□□ -1.34
PRKACB-208	ENST00000394839	SHANK2	Q9UPX8	1470 aa		6.66	□□□□□ -1.34
PRKACB-208	ENST00000394839	STRC	Q7RTU9	1775 aa		6.66	□□□□□ -1.34
PRKACB-208	ENST00000394839	SIGLEC1	Q9BZZ2	1709 aa		6.64	□□□□□ -1.35
PRKACB-208	ENST00000394839	BCAN	Q96GW7	911 aa		6.64	□□□□□ -1.35
PRKACB-208	ENST00000394839	CAMSAP2	Q08AD1	1489 aa		6.64	□□□□□ -1.35
PRKACB-208	ENST00000394839	MYOM3	Q5VTT5	1437 aa		6.64	□□□□□ -1.35
PRKACB-208	ENST00000394839	NCOA2	Q15596	1464 aa		6.64	□□□□□ -1.35
PRKACB-208	ENST00000394839	UGGT1	Q9NYU2	1555 aa		6.64	□□□□□ -1.35
PRKACB-208	ENST00000394839	ARHGEF5	Q12774	1597 aa		6.64	□□□□□ -1.35
PRKACB-208	ENST00000394839	TIAM1	Q13009	1591 aa		6.63	□□□□□ -1.35
PRKACB-208	ENST00000394839	ILDR2	Q71H61	639 aa		6.62	□□□□□ -1.35
PRKACB-208	ENST00000394839	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	6.62	□□□□□ -1.35
PRKACB-208	ENST00000394839	PPP1R15A	O75807	674 aa	Predicted RBP	6.62	□□□□□ -1.35
PRKACB-208	ENST00000394839	HSPA1L	P34931	641 aa		6.62	□□□□□ -1.35
PRKACB-208	ENST00000394839	ZC3H13	Q5T200	1668 aa	Known RBP	6.62	□□□□□ -1.35
PRKACB-208	ENST00000394839	MBD5	Q9P267	1494 aa		6.62	□□□□□ -1.35
PRKACB-208	ENST00000394839	TXNDC2	Q86VQ3	553 aa		6.61	□□□□□ -1.35
PRKACB-208	ENST00000394839	LRRC9	Q6ZRR7	1453 aa		6.61	□□□□□ -1.35
PRKACB-208	ENST00000394839	VPS8	Q8N3P4	1428 aa		6.61	□□□□□ -1.35
PRKACB-208	ENST00000394839	ANKRD30A	Q9BXX3	1397 aa		6.61	□□□□□ -1.35
PRKACB-208	ENST00000394839	DNMT1	P26358	1616 aa	Known RBP	6.61	□□□□□ -1.35
PRKACB-208	ENST00000394839	SYNM	O15061	1565 aa		6.61	□□□□□ -1.35
PRKACB-208	ENST00000394839	DUOX2	Q9NRD8	1548 aa		6.61	□□□□□ -1.35
PRKACB-208	ENST00000394839	MED14	O60244	1454 aa		6.61	□□□□□ -1.35
PRKACB-208	ENST00000394839	ZNF644	Q9H582	1327 aa	Predicted RBP	6.6	□□□□□ -1.35
PRKACB-208	ENST00000394839	FBXO31	Q5XUX0	539 aa	Predicted RBP	6.6	□□□□□ -1.35
PRKACB-208	ENST00000394839	SCAF11	Q99590	1463 aa	Known RBP	6.6	□□□□□ -1.35
PRKACB-208	ENST00000394839	DEPDC5	O75140	1603 aa		6.6	□□□□□ -1.35
PRKACB-208	ENST00000394839	EIF2AK4	Q9P2K8	1649 aa	Known RBP	6.6	□□□□□ -1.35
PRKACB-208	ENST00000394839	MAP3K1	Q13233	1512 aa		6.6	□□□□□ -1.35
PRKACB-208	ENST00000394839	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	6.6	□□□□□ -1.35
PRKACB-208	ENST00000394839	ERBIN	Q96RT1	1412 aa		6.6	□□□□□ -1.35
PRKACB-208	ENST00000394839	POLR1A	O95602	1720 aa	Predicted RBP	6.6	□□□□□ -1.35
PRKACB-208	ENST00000394839	MAST1	Q9Y2H9	1570 aa		6.59	□□□□□ -1.35
PRKACB-208	ENST00000394839	ERVK-7	P63135	1459 aa		6.59	□□□□□ -1.35
PRKACB-208	ENST00000394839	C14orf37	Q86TY3	774 aa		6.59	□□□□□ -1.35
PRKACB-208	ENST00000394839	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	6.59	□□□□□ -1.35
PRKACB-208	ENST00000394839	SLC52A1	Q9NWF4	448 aa		6.59	□□□□□ -1.35
PRKACB-208	ENST00000394839	KIF15	Q9NS87	1388 aa		6.59	□□□□□ -1.35
PRKACB-208	ENST00000394839	LRRIQ1	Q96JM4	1722 aa		6.59	□□□□□ -1.36
PRKACB-208	ENST00000394839	MSH6	P52701	1360 aa		6.58	□□□□□ -1.36
PRKACB-208	ENST00000394839	ARHGAP31	Q2M1Z3	1444 aa		6.58	□□□□□ -1.36
PRKACB-208	ENST00000394839	RNF17	Q9BXT8	1623 aa	Known RBP	6.58	□□□□□ -1.36
PRKACB-208	ENST00000394839	PROSER2	Q86WR7	435 aa	Predicted RBP	6.58	□□□□□ -1.36
PRKACB-208	ENST00000394839	MED1	Q15648	1581 aa	Predicted RBP	6.58	□□□□□ -1.36
PRKACB-208	ENST00000394839	ABCC3	O15438	1527 aa		6.58	□□□□□ -1.36
PRKACB-208	ENST00000394839	MEX3C	Q5U5Q3	659 aa	Known RBP	6.57	□□□□□ -1.36
PRKACB-208	ENST00000394839	KCNA6	P17658	529 aa		6.57	□□□□□ -1.36
PRKACB-208	ENST00000394839	IQGAP1	P46940	1657 aa		6.57	□□□□□ -1.36
PRKACB-208	ENST00000394839	TMEM2	Q9UHN6	1383 aa		6.55	□□□□□ -1.36
PRKACB-208	ENST00000394839	FAM135B	Q49AJ0	1406 aa		6.55	□□□□□ -1.36
PRKACB-208	ENST00000394839	ATF3	P18847	181 aa		6.54	□□□□□ -1.36
PRKACB-208	ENST00000394839	RRP7BP	Q9NSQ0	103 aa		6.54	□□□□□ -1.36
PRKACB-208	ENST00000394839	NKTR	P30414	1462 aa	Known RBP	6.54	□□□□□ -1.36
PRKACB-208	ENST00000394839	LRRC7	Q96NW7	1537 aa		6.54	□□□□□ -1.36
PRKACB-208	ENST00000394839	VWDE	Q8N2E2	1590 aa		6.54	□□□□□ -1.36
PRKACB-208	ENST00000394839	NEURL4	Q96JN8	1562 aa		6.54	□□□□□ -1.36
PRKACB-208	ENST00000394839	EFCAB6	Q5THR3	1501 aa		6.54	□□□□□ -1.36
PRKACB-208	ENST00000394839	SLIT1	O75093	1534 aa		6.53	□□□□□ -1.36
PRKACB-208	ENST00000394839	CHGA	P10645	457 aa	Known RBP	6.53	□□□□□ -1.36
PRKACB-208	ENST00000394839	ZNF772	Q68DY9	489 aa	Predicted RBP	6.53	□□□□□ -1.36
PRKACB-208	ENST00000394839	JCAD	Q9P266	1359 aa		6.53	□□□□□ -1.36
PRKACB-208	ENST00000394839	CADPS2	Q86UW7	1296 aa		6.53	□□□□□ -1.36
PRKACB-208	ENST00000394839	ARHGAP23	Q9P227	1491 aa		6.53	□□□□□ -1.36
PRKACB-208	ENST00000394839	NCOA3	Q9Y6Q9	1424 aa		6.53	□□□□□ -1.36
PRKACB-208	ENST00000394839	FAM50A	Q14320	339 aa	Known RBP	6.53	□□□□□ -1.36
PRKACB-208	ENST00000394839	RPRD2	Q5VT52	1461 aa	Known RBP	6.52	□□□□□ -1.37
PRKACB-208	ENST00000394839	TMEM94	Q12767	1356 aa		6.52	□□□□□ -1.37
PRKACB-208	ENST00000394839	PRDM15	P57071	1507 aa	Predicted RBP	6.52	□□□□□ -1.37
PRKACB-208	ENST00000394839	SPATA31A6	Q5VVP1	1343 aa		6.52	□□□□□ -1.37
PRKACB-208	ENST00000394839	DAPK1	P53355	1430 aa		6.51	□□□□□ -1.37
PRKACB-208	ENST00000394839	PIK3R4	Q99570	1358 aa		6.51	□□□□□ -1.37
PRKACB-208	ENST00000394839	LMTK2	Q8IWU2	1503 aa		6.51	□□□□□ -1.37

Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms