RNA–Protein interactions for RNA: ENST00000394185.6

CLDND1-204, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLDND1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-204ENST00000394185 ZNF326Q5BKZ1 582 aaKnown RBP25.4■■□□□ 1.66
CLDND1-204ENST00000394185 DHX29Q7Z478 1369 aaKnown RBP25.38■■□□□ 1.65
CLDND1-204ENST00000394185 KIF3BO15066 747 aa25.38■■□□□ 1.65
CLDND1-204ENST00000394185 RAPGEF3O95398 923 aa25.38■■□□□ 1.65
CLDND1-204ENST00000394185 CCDC144AA2RUR9 1427 aa25.38■■□□□ 1.65
CLDND1-204ENST00000394185 MAP3K4Q9Y6R4 1608 aa25.38■■□□□ 1.65
CLDND1-204ENST00000394185 KDM5CP41229 1560 aa25.37■■□□□ 1.65
CLDND1-204ENST00000394185 DEPDC5O75140 1603 aa25.37■■□□□ 1.65
CLDND1-204ENST00000394185 EIF4G2P78344 907 aaKnown RBP eCLIP25.35■■□□□ 1.65
CLDND1-204ENST00000394185 NEO1Q92859 1461 aa25.35■■□□□ 1.65
CLDND1-204ENST00000394185 FAM69CQ0P6D2 419 aa25.33■■□□□ 1.65
CLDND1-204ENST00000394185 KDM2AQ9Y2K7 1162 aa25.33■■□□□ 1.65
CLDND1-204ENST00000394185 DCAF11Q8TEB1 546 aa25.31■■□□□ 1.64
CLDND1-204ENST00000394185 MROH1Q8NDA8 1641 aa25.31■■□□□ 1.64
CLDND1-204ENST00000394185 E9PCH4 1651 aa25.31■■□□□ 1.64
CLDND1-204ENST00000394185 GLI2P10070 1586 aa25.31■■□□□ 1.64
CLDND1-204ENST00000394185 YTHDC1Q96MU7 727 aaKnown RBP25.31■■□□□ 1.64
CLDND1-204ENST00000394185 MLH3Q9UHC1 1453 aa25.31■■□□□ 1.64
CLDND1-204ENST00000394185 RGL3Q3MIN7 710 aa25.3■■□□□ 1.64
CLDND1-204ENST00000394185 DIP2BQ9P265 1576 aa25.3■■□□□ 1.64
CLDND1-204ENST00000394185 HECW2Q9P2P5 1572 aa25.3■■□□□ 1.64
CLDND1-204ENST00000394185 EIF2AK4Q9P2K8 1649 aaKnown RBP25.29■■□□□ 1.64
CLDND1-204ENST00000394185 ATP10AO60312 1499 aa25.29■■□□□ 1.64
CLDND1-204ENST00000394185 A2MP01023 1474 aa25.29■■□□□ 1.64
CLDND1-204ENST00000394185 VWDEQ8N2E2 1590 aa25.28■■□□□ 1.64
CLDND1-204ENST00000394185 FRMPD1Q5SYB0 1578 aa25.28■■□□□ 1.64
CLDND1-204ENST00000394185 UHRF1BP1Q6BDS2 1440 aa25.28■■□□□ 1.64
CLDND1-204ENST00000394185 PRDM15P57071 1507 aaPredicted RBP25.27■■□□□ 1.64
CLDND1-204ENST00000394185 WASHC2AQ641Q2 1341 aa25.27■■□□□ 1.64
CLDND1-204ENST00000394185 SPATA31E1Q6ZUB1 1445 aa25.27■■□□□ 1.64
CLDND1-204ENST00000394185 ABCA6Q8N139 1617 aa25.26■■□□□ 1.63
CLDND1-204ENST00000394185 C11orf95C9JLR9 678 aaPredicted RBP25.25■■□□□ 1.63
CLDND1-204ENST00000394185 KANK1Q14678 1352 aa25.24■■□□□ 1.63
CLDND1-204ENST00000394185 TET3O43151 1660 aa25.23■■□□□ 1.63
CLDND1-204ENST00000394185 RICTORQ6R327 1708 aa25.22■■□□□ 1.63
CLDND1-204ENST00000394185 RALGAPBQ86X10 1494 aa25.2■■□□□ 1.63
CLDND1-204ENST00000394185 TSPOAP1O95153 1857 aa25.19■■□□□ 1.62
CLDND1-204ENST00000394185 PTPRTO14522 1441 aa25.19■■□□□ 1.62
CLDND1-204ENST00000394185 USP47Q96K76 1375 aa25.18■■□□□ 1.62
CLDND1-204ENST00000394185 TRPM2O94759 1503 aa25.18■■□□□ 1.62
CLDND1-204ENST00000394185 SPHKAPQ2M3C7 1700 aa25.17■■□□□ 1.62
CLDND1-204ENST00000394185 GGT6Q6P531 493 aa25.17■■□□□ 1.62
CLDND1-204ENST00000394185 YEATS2Q9ULM3 1422 aa25.17■■□□□ 1.62
CLDND1-204ENST00000394185 RNF17Q9BXT8 1623 aaKnown RBP25.17■■□□□ 1.62
CLDND1-204ENST00000394185 PPRC1Q5VV67 1664 aaKnown RBP25.17■■□□□ 1.62
CLDND1-204ENST00000394185 DIP2CQ9Y2E4 1556 aa25.17■■□□□ 1.62
CLDND1-204ENST00000394185 PRAG1Q86YV5 1406 aa25.16■■□□□ 1.62
CLDND1-204ENST00000394185 CLTCL1P53675 1640 aa25.15■■□□□ 1.62
CLDND1-204ENST00000394185 CARD11Q9BXL7 1154 aa25.14■■□□□ 1.62
CLDND1-204ENST00000394185 CEP152O94986 1710 aa25.13■■□□□ 1.61
CLDND1-204ENST00000394185 EFCAB6Q5THR3 1501 aa25.13■■□□□ 1.61
CLDND1-204ENST00000394185 CCDC7Q96M83 1385 aa25.13■■□□□ 1.61
CLDND1-204ENST00000394185 UGGT1Q9NYU2 1555 aa25.11■■□□□ 1.61
CLDND1-204ENST00000394185 ROCK2O75116 1388 aaKnown RBP25.1■■□□□ 1.61
CLDND1-204ENST00000394185 KIF7Q2M1P5 1343 aa25.1■■□□□ 1.61
CLDND1-204ENST00000394185 LMTK2Q8IWU2 1503 aa25.09■■□□□ 1.61
CLDND1-204ENST00000394185 NBPF1Q3BBV0 1214 aa25.09■■□□□ 1.61
CLDND1-204ENST00000394185 TRPM1Q7Z4N2 1603 aa25.09■■□□□ 1.61
CLDND1-204ENST00000394185 BCORL1Q5H9F3 1711 aa25.08■■□□□ 1.61
CLDND1-204ENST00000394185 CENPBP07199 599 aaPredicted RBP25.06■■□□□ 1.6
CLDND1-204ENST00000394185 KIF13AQ9H1H9 1805 aa25.05■■□□□ 1.6
CLDND1-204ENST00000394185 ANP32CO43423 234 aa25.05■■□□□ 1.6
CLDND1-204ENST00000394185 WASHC2CQ9Y4E1 1318 aa25.05■■□□□ 1.6
CLDND1-204ENST00000394185 NPATQ14207 1427 aa25.04■■□□□ 1.6
CLDND1-204ENST00000394185 ABCC3O15438 1527 aa25.03■■□□□ 1.6
CLDND1-204ENST00000394185 ST20-MTHFSA0A0A6YYL1 179 aa25.03■■□□□ 1.6
CLDND1-204ENST00000394185 ZMYM4Q5VZL5 1548 aa25.02■■□□□ 1.6
CLDND1-204ENST00000394185 CNTLNQ9NXG0 1405 aa25.01■■□□□ 1.59
CLDND1-204ENST00000394185 POLR1AO95602 1720 aaPredicted RBP25■■□□□ 1.59
CLDND1-204ENST00000394185 COL17A1Q9UMD9 1497 aaPredicted RBP24.99■■□□□ 1.59
CLDND1-204ENST00000394185 CFAP65Q6ZU64 1925 aaKnown RBP24.99■■□□□ 1.59
CLDND1-204ENST00000394185 GPRASP1Q5JY77 1395 aa24.98■■□□□ 1.59
CLDND1-204ENST00000394185 POLR3GLQ9BT43 218 aa24.97■■□□□ 1.59
CLDND1-204ENST00000394185 MADDQ8WXG6 1647 aa24.96■■□□□ 1.59
CLDND1-204ENST00000394185 CAMSAP1Q5T5Y3 1602 aa24.95■■□□□ 1.58
CLDND1-204ENST00000394185 MROH2AA6NES4 1674 aa24.93■■□□□ 1.58
CLDND1-204ENST00000394185 SIGLEC1Q9BZZ2 1709 aa24.93■■□□□ 1.58
CLDND1-204ENST00000394185 SCAF1Q9H7N4 1312 aaKnown RBP24.9■■□□□ 1.58
CLDND1-204ENST00000394185 CCER2I3L3R5 266 aa24.9■■□□□ 1.58
CLDND1-204ENST00000394185 KIF1BO60333 1816 aa24.9■■□□□ 1.58
CLDND1-204ENST00000394185 NEURL4Q96JN8 1562 aa24.89■■□□□ 1.58
CLDND1-204ENST00000394185 LAMC1P11047 1609 aa24.89■■□□□ 1.57
CLDND1-204ENST00000394185 CHGAP10645 457 aaKnown RBP24.88■■□□□ 1.57
CLDND1-204ENST00000394185 ADGRF5Q8IZF2 1346 aa24.86■■□□□ 1.57
CLDND1-204ENST00000394185 ADGRB3O60242 1522 aa24.86■■□□□ 1.57
CLDND1-204ENST00000394185 NOS1P29475 1434 aa24.86■■□□□ 1.57
CLDND1-204ENST00000394185 SYNMO15061 1565 aa24.85■■□□□ 1.57
CLDND1-204ENST00000394185 ZC3H13Q5T200 1668 aaKnown RBP24.84■■□□□ 1.57
CLDND1-204ENST00000394185 ARID4BQ4LE39 1312 aaPredicted RBP24.84■■□□□ 1.57
CLDND1-204ENST00000394185 TESK2Q96S53 571 aa24.83■■□□□ 1.57
CLDND1-204ENST00000394185 ARHGAP31Q2M1Z3 1444 aa24.82■■□□□ 1.56
CLDND1-204ENST00000394185 STAC3Q96MF2 364 aa24.82■■□□□ 1.56
CLDND1-204ENST00000394185 IFT172Q9UG01 1749 aa24.82■■□□□ 1.56
CLDND1-204ENST00000394185 MYOM2P54296 1465 aa24.81■■□□□ 1.56
CLDND1-204ENST00000394185 PRKRIP1Q9H875 184 aaPredicted RBP24.81■■□□□ 1.56
CLDND1-204ENST00000394185 REREQ9P2R6 1566 aa24.8■■□□□ 1.56
CLDND1-204ENST00000394185 CFAP70Q5T0N1 1121 aa24.8■■□□□ 1.56
CLDND1-204ENST00000394185 DISP3Q9P2K9 1392 aa24.79■■□□□ 1.56
CLDND1-204ENST00000394185 CNGB1Q14028 1251 aaPredicted RBP24.78■■□□□ 1.56
CLDND1-204ENST00000394185 MLECQ14165 292 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms