RNA–Protein interactions for RNA: ENST00000394839.6

PRKACB-208, Transcript of protein kinase cAMP-activated catalytic subunit beta, humanhuman

TSL 2 BASIC

Gene PRKACB, Length 4,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKACB-208ENST00000394839 NISCHQ9Y2I1 1504 aa10.42□□□□□ -0.74
PRKACB-208ENST00000394839 ABCC9O60706 1549 aa9.45□□□□□ -0.9
PRKACB-208ENST00000394839 CCDC180Q9P1Z9 1646 aa9.42□□□□□ -0.9
PRKACB-208ENST00000394839 CHIC1Q5VXU3 224 aa9.36□□□□□ -0.91
PRKACB-208ENST00000394839 AEBP2Q6ZN18 517 aaPredicted RBP9.21□□□□□ -0.94
PRKACB-208ENST00000394839 RB1CC1Q8TDY2 1594 aa9.06□□□□□ -0.96
PRKACB-208ENST00000394839 NACADO15069 1562 aa8.97□□□□□ -0.97
PRKACB-208ENST00000394839 DCAF8L2P0C7V8 631 aa8.93□□□□□ -0.98
PRKACB-208ENST00000394839 MYO15BQ96JP2 1530 aa8.82□□□□□ -1
PRKACB-208ENST00000394839 PABPN1Q86U42 306 aaKnown RBP eCLIP8.77□□□□□ -1.01
PRKACB-208ENST00000394839 DNAJC5BQ9UF47 199 aa8.76□□□□□ -1.01
PRKACB-208ENST00000394839 SHROOM4Q9ULL8 1493 aa8.75□□□□□ -1.01
PRKACB-208ENST00000394839 DCAF1Q9Y4B6 1507 aa8.66□□□□□ -1.02
PRKACB-208ENST00000394839 ZCCHC6Q5VYS8 1495 aaKnown RBP8.61□□□□□ -1.03
PRKACB-208ENST00000394839 BICRAQ9NZM4 1560 aa8.58□□□□□ -1.04
PRKACB-208ENST00000394839 CECR2Q9BXF3 1484 aa8.57□□□□□ -1.04
PRKACB-208ENST00000394839 UNC13AQ9UPW8 1703 aa8.57□□□□□ -1.04
PRKACB-208ENST00000394839 SCRIBQ14160 1630 aa8.51□□□□□ -1.05
PRKACB-208ENST00000394839 CC2D2AQ9P2K1 1620 aa8.5□□□□□ -1.05
PRKACB-208ENST00000394839 EIF4G1Q04637 1599 aaKnown RBP8.49□□□□□ -1.05
PRKACB-208ENST00000394839 ERCC6Q03468 1493 aa8.31□□□□□ -1.08
PRKACB-208ENST00000394839 DNAJC5Q9H3Z4 198 aa8.3□□□□□ -1.08
PRKACB-208ENST00000394839 CUX2O14529 1486 aa8.3□□□□□ -1.08
PRKACB-208ENST00000394839 SMARCA2P51531 1590 aa8.25□□□□□ -1.09
PRKACB-208ENST00000394839 NCAPD3P42695 1498 aa8.24□□□□□ -1.09
PRKACB-208ENST00000394839 HMGXB3Q12766 1538 aa8.19□□□□□ -1.1
PRKACB-208ENST00000394839 ATAD2BQ9ULI0 1458 aa8.18□□□□□ -1.1
PRKACB-208ENST00000394839 PHF23Q9BUL5 403 aaPredicted RBP8.17□□□□□ -1.1
PRKACB-208ENST00000394839 BAZ1BQ9UIG0 1483 aaKnown RBP8.17□□□□□ -1.1
PRKACB-208ENST00000394839 BAZ1AQ9NRL2 1556 aaPredicted RBP8.16□□□□□ -1.1
PRKACB-208ENST00000394839 PDS5BQ9NTI5 1447 aa8.14□□□□□ -1.11
PRKACB-208ENST00000394839 SMARCA4P51532 1647 aa8.13□□□□□ -1.11
PRKACB-208ENST00000394839 LAMC3Q9Y6N6 1575 aa8.1□□□□□ -1.11
PRKACB-208ENST00000394839 PEG3Q9GZU2 1588 aa8.05□□□□□ -1.12
PRKACB-208ENST00000394839 CADPSQ9ULU8 1353 aa8.02□□□□□ -1.13
PRKACB-208ENST00000394839 MRC2Q9UBG0 1479 aa8.01□□□□□ -1.13
PRKACB-208ENST00000394839 NESP48681 1621 aa8.01□□□□□ -1.13
PRKACB-208ENST00000394839 THOC2Q8NI27 1593 aaKnown RBP7.98□□□□□ -1.13
PRKACB-208ENST00000394839 CEP164Q9UPV0 1460 aa7.97□□□□□ -1.13
PRKACB-208ENST00000394839 TRIM41Q8WV44 630 aa7.95□□□□□ -1.14
PRKACB-208ENST00000394839 MROH2BQ7Z745 1585 aa7.95□□□□□ -1.14
PRKACB-208ENST00000394839 SENP3Q9H4L4 574 aaPredicted RBP7.95□□□□□ -1.14
PRKACB-208ENST00000394839 OSCARQ8IYS5 282 aa7.92□□□□□ -1.14
PRKACB-208ENST00000394839 WDR62O43379 1518 aa7.92□□□□□ -1.14
PRKACB-208ENST00000394839 FANCD2Q9BXW9 1451 aa7.91□□□□□ -1.14
PRKACB-208ENST00000394839 KIF21AQ7Z4S6 1674 aa7.9□□□□□ -1.15
PRKACB-208ENST00000394839 CFTRP13569 1480 aa7.86□□□□□ -1.15
PRKACB-208ENST00000394839 ABCC8Q09428 1581 aa7.86□□□□□ -1.15
PRKACB-208ENST00000394839 TOP2AP11388 1531 aaKnown RBP7.85□□□□□ -1.15
PRKACB-208ENST00000394839 PLPPR3Q6T4P5 718 aa7.83□□□□□ -1.16
PRKACB-208ENST00000394839 IFT140Q96RY7 1462 aa7.83□□□□□ -1.16
PRKACB-208ENST00000394839 WIZO95785 1651 aa7.82□□□□□ -1.16
PRKACB-208ENST00000394839 RSF1Q96T23 1441 aaPredicted RBP7.81□□□□□ -1.16
PRKACB-208ENST00000394839 URB2Q14146 1524 aaKnown RBP7.76□□□□□ -1.17
PRKACB-208ENST00000394839 PRDM2Q13029 1718 aa7.73□□□□□ -1.17
PRKACB-208ENST00000394839 FBLN2P98095 1184 aa7.72□□□□□ -1.17
PRKACB-208ENST00000394839 TOPBP1Q92547 1522 aa7.72□□□□□ -1.17
PRKACB-208ENST00000394839 DNMBPQ6XZF7 1577 aa7.72□□□□□ -1.17
PRKACB-208ENST00000394839 TRHP20396 242 aaPredicted RBP7.71□□□□□ -1.17
PRKACB-208ENST00000394839 CCDC88BA6NC98 1476 aa7.71□□□□□ -1.18
PRKACB-208ENST00000394839 WDR97A6NE52 1622 aa7.69□□□□□ -1.18
PRKACB-208ENST00000394839 CHMP7Q8WUX9 453 aaPredicted RBP7.68□□□□□ -1.18
PRKACB-208ENST00000394839 ARHGEF11O15085 1522 aa7.68□□□□□ -1.18
PRKACB-208ENST00000394839 CYB5RLQ6IPT4 315 aa7.67□□□□□ -1.18
PRKACB-208ENST00000394839 RIMBP3CA6NJZ7 1639 aa7.67□□□□□ -1.18
PRKACB-208ENST00000394839 RIMBP3BA6NNM3 1639 aa7.67□□□□□ -1.18
PRKACB-208ENST00000394839 RIMBP3Q9UFD9 1639 aa7.67□□□□□ -1.18
PRKACB-208ENST00000394839 SOGA1O94964 1423 aa7.65□□□□□ -1.18
PRKACB-208ENST00000394839 EIF4G3O43432 1585 aaKnown RBP7.65□□□□□ -1.18
PRKACB-208ENST00000394839 ZNF608Q9ULD9 1512 aaPredicted RBP7.65□□□□□ -1.18
PRKACB-208ENST00000394839 SYNJ1O43426 1573 aa7.64□□□□□ -1.19
PRKACB-208ENST00000394839 MAGI1Q96QZ7 1491 aaPredicted RBP7.64□□□□□ -1.19
PRKACB-208ENST00000394839 GRIN2BQ13224 1484 aa7.62□□□□□ -1.19
PRKACB-208ENST00000394839 AQRO60306 1485 aaKnown RBP eCLIP7.62□□□□□ -1.19
PRKACB-208ENST00000394839 POLA1P09884 1462 aaPredicted RBP7.62□□□□□ -1.19
PRKACB-208ENST00000394839 SNAPC4Q5SXM2 1469 aa7.59□□□□□ -1.19
PRKACB-208ENST00000394839 TDRD9Q8NDG6 1382 aaKnown RBP7.59□□□□□ -1.19
PRKACB-208ENST00000394839 SYNJ2O15056 1496 aa7.59□□□□□ -1.2
PRKACB-208ENST00000394839 FGD5Q6ZNL6 1462 aa7.58□□□□□ -1.2
PRKACB-208ENST00000394839 TARBP1Q13395 1621 aaKnown RBP7.57□□□□□ -1.2
PRKACB-208ENST00000394839 ARAP1Q96P48 1450 aa7.57□□□□□ -1.2
PRKACB-208ENST00000394839 CHD1O14646 1710 aa7.57□□□□□ -1.2
PRKACB-208ENST00000394839 NPM1P06748 294 aaKnown RBP eCLIP7.56□□□□□ -1.2
PRKACB-208ENST00000394839 GAPVD1Q14C86 1478 aa7.55□□□□□ -1.2
PRKACB-208ENST00000394839 RAD54L2Q9Y4B4 1467 aa7.55□□□□□ -1.2
PRKACB-208ENST00000394839 WRNQ14191 1432 aaPredicted RBP eCLIP7.54□□□□□ -1.2
PRKACB-208ENST00000394839 CLASP1Q7Z460 1538 aa7.52□□□□□ -1.21
PRKACB-208ENST00000394839 ABCA10Q8WWZ4 1543 aa7.51□□□□□ -1.21
PRKACB-208ENST00000394839 CUX1P39880 1505 aa7.5□□□□□ -1.21
PRKACB-208ENST00000394839 FHAD1B1AJZ9 1412 aa7.49□□□□□ -1.21
PRKACB-208ENST00000394839 SUPT5HO00267 1087 aaKnown RBP7.48□□□□□ -1.21
PRKACB-208ENST00000394839 FAM9AQ8IZU1 332 aaPredicted RBP7.48□□□□□ -1.21
PRKACB-208ENST00000394839 GRIN2AQ12879 1464 aa7.47□□□□□ -1.21
PRKACB-208ENST00000394839 PBRM1Q86U86 1689 aa7.46□□□□□ -1.22
PRKACB-208ENST00000394839 ERICH3Q5RHP9 1530 aa7.44□□□□□ -1.22
PRKACB-208ENST00000394839 NUP160Q12769 1436 aa7.44□□□□□ -1.22
PRKACB-208ENST00000394839 ABCA5Q8WWZ7 1642 aa7.44□□□□□ -1.22
PRKACB-208ENST00000394839 ADAMTS12P58397 1594 aa7.43□□□□□ -1.22
PRKACB-208ENST00000394839 JPH4Q96JJ6 628 aa7.41□□□□□ -1.22
PRKACB-208ENST00000394839 PRG4Q92954 1404 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms